Factsheet for PGSC0003DMT400047024

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 9
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g102700.2.1	Tomato	plasma membrane	84.32	69.96
PGSC0003DMT400047023	Potato	plasma membrane	60.85	54.49
KRH11702	Soybean	plasma membrane	57.78	51.2
KRH36702	Soybean	plasma membrane	57.55	51.15
KRH51256	Soybean	plasma membrane	58.25	50.05
KRH51255	Soybean	plasma membrane	53.18	48.49
KRH36704	Soybean	plastid	49.88	47.21
PGSC0003DMT400021662	Potato	plasma membrane	52.48	46.16
Zm00001d004558_P001	Maize	cytosol, extracellular, plastid	5.54	41.59
PGSC0003DMT400071263	Potato	cytosol	30.42	31.93
PGSC0003DMT400049974	Potato	plastid	16.39	31.81
PGSC0003DMT400080229	Potato	plastid	17.92	29.34
PGSC0003DMT400016783	Potato	mitochondrion	24.88	29.22
VIT_12s0035g02090.t01	Wine grape	plasma membrane	62.62	28.98
PGSC0003DMT400071814	Potato	plasma membrane	16.98	27.8
PGSC0003DMT400047464	Potato	cytosol	16.39	25.05

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.8.1	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	UniProt:M1BK19	PFAM:PF07714	EnsemblPlantsGene:PGSC0003DMG400018264
PGSC:PGSC0003DMG400018264	EnsemblPlants:PGSC0003DMT400047024	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27003
PANTHER:PTHR27003:SF134	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF52058	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002958009	SEG:seg

Description

Leucine-rich repeat family protein / protein kinase family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400018264]

Coordinates

chr1:+:79369820..79379359

Molecular Weight (calculated)

93355.8 Da

IEP (calculated)

6.752

GRAVY (calculated)

-0.135

Length

848 amino acids

Sequence
(BLAST)

001: MVVSMAMMLR IFVSFLVVLI QVLSVAARTN PVDSAALKSL KDSWYGPSNW TGEDPCGSSW EGVGCRNSRV ISITLSSMDL NGQLSGDVQG LSELETLDLS
101: YNKDLTGYLS QSIGKLTKLS NLILVGCGFS GPIPDSIGSL TQLFFLSLNS NKFTGGIPAT IGYLTELYWL DLSDNQIEGN IPVSSGSNPG LDMLVNTKHF
201: HFGKNQLSGE IPARLFHSKM TLIHLLVENN RFTGVIPDTL GFVQTMEVLN SFSGSVPQNL NNLTHVNELD ISNNNLNGLL PNLTGMNVLN YLLAGNPICN
301: ERGEGRKTYC METQQTETYS TPPENCLPTE CSSNQVSSPT CKCAFPYTGN LVFRAPSFSN LGNRTTYETL QKSLLLFFQK RQLPVESVSL RNPIRDLNDH
401: LVIQLQVFPS SQDRFTWTGV SGIASVLSNQ TFKTPSSFGP FFFIGETYKY FVGESTGSKK SVSTGIIIGA TVGGSVLAIL ALIIGIYAFR QKKRAEDAAK
501: RSDPFASWDS NKHSGAVPQL TGARFFSFDE LKKWTNNFSE TNVIGCGGYG KVYRGSLLNR ELVAIKRALQ GSMQGTHEFK TEIELLSRVH HKNVVGLAGF
601: CFDQAEQMLV YEYIPNGTLK DGLSGKTGVR LDWMRRLKIA IGAARGLQYL HDHVNPPIVH RDIKSNNILL ADHLNAKVAD FGLSKLLGER GHITTQVKGT
701: MGYMDPEYYM TNQLTEKSDV FSFGVVLLEI VTGKVPIDKG RYIVKEVKDA MDMTKDLYNL HEILDPAVCS GATPRSLEKF VDLALKCVEE KGVNRPKMSE
801: VVKQIEYIME IEGLNPDDES ASTSATYEGA NKGLNHPYTE SLFVYSEA

Best Arabidopsis Sequence Match ( AT5G49760.1 )
(BLAST)

001: MSSRTGASLL LILFFFQICS VSALTNGLDA SALNALKSEW TTPPDGWEGS DPCGTNWVGI TCQNDRVVSI SLGNLDLEGK LPADISFLSE LRILDLSYNP
101: KLSGPLPPNI GNLGKLRNLI LVGCSFSGQI PESIGTLKEL IYLSLNLNKF SGTIPPSIGL LSKLYWFDIA DNQIEGELPV SNGTSAPGLD MLLQTKHFHF
201: GKNKLSGNIP KELFSSNMSL IHVLFDGNQF TGEIPETLSL VKTLTVLRLD RNKLIGDIPS YLNNLTNLNE LYLANNRFTG TLPNLTSLTS LYTLDVSNNT
301: LDFSPIPSWI SSLPSLSTLR MEGIQLNGPI PISFFSPPQL QTVILKRNSI VESLDFGTDV SSQLEFVDLQ YNEITDYKPS ANKVLQVILA NNPVCLEAGN
401: GPSYCSAIQH NTSFSTLPTN CSPCEPGMEA SPTCRCAYPF MGTLYFRSPS FSGLFNSTNF SILQKAIADF FKKFNYPVDS VGVRNIRENP TDHQLLIDLL
501: VFPLGRESFN QTGMSLVGFA FSNQTYKPPP IFGPYIFKAD LYKQFSDVEV SSKSSNKSIL IGAVVGVVVL LLLLTIAGIY ALRQKKRAER ATGQNNPFAK
601: WDTSKSSIDA PQLMGAKAFT FEELKKCTDN FSEANDVGGG GYGKVYRGIL PNGQLIAIKR AQQGSLQGGL EFKTEIELLS RVHHKNVVRL LGFCFDRNEQ
701: MLVYEYISNG SLKDSLSGKS GIRLDWTRRL KIALGSGKGL AYLHELADPP IIHRDIKSNN ILLDENLTAK VADFGLSKLV GDPEKTHVTT QVKGTMGYLD
801: PEYYMTNQLT EKSDVYGFGV VLLELLTGRS PIERGKYVVR EVKTKMNKSR SLYDLQELLD TTIIASSGNL KGFEKYVDLA LRCVEEEGVN RPSMGEVVKE
901: IENIMQLAGL NPNSDSATSS RTYEDAIKGS GDPYGSESFQ YSGNFPASKL EPQ

Arabidopsis Description

At5g49760 [Source:UniProtKB/TrEMBL;Acc:Q8GZ99]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.