Factsheet for Solyc10g012170.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400049974	Potato	plastid	97.25	97.25
Bra037331.1-P	Field mustard	plastid	56.75	61.39
CDY07228	Canola	plastid	56.75	60.93
AT4G00330.2	Thale cress	plastid	55.84	59.37
TraesCS4D01G312400.1	Wheat	plastid	56.52	57.71
HORVU4Hr1G080110.9	Barley	plastid	56.29	57.61
CDY68957	Canola	cytosol, plasma membrane	55.84	57.41
TraesCS4B01G315400.1	Wheat	plastid	55.84	57.01
TraesCS4A01G414700.1	Wheat	plastid	56.52	56.78
GSMUA_Achr5P10620_001	Banana	plastid	55.38	56.15
EER95499	Sorghum	plastid	52.63	53.99
Os03t0148700-01	Rice	plasma membrane	52.86	53.72
Zm00001d027676_P001	Maize	cytosol, plastid	43.71	53.06
GSMUA_Achr1P03260_001	Banana	plastid	54.92	51.17
HORVU6Hr1G091790.4	Barley	peroxisome, plastid	49.89	47.6
TraesCS6D01G383700.1	Wheat	plastid	49.66	46.77
TraesCS6A01G399500.1	Wheat	peroxisome, plastid	49.66	46.47
EES07775	Sorghum	plastid	48.74	45.81
Os02t0821400-01	Rice	cytosol, mitochondrion, nucleus, plastid	47.6	44.07
Zm00001d051887_P001	Maize	plastid	48.97	42.54
TraesCS6B01G439700.1	Wheat	plastid	49.43	42.44
Solyc10g054310.1.1	Tomato	cytosol	7.09	40.26
Solyc03g078470.2.1	Tomato	cytosol	16.48	37.31
Solyc07g007780.2.1	Tomato	nucleus	43.02	36.29
Solyc10g054300.1.1	Tomato	cytosol, nucleus, plastid	13.5	35.76
KRH06617	Soybean	cytosol	60.18	29.0
VIT_15s0046g01830.t01	Wine grape	mitochondrion, plastid	70.94	27.78
KRH48103	Soybean	cytosol	60.41	25.41
Solyc01g102710.2.1	Tomato	plasma membrane	33.18	15.25
Solyc01g102680.2.1	Tomato	plasma membrane	32.72	14.9
Solyc10g074890.1.1	Tomato	cytosol, nucleus, plasma membrane	30.66	14.81
Solyc10g085670.1.1	Tomato	extracellular	32.49	14.73
Solyc09g055180.2.1	Tomato	cytosol, nucleus, plasma membrane	30.21	14.57
Solyc10g074900.1.1	Tomato	cytosol, plasma membrane, plastid	29.75	14.32
Solyc01g102700.2.1	Tomato	plasma membrane	32.49	13.89
Solyc09g055570.2.1	Tomato	plasma membrane	28.6	13.44

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.34	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	UniProt:K4CYJ4	InterPro:Kinase-like_dom_sf	PFAM:PF07714	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27003	PANTHER:PTHR27003:SF117	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc10g012170.2	EnsemblPlants:Solyc10g012170.2.1	UniParc:UPI000276C199
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr10:-:4518212..4524148

Molecular Weight (calculated)

48003.8 Da

IEP (calculated)

9.843

GRAVY (calculated)

-0.466

Length

437 amino acids

Sequence
(BLAST)

001: MKSPNTQFSG GGRRSSSGAV SMSSSSVGSR TSDRLPHSPS TSTYSSTTTT ISQKSNSGRN PVIIAVKSVV EAFASCFTPP EPKSSSTNFG DSDSFKAPSV
101: ASDGGRKKRH SSSSSRGRSI YGSENNSTHT KEAGSIKFNM EDIYKATKNF SPSLKIGQGG FGIVYKGCLT DGTVVAIKRA KKNIHDKHSG AEFRSEVRTL
201: EKIEHLNLVK FYGFLEHGEE KILVVEYVSN GTLREHLDSV DGNVLDFASR LDIGIDVGHA ITYLHMYTDH PIIHRDIKSS NILLTENLRA KVADFGFARL
301: AADTESGATH VSTQVKGTAG YLDPEYLSTY QLTEKSDVYS FGVLLVELVT GRRPIEPKKE IKERITARWA MKKFTSGDAI LTLDPRLERS AANSLAMEKI
401: YELALQCLAP HRQNRPTMRK CAEILWSIRK NYRELAG

Best Arabidopsis Sequence Match ( AT4G00330.1 )
(BLAST)

001: MPSRRRHSYT VGSPATTSSN YSNTTFTDRS FPTTPARTST DTTTSIARRI SGIFINCFTP PDSVSSNYID NSKSSSDNNI RSRRSSTGSS SVQRSYGNAN
101: ETEHTRFTFD EIYDATKNFS PSFRIGQGGF GTVYKVKLRD GKTFAVKRAK KSMHDDRQGA DAEFMSEIQT LAQVTHLSLV KYYGFVVHND EKILVVEYVA
201: NGTLRDHLDC KEGKTLDMAT RLDIATDVAH AITYLHMYTQ PPIIHRDIKS SNILLTENYR AKVADFGFAR LAPDTDSGAT HVSTQVKGTA GYLDPEYLTT
301: YQLTEKSDVY SFGVLLVELL TGRRPIELSR GQKERITIRW AIKKFTSGDT ISVLDPKLEQ NSANNLALEK VLEMAFQCLA PHRRSRPSMK KCSEILWGIR
401: KDYRELLNTS L

Arabidopsis Description

CRCK2Calmodulin-binding receptor-like cytoplasmic kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZJ9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.