Factsheet for PGSC0003DMT400047464

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
plasma membrane 1
mitochondrion 3
cytosol 2
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g078470.2.1	Tomato	cytosol	29.01	83.42
VIT_06s0004g06030.t01	Wine grape	cytosol	45.23	57.18
KRH72632	Soybean	mitochondrion	43.96	53.28
KRH16995	Soybean	plastid	43.96	53.28
KRG98306	Soybean	cytosol, plastid	42.7	52.32
GSMUA_Achr1P17280_001	Banana	cytosol	38.02	50.48
KRH30349	Soybean	cytosol, mitochondrion, nucleus, plastid	41.08	50.44
PGSC0003DMT400049974	Potato	plastid	36.58	46.45
Bra002607.1-P	Field mustard	plastid	39.1	45.97
AT5G58940.1	Thale cress	cytosol, nucleus, plastid	38.92	45.96
HORVU3Hr1G085360.4	Barley	plastid	35.32	45.06
KXG33712	Sorghum	plastid	36.94	44.76
TraesCS3D01G359400.1	Wheat	mitochondrion	35.32	44.65
TraesCS3A01G366500.1	Wheat	mitochondrion, plastid	35.5	44.57
TraesCS3B01G398100.1	Wheat	mitochondrion	35.5	44.37
CDY54184	Canola	plasma membrane, vacuole	33.51	41.89
TraesCS5D01G501800.1	Wheat	plastid	34.23	41.21
Os03t0825800-01	Rice	plasma membrane	31.53	39.5
TraesCS5B01G501300.2	Wheat	plastid	33.87	38.37
EER90604	Sorghum	plastid	29.55	37.61
Zm00001d012929_P002	Maize	plastid	28.29	35.93
PGSC0003DMT400071814	Potato	plasma membrane	31.35	33.59
CDX80322	Canola	mitochondrion	38.92	23.92
PGSC0003DMT400016783	Potato	mitochondrion	25.05	19.25
PGSC0003DMT400080229	Potato	plastid	16.04	17.18
PGSC0003DMT400047024	Potato	plasma membrane	25.05	16.39
PGSC0003DMT400071263	Potato	cytosol	23.78	16.34
PGSC0003DMT400021662	Potato	plasma membrane	24.86	14.32
PGSC0003DMT400047023	Potato	plasma membrane	24.14	14.15

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102583647	MapMan:18.4.1.34	Gene3D:3.30.200.20	Gene3D:3.60.10.10	InterPro:Endo/exonu/phosph_ase_sf
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004683
GO:GO:0005488	GO:GO:0005515	GO:GO:0005516	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009409	GO:GO:0009628	GO:GO:0009651
GO:GO:0009719	GO:GO:0009737	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0042542	InterPro:IPR000719	InterPro:IPR036691	InterPro:Kinase-like_dom_sf	UniProt:M1BKT5	PFAM:PF00069
EnsemblPlantsGene:PGSC0003DMG402018444	PGSC:PGSC0003DMG402018444	EnsemblPlants:PGSC0003DMT400047464	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27003	PANTHER:PTHR27003:SF63	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000296B236	SEG:seg	:	:	:

Description

Calcium/calmodulin-regulated receptor-like kinase [Source:PGSC_GENE;Acc:PGSC0003DMG402018444]

Coordinates

chr3:+:32243518..32247774

Molecular Weight (calculated)

63066.0 Da

IEP (calculated)

8.096

GRAVY (calculated)

-0.489

Length

555 amino acids

Sequence
(BLAST)

001: MKGTNRSQRQ SFQQHLIIDY SAGPRKHHHK FGFSFKSVTK KLSDVFSTLV FWQKKANSET NRSQSPEREV SSSKGSNSSG SKRGILLKPQ YSNSHRTSMA
101: TREQLGTFEF SFEEICQATG NFSAVHKIGE GGFGTVYKGK LKNGFPVAIK RAKKDLRVLA EFKNEVQALS KIEHLNLVRF YGFLELRDER IIITEYVSNG
201: TLREHLDGKN GTELEVAERL SIAIDVAHAI TYLHSYTDPP IIHRDIKASN ILITENLHAK VADFGFARLA AEDPCATHIS TQIKGTAGYL DPEYLRTYQL
301: TEKSDVYSFG VLLVEMMTGR HPIETNRTID ERVTIKWAMR ILKHGDSVIA MDPRLRRSPA SIEAVEKVLK LARQCLAPSR LARPAMKKCA EPWTTWLRMT
401: DTFMERRDII YISSFSDDEV VRGEEKNDDN LETIKSKSQV QNNINLSPRY SQNTGRVYGS IEHETITDKD SQIDNIQSVN IKIHTQNDPP FLLTVVYAKC
501: TEALRMELWD DIRSLANNCL DPWGVIGDFN VIMGSEEKLG GRDHIFEESL EYLDC

Best Arabidopsis Sequence Match ( AT5G58940.2 )
(BLAST)

001: MPMRSKTPTP LRFSNGKHQR DDSEYSWTDV GTGEKARNVS VLGAIRRAAK KVFVIIFLGQ RKLKPTECRS DPGESSTHDR ESTLSGWTGY SSPSSFGRST
101: ERKVSGQYRF SGSRFQSPGK DSSSSKSWHQ GPVIFSFGEL QRATANFSSV HQIGEGGFGT VFKGKLDDGT IVAIKRARKN NYGKSWLLEF KNEIYTLSKI
201: EHMNLVKLYG FLEHGDEKVI VVEYVANGNL REHLDGLRGN RLEMAERLEI AIDVAHALTY LHTYTDSPII HRDIKASNIL ITNKLRAKVA DFGFARLVSE
301: DLGATHISTQ VKGSAGYVDP DYLRTFQLTD KSDVYSFGVL LVEILTGRRP IELKRPRKDR LTVKWALRRL KDDEAVLIMD PFLKRNRAAI EVAEKMLRLA
401: SECVTPTRAT RPAMKGIAEK LWAIRREMKE TMICSSASNS SCSSTTHSFI GRDSDRYALP RIEDNENSIE

Arabidopsis Description

CRCK1Calmodulin-binding receptor-like cytoplasmic kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIL7]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.