Factsheet for Zm00001d027676_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
mitochondrion 1
cytosol 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95499	Sorghum	plastid	94.17	79.58
Os03t0148700-01	Rice	plasma membrane	80.0	66.98
TraesCS4D01G312400.1	Wheat	plastid	76.11	64.02
TraesCS4A01G414700.1	Wheat	plastid	76.11	62.99
TraesCS4B01G315400.1	Wheat	plastid	74.72	62.85
HORVU4Hr1G080110.9	Barley	plastid	74.44	62.76
PGSC0003DMT400049974	Potato	plastid	53.33	43.94
Solyc10g012170.2.1	Tomato	plastid	53.06	43.71
Bra037331.1-P	Field mustard	plastid	48.61	43.32
CDY07228	Canola	plastid	48.89	43.24
AT4G00330.2	Thale cress	plastid	46.67	40.88
CDY68957	Canola	cytosol, plasma membrane	47.22	40.0
Zm00001d003110_P002	Maize	cytosol, plastid	37.78	38.42
Zm00001d025799_P004	Maize	endoplasmic reticulum, plasma membrane	38.33	36.03
Zm00001d051887_P001	Maize	plastid	46.94	33.6
Zm00001d012929_P002	Maize	plastid	36.94	30.43
Zm00001d030173_P007	Maize	plasma membrane	41.94	26.68
Zm00001d020118_P001	Maize	plasma membrane, plastid	28.06	24.28
KRH06617	Soybean	cytosol	51.39	20.4
VIT_15s0046g01830.t01	Wine grape	mitochondrion, plastid	55.56	17.92
KRH48103	Soybean	cytosol	51.67	17.9
Zm00001d038522_P002	Maize	plasma membrane	37.78	13.96
Zm00001d038503_P007	Maize	plasma membrane	35.0	13.36
Zm00001d038494_P015	Maize	plasma membrane	34.72	13.26
Zm00001d010448_P003	Maize	plasma membrane	34.72	13.06
Zm00001d041773_P002	Maize	extracellular	33.89	12.42
Zm00001d043075_P002	Maize	plasma membrane	33.06	11.97
Zm00001d029012_P002	Maize	plastid	34.44	11.75
Zm00001d004559_P021	Maize	plasma membrane	31.67	10.26
Zm00001d043091_P002	Maize	plasma membrane	35.83	8.55
Zm00001d004558_P001	Maize	cytosol, extracellular, plastid	0.83	2.65

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.34	Gene3D:3.30.200.20	UniProt:A0A1D6JNR9	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	ProteinID:ONL93672.1	PFAM:PF00069
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27003	PANTHER:PTHR27003:SF117	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0008446A50	EnsemblPlantsGene:Zm00001d027676
EnsemblPlants:Zm00001d027676_P001	EnsemblPlants:Zm00001d027676_T001	SEG:seg	:	:	:

Description

Calmodulin-binding receptor-like cytoplasmic kinase 1

Coordinates

chr1:+:10854296..10857324

Molecular Weight (calculated)

39526.9 Da

IEP (calculated)

9.528

GRAVY (calculated)

-0.403

Length

360 amino acids

Sequence
(BLAST)

001: MMKSVSGTGS AGSRSDPGGS GELSRFSVAT TASSASQPSA NGGARGISFL DAFRSCFVPP EARSPENSMS DESHPSHQLS QSLSSQGSNS GSVFGSKRSI
101: KGMYSPMHKS SLDREIPGST KFSLPQIQKA TKNFSPNFKI GQGGSGTVYK GQLADGTLVA VKRAKKNVYD KHMGREFWNE IETLQRIEHL NLVRFHGYLE
201: FGGEQLIIVE YVPNGNLREH LDCINGKILE FSLRLEIAID VAHAITYLHT YSDHPVIHRD IKSSNILLMN NCRAKVADFG FAKLAPTDSS HISTQVKGTA
301: GYLDPEYLRT YQLNEKSDVY SFGVLLVELV TGRRPIEPKK AIIERVTTKW VSLCHSRHNT

Best Arabidopsis Sequence Match ( AT4G00330.1 )
(BLAST)

001: MPSRRRHSYT VGSPATTSSN YSNTTFTDRS FPTTPARTST DTTTSIARRI SGIFINCFTP PDSVSSNYID NSKSSSDNNI RSRRSSTGSS SVQRSYGNAN
101: ETEHTRFTFD EIYDATKNFS PSFRIGQGGF GTVYKVKLRD GKTFAVKRAK KSMHDDRQGA DAEFMSEIQT LAQVTHLSLV KYYGFVVHND EKILVVEYVA
201: NGTLRDHLDC KEGKTLDMAT RLDIATDVAH AITYLHMYTQ PPIIHRDIKS SNILLTENYR AKVADFGFAR LAPDTDSGAT HVSTQVKGTA GYLDPEYLTT
301: YQLTEKSDVY SFGVLLVELL TGRRPIELSR GQKERITIRW AIKKFTSGDT ISVLDPKLEQ NSANNLALEK VLEMAFQCLA PHRRSRPSMK KCSEILWGIR
401: KDYRELLNTS L

Arabidopsis Description

CRCK2Calmodulin-binding receptor-like cytoplasmic kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZJ9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.