Factsheet for PGSC0003DMT400049974

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g012170.2.1	Tomato	plastid	97.25	97.25
Bra037331.1-P	Field mustard	plastid	57.44	62.13
CDY07228	Canola	plastid	57.44	61.67
AT4G00330.2	Thale cress	plastid	56.29	59.85
TraesCS4D01G312400.1	Wheat	plastid	56.75	57.94
CDY68957	Canola	cytosol, plasma membrane	56.29	57.88
HORVU4Hr1G080110.9	Barley	plastid	56.52	57.85
TraesCS4B01G315400.1	Wheat	plastid	56.06	57.24
TraesCS4A01G414700.1	Wheat	plastid	56.75	57.01
GSMUA_Achr5P10620_001	Banana	plastid	54.46	55.22
EER95499	Sorghum	plastid	52.86	54.23
Os03t0148700-01	Rice	plasma membrane	53.09	53.95
Zm00001d027676_P001	Maize	cytosol, plastid	43.94	53.33
GSMUA_Achr1P03260_001	Banana	plastid	54.69	50.96
HORVU6Hr1G091790.4	Barley	peroxisome, plastid	50.11	47.82
TraesCS6D01G383700.1	Wheat	plastid	49.89	46.98
TraesCS6A01G399500.1	Wheat	peroxisome, plastid	49.89	46.68
EES07775	Sorghum	plastid	49.2	46.24
Os02t0821400-01	Rice	cytosol, mitochondrion, nucleus, plastid	47.83	44.28
Zm00001d051887_P001	Maize	plastid	49.43	42.94
TraesCS6B01G439700.1	Wheat	plastid	49.66	42.63
PGSC0003DMT400047464	Potato	cytosol	46.45	36.58
PGSC0003DMT400071814	Potato	plasma membrane	42.79	36.1
KRH06617	Soybean	cytosol	60.18	29.0
VIT_15s0046g01830.t01	Wine grape	mitochondrion, plastid	70.48	27.6
KRH48103	Soybean	cytosol	60.41	25.41
PGSC0003DMT400016783	Potato	mitochondrion	29.29	17.73
PGSC0003DMT400080229	Potato	plastid	19.91	16.8
PGSC0003DMT400071263	Potato	cytosol	30.43	16.46
PGSC0003DMT400047024	Potato	plasma membrane	31.81	16.39
PGSC0003DMT400047023	Potato	plasma membrane	35.01	16.16
PGSC0003DMT400021662	Potato	plasma membrane	32.95	14.94

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102603218	MapMan:18.4.1.34	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1BPM7	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG402019416
PGSC:PGSC0003DMG402019416	EnsemblPlants:PGSC0003DMT400049974	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27003
PANTHER:PTHR27003:SF117	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI000295CD3B	RefSeq:XP_006358670.1	SEG:seg	:	:	:

Description

ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG402019416]

Coordinates

chr10:-:6586178..6592924

Molecular Weight (calculated)

47958.7 Da

IEP (calculated)

9.850

GRAVY (calculated)

-0.459

Length

437 amino acids

Sequence
(BLAST)

001: MKSPNTQFSG GGRRSSSGAV SMSSSSVGSR TSDRLPHSPS SSNYSSTTTA ISQKSNSGRN PVIFAVKSIA EAFASCFTPP EPKSSSTNFG DSDSFKAPSV
101: ASDGGRKKRH SSSSSRGRSI YGSENNSIHT KEAGSIKFNM EDIYKATKNF SPSLKIGQGG FGIVYKGCLP DGTVVAIKRA KNNIHDKHSG AEFRSEVRTL
201: EKIEHLNLVK FYGFLEHGEE KILVVEYVPN GTLREHLDSV SGNVLDFASR LDIGIDVGHA ITYLHMYTDH PIIHRDIKSS NILLTENLRA KVADFGFARL
301: AADTESGATH VSTQVKGTAG YLDPEYLSTY QLTEKSDVYS FGVLLVELVT GRRPIESKKE IKERITARWA MKKFTSGDAI LTLDPRLERS AANSLAMEKI
401: YELALQCLAP HRQNRPTMRK CAEILWSIRK NYRELAG

Best Arabidopsis Sequence Match ( AT4G00330.1 )
(BLAST)

001: MPSRRRHSYT VGSPATTSSN YSNTTFTDRS FPTTPARTST DTTTSIARRI SGIFINCFTP PDSVSSNYID NSKSSSDNNI RSRRSSTGSS SVQRSYGNAN
101: ETEHTRFTFD EIYDATKNFS PSFRIGQGGF GTVYKVKLRD GKTFAVKRAK KSMHDDRQGA DAEFMSEIQT LAQVTHLSLV KYYGFVVHND EKILVVEYVA
201: NGTLRDHLDC KEGKTLDMAT RLDIATDVAH AITYLHMYTQ PPIIHRDIKS SNILLTENYR AKVADFGFAR LAPDTDSGAT HVSTQVKGTA GYLDPEYLTT
301: YQLTEKSDVY SFGVLLVELL TGRRPIELSR GQKERITIRW AIKKFTSGDT ISVLDPKLEQ NSANNLALEK VLEMAFQCLA PHRRSRPSMK KCSEILWGIR
401: KDYRELLNTS L

Arabidopsis Description

CRCK2Calmodulin-binding receptor-like cytoplasmic kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZJ9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.