Factsheet for PGSC0003DMT400021662

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 9
extracellular 4
endoplasmic reticulum 4
vacuole 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g085670.1.1	Tomato	extracellular	98.24	98.24
KRH07655	Soybean	plasma membrane	76.56	76.32
KRH45351	Soybean	plasma membrane	75.93	75.54
VIT_08s0056g00100.t01	Wine grape	plasma membrane	75.1	75.34
AT1G79620.5	Thale cress	plasma membrane	72.51	70.11
GSMUA_Achr9P16880_001	Banana	plasma membrane	62.03	64.51
GSMUA_Achr3P09580_001	Banana	plasma membrane	63.07	63.33
TraesCS4A01G131500.1	Wheat	plasma membrane	62.45	62.32
TraesCS4D01G175200.2	Wheat	plasma membrane	62.34	62.15
HORVU4Hr1G051120.9	Barley	plasma membrane	62.14	61.94
KXG39452	Sorghum	plasma membrane	62.86	61.71
TraesCS4B01G173100.1	Wheat	plasma membrane	62.14	61.63
Os03t0329700-01	Rice	plasma membrane	62.03	61.33
Zm00001d029012_P002	Maize	plastid	61.72	56.4
GSMUA_Achr3P09570_001	Banana	plasma membrane	51.76	53.83
PGSC0003DMT400047023	Potato	plasma membrane	52.49	53.43
PGSC0003DMT400047024	Potato	plasma membrane	46.16	52.48
GSMUA_Achr9P16900_001	Banana	plasma membrane	50.83	52.41
OQU77613	Sorghum	plasma membrane	50.62	51.8
Os05t0305900-01	Rice	plasma membrane	50.31	51.43
Zm00001d010448_P003	Maize	plasma membrane	50.41	50.78
CDY49740	Canola	cytosol	71.58	49.43
TraesCS2A01G431100.2	Wheat	plasma membrane	49.48	49.28
TraesCS2D01G428900.1	Wheat	plasma membrane	49.27	49.07
GSMUA_Achr10P...	Banana	plasma membrane	47.1	49.03
TraesCS2B01G452400.2	Wheat	plasma membrane	49.27	49.02
Bra008427.1-P	Field mustard	cytosol	73.44	48.33
HORVU2Hr1G100620.3	Barley	cytosol	32.16	45.72
CDY22287	Canola	cytosol	73.03	40.95
PGSC0003DMT400071263	Potato	cytosol	29.88	35.64
PGSC0003DMT400080229	Potato	plastid	18.98	35.33
PGSC0003DMT400016783	Potato	mitochondrion	25.41	33.93
PGSC0003DMT400049974	Potato	plastid	14.94	32.95
PGSC0003DMT400071814	Potato	plasma membrane	15.98	29.73
PGSC0003DMT400047464	Potato	cytosol	14.32	24.86

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102590571	MapMan:18.4.1.8.1	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	UniProt:M1AFI2
PFAM:PF07714	PFAM:PF08263	EnsemblPlantsGene:PGSC0003DMG400008403	PGSC:PGSC0003DMG400008403	EnsemblPlants:PGSC0003DMT400021662	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27003	PANTHER:PTHR27003:SF244	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI000296F65A	RefSeq:XP_006338928.1	SEG:seg	:	:

Description

ATP binding / kinase/ protein serine / threonine kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400008403]

Coordinates

chr10:+:53211328..53217628

Molecular Weight (calculated)

105980.0 Da

IEP (calculated)

6.282

GRAVY (calculated)

-0.190

Length

964 amino acids

Sequence
(BLAST)

001: MAATRLLLCF IIFSSGIDFI YTVTDPRDVT ILRSLKDQWE NTPPSWQKSD DPCGTSWEGV TCNNSRVTAL GLSTMGLRGK LSGDIGGLTE LISLDLSFNR
101: GLTGSLSPRI GDLQKLNILI LAGCSFSGSI PMELGRLAEL SFLALNSNNF TGEIPQTLGN LSKLYWLDLA DNQLTGPIPV STSSSSGLDL LKKAKHFHFN
201: KNQLSGSIPD ILFSADMVLI HVLFDGNQLS GSIPFTLGLV QTLEVLRLDR NALNGSVPSN LNNLTSVVEL NLAHNELSGP LPDLTGMNSL NYLDLSNNSF
301: HKSEAPIWFS TLESLTTLVI EYGSLHGSVP QKLFALPQLQ QVKLRNNALN DTLNMGGISG RQLTLVDLQN NEISSITLGS GYKNTLILIG NPVCDTALGN
401: TNYCQLQQQS AKPYSTSLAN CGSKSCPADQ KVSPQSCDCA YPYQGTFYFR GPSFRELSND NTFHSLEMSL WVKLDLTPGS VSLQNPFFNI DDYLQVQLEL
501: FPPTGKYFNR SEVERIGFSL SNQTYKPPHE FGPYYFIASP YTFQAERGET SISSRQVIGI ATGCTILVLL LVALAIYAIQ QKKLAERAIG LSRPFASWAP
601: SGNDSEGAPQ LKGARWFSYD ELKKCTGNFS ERNEIGSGGY GKVYRGTLAN GQVIAIKRAQ HGSMQGGQEF KTEIELLSRV HHKNLVGLVG FCFEQGEQVL
701: VYEYMPNGSL RENLSGKTSI YLDWKRRLRV ALGSARGLAY LHELANPPII HRDVKSTNIL LDQNLTAKVG DFGLSKLVSD SSKGHVSTQV KGTLGYLDPE
801: YYMTQQLTEK SDVYSFGVVM LELITAKQPI EKGKYVVREM RTAINKNDEE HYGLSNMIDP VIRNMPNLIG FTRFVDVAMQ CVEEAAADRP TMSEVVKMLE
901: SILQNDGLET NSTSASSSIT DFGTAIAASR HPYNKEALQR KEINDTHAFD YSGGYTLPTN VEPK

Best Arabidopsis Sequence Match ( AT1G79620.1 )
(BLAST)

001: MVGSNTVTAT SRLLLICFAY SFTVFSMISS VTDPRDAAAL RSLMDQWDNT PPSWGGSDDP CGTPWEGVSC NNSRITALGL STMGLKGRLS GDIGELAELR
101: SLDLSFNRGL TGSLTSRLGD LQKLNILILA GCGFTGTIPN ELGYLKDLSF LALNSNNFTG KIPASLGNLT KVYWLDLADN QLTGPIPISS GSSPGLDLLL
201: KAKHFHFNKN QLSGTIPPKL FSSEMILIHV LFDGNRFTGS IPSTLGLIQT LEVLRLDRNT LTGKVPENLS NLTNIIELNL AHNKLVGSLP DLSDMKSMNY
301: VDLSNNSFDP SESPLWFSTL PSLTTLVMEY GSLQGPLPNK LFGFPQLQQV RLKKNAFNGT LSLGDTVGPE LQLVDLQDND ISSVTLSSGY TNTLILEGNP
401: VCTTALSNTN YCQIQQQQVK RIYSTSLANC GGKSCPLDQK VSPQSCECAY PYEGTLYFRG PMFRDLSNVN TYHSLEMSLW VKLGLTPGSV SLQNPFFNND
501: DYLQIQLALF PPMGKYFNRT EVQRIGFDLS NQTYKPPPLF GPYYFIASPY TFPADGNGHS LSSRMVTGII TGCSALVLCL VALGIYAMWQ KRRAEQAIGL
601: SRPFVSWASS GKDSGGAPQL KGARWFSYEE LKKITNNFSV SSELGYGGYG KVYKGMLQDG HMVAIKRAQQ GSTQGGLEFK TEIELLSRVH HKNLVGLVGF
701: CFEQGEQILV YEYMSNGSLK DSLTGRSGIT LDWKRRLRVA LGSARGLAYL HELADPPIIH RDVKSTNILL DENLTAKVAD FGLSKLVSDC TKGHVSTQVK
801: GTLGYLDPEY YTTQKLTEKS DVYSFGVVMM ELITAKQPIE KGKYIVREIK LVMNKSDDDF YGLRDKMDRS LRDVGTLPEL GRYMELALKC VDETADERPT
901: MSEVVKEIEI IIQNSGASSS SSASASSSAT DFGEKLLYGG TLKKKEARDG DGGGAFDYSG GYSVPTKIEP K

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:TAIR;Acc:AT1G79620]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.