CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027676_P001	Maize	cytosol, plastid	79.58	94.17
Os03t0148700-01	Rice	plasma membrane	81.92	81.16
TraesCS4D01G312400.1	Wheat	plastid	78.17	77.8
TraesCS4B01G315400.1	Wheat	plastid	77.23	76.87
TraesCS4A01G414700.1	Wheat	plastid	78.17	76.55
HORVU4Hr1G080110.9	Barley	plastid	76.29	76.11
Bra037331.1-P	Field mustard	plastid	50.7	53.47
CDY07228	Canola	plastid	50.94	53.32
PGSC0003DMT400049974	Potato	plastid	54.23	52.86
Solyc10g012170.2.1	Tomato	plastid	53.99	52.63
AT4G00330.2	Thale cress	plastid	49.06	50.85
CDY68957	Canola	cytosol, plasma membrane	49.53	49.65
EES07775	Sorghum	plastid	45.54	41.72
KXG33712	Sorghum	plastid	44.13	41.05
EER90604	Sorghum	plastid	38.73	37.84
OQU81903	Sorghum	extracellular, plastid	37.56	37.21
EER91847	Sorghum	plasma membrane	42.72	34.08
KRH06617	Soybean	cytosol	52.58	24.7
VIT_15s0046g01830.t01	Wine grape	mitochondrion, plastid	57.75	22.04
KRH48103	Soybean	cytosol	53.29	21.85
KXG25749	Sorghum	plastid	32.16	18.77
KXG33608	Sorghum	plasma membrane	33.8	15.09
KXG22231	Sorghum	plasma membrane	34.51	15.08
OQU87749	Sorghum	plasma membrane	33.1	15.06
OQU77613	Sorghum	plasma membrane	33.1	14.97
EES18391	Sorghum	plasma membrane	33.1	14.95
KXG23247	Sorghum	plasma membrane	33.33	14.67
EES03800	Sorghum	plasma membrane	32.16	14.47
KXG39452	Sorghum	plasma membrane	32.16	13.95

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.34	Gene3D:3.30.200.20	EntrezGene:8085478	UniProt:C5WXX3	EnsemblPlants:EER95499
ProteinID:EER95499	ProteinID:EER95499.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27003
PANTHER:PTHR27003:SF117	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	EnsemblPlantsGene:SORBI_3001G503300	SUPFAM:SSF56112
unigene:Sbi.8397	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A83065	RefSeq:XP_002468501.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:-:77187586..77191454

Molecular Weight (calculated)

47102.0 Da

IEP (calculated)

9.329

GRAVY (calculated)

-0.390

Length

426 amino acids

Sequence
(BLAST)

001: MMRSVSGTGS AGSRRSDPGG SGELSRFSVA TTTASSASDS SASSGARGIS FLDAFRSCFV PPEARSPENS MSDDSHPSHQ LSQSLSSQGS NSGSVFGSRR
101: SIKGMYSPMH KSSLDREIPG STKFSLSQIQ KATKNFSPNF KIGQGGSGTV YKGQLADGTL VAVKRAKKNV YDKHMGREFW NEIETLQRIE HLNLVRFHGY
201: LEFGGEQLII VEYVPNGNLR EHLDCINGKI LEFSMRLEIA IDVAHAITYL HTYSDQPVIH RDIKSSNILL MNNCRAKVAD FGFAKLAPTD ASHISTQVKG
301: TAGYLDPEYL RTYQLNEKSD VYSFGVLLVE LVTGRRPIEP KRSIIERVTT KWAMEKFVEG NAIQTLDPNL EATDAINLAV EKLYELALQC LSPTKRNRPS
401: MKRSVEILWS IRKDYRELVV PTSAMN

Best Arabidopsis Sequence Match ( AT4G00330.1 )
(BLAST)

001: MPSRRRHSYT VGSPATTSSN YSNTTFTDRS FPTTPARTST DTTTSIARRI SGIFINCFTP PDSVSSNYID NSKSSSDNNI RSRRSSTGSS SVQRSYGNAN
101: ETEHTRFTFD EIYDATKNFS PSFRIGQGGF GTVYKVKLRD GKTFAVKRAK KSMHDDRQGA DAEFMSEIQT LAQVTHLSLV KYYGFVVHND EKILVVEYVA
201: NGTLRDHLDC KEGKTLDMAT RLDIATDVAH AITYLHMYTQ PPIIHRDIKS SNILLTENYR AKVADFGFAR LAPDTDSGAT HVSTQVKGTA GYLDPEYLTT
301: YQLTEKSDVY SFGVLLVELL TGRRPIELSR GQKERITIRW AIKKFTSGDT ISVLDPKLEQ NSANNLALEK VLEMAFQCLA PHRRSRPSMK KCSEILWGIR
401: KDYRELLNTS L

Arabidopsis Description

CRCK2Calmodulin-binding receptor-like cytoplasmic kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZJ9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.