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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • mitochondrion 2
  • plasma membrane 1
  • plastid 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os01t0960400-01 Rice plasma membrane 81.37 62.4
TraesCS3B01G602700.1 Wheat plasma membrane 77.81 60.11
TraesCS3D01G542300.1 Wheat plasma membrane 77.81 59.85
TraesCS7B01G030400.1 Wheat plasma membrane 76.71 58.89
HORVU7Hr1G027310.14 Barley plasma membrane 76.85 58.8
TraesCS7D01G129500.1 Wheat plasma membrane 76.44 58.61
Zm00001d004559_P021 Maize plasma membrane 88.63 58.24
TraesCS7A01G130100.2 Wheat plasma membrane 69.86 55.86
HORVU3Hr1G117890.7 Barley plasma membrane 77.53 55.76
GSMUA_Achr6P32410_001 Banana plasma membrane 66.71 51.64
VIT_06s0004g08250.t01 Wine grape plasma membrane 61.51 46.82
EES18391 Sorghum plasma membrane 59.73 46.24
AT1G06840.1 Thale cress plasma membrane, vacuole 59.59 45.65
Bra015533.1-P Field mustard plasma membrane 58.9 45.31
CDY54882 Canola plasma membrane 58.9 45.31
CDY10230 Canola plasma membrane 58.63 44.91
EES03800 Sorghum plasma membrane 58.08 44.77
Solyc09g055570.2.1 Tomato plasma membrane 56.58 44.41
EER95499 Sorghum plastid 18.77 32.16
OQU81903 Sorghum extracellular, plastid 18.08 30.7
VIT_19s0014g05320.t01 Wine grape cytosol 9.32 29.96
EES07775 Sorghum plastid 18.77 29.46
KXG33712 Sorghum plastid 18.08 28.82
OQU87749 Sorghum plasma membrane 35.62 27.78
KXG33608 Sorghum plasma membrane 35.89 27.46
KXG22231 Sorghum plasma membrane 34.38 25.74
KXG23247 Sorghum plasma membrane 33.84 25.52
OQU77613 Sorghum plasma membrane 32.88 25.48
KXG39452 Sorghum plasma membrane 34.25 25.46
EER90604 Sorghum plastid 14.79 24.77
EER91847 Sorghum plasma membrane 17.95 24.53
TraesCS3A01G536900.1 Wheat extracellular 9.45 21.84
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.8.1Gene3D:3.30.200.20Gene3D:3.80.10.10UniProt:A0A1B6PJA2GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005515
GO:GO:0005524GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006464GO:GO:0006468
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301
GO:GO:0016310GO:GO:0016740GO:GO:0019538InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675
EnsemblPlants:KXG25749ProteinID:KXG25749ProteinID:KXG25749.1InterPro:Kinase-like_dom_sfInterPro:LRR_dom_sfInterPro:Leu-rich_rpt
PFAM:PF00069PFAM:PF13855ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27003
PANTHER:PTHR27003:SF36InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220EnsemblPlantsGene:SORBI_3006G000600SUPFAM:SSF52058
SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASTMHMM:TMhelixUniParc:UPI00081ACE40SEG:seg:
Description
hypothetical protein
Coordinates
chr6:-:34810..44508
Molecular Weight (calculated)
79927.3 Da
IEP (calculated)
6.070
GRAVY (calculated)
-0.132
Length
730 amino acids
Sequence
(BLAST)
001: MICRQLDNNN FSGSTIPSSY GNISTLLKLS LRNCSLEGPV PDVSGIPQLG YLDLSWNQLR GPIPASQFAS NITTIDLSHN YLNGSIPGIF SGLPNLQRLS
101: LDDNNLTGSV PSNIWQNIDL SGNRSLTLDF QNNSLNNLST PLSPPANVTI LLHGNPVCAA QNQLNISQYC QSANVVVPEP GGSADNSTLC QPCDLPFERI
201: PLSPIPCICA IPVYVDYRLK SPGFWNFIPY ESQFQQYLSS GLSLSLYQLE VSTFMWEEGP RLRMDLKLFP NNTPYFNANE VLRLNGMFTG WQIPDSDIFG
301: PYELLSFNRG WYNTILPQGG KSGLSTGAIV GVVMAAFAAA AILSSLVTII ILRRRSRNSS SKKRSAKRIS MKIAGVKDFT FDELSHCTHD FNDSTLIGQG
401: GYGKVYRGVL ADGTVVAIKR AQQGSLQGSK EFFTEIELLS RLHHRNLVSL LGYCDEEDEQ MLVYEYMPNG NLRDHLSARA KAPLDFPMRL RIALGSSRGI
501: LYLHTEADPP IYHRDIKASN ILLDSKFVAK VADFGLSRLA PLPETEGSAP GHVSTVVKGT PGYLDPEYFL THKLTDKSDV YSLGVVFLEL LTGMQPISHG
601: RNIVREVLAA NQSGMIFSVV DNRMGSYPAE CVEKFSALAL RCCQDETDSR PSMVEVVREL EMIWRMTPGT ENIASSESGV LGMGSSSSNT TSTPTASGSR
701: MASSDDHYIS SMEVSGSNLL SSVMPSINPR
Best Arabidopsis Sequence Match ( AT1G06840.1 )
(BLAST)
001: MFSTHHVSRL LIPLLFFFLF CCFSSTFAQD DITNPVEVRA LRVIKESLND PVHRLRNWKH GDPCNSNWTG VVCFNSTLDD GYLHVSELQL FSMNLSGNLS
101: PELGRLSRLT ILSFMWNKIT GSIPKEIGNI KSLELLLLNG NLLNGNLPEE LGFLPNLDRI QIDENRISGP LPKSFANLNK TKHFHMNNNS ISGQIPPELG
201: SLPSIVHILL DNNNLSGYLP PELSNMPRLL ILQLDNNHFD GTTIPQSYGN MSKLLKMSLR NCSLQGPVPD LSSIPNLGYL DLSQNQLNGS IPAGKLSDSI
301: TTIDLSNNSL TGTIPTNFSG LPRLQKLSLA NNALSGSIPS RIWQERELNS TESIIVDLRN NGFSNISGRS DLRPNVTVWL QGNPLCSDGN LLRLCGPITE
401: EDINQGSTNS NTTICSDCPP PYEFSPEPLR RCFCAAPLLV GYRLKSPGFS DFVPYRSEFE QYITSGLSLN LYQLRLDSFQ WQKGPRLRMY LKFFPVFGSN
501: ANNSFIFNRS EVRRIRGMFT GWNIRDEDLF GPYELMNFTL LDVYRDVFPS ASPSGLSNGA VAGIVLGSVA AAVTLTAIIA LIIMRKRMRG YSAVARRKRS
601: SKASLKIEGV KSFTYAELAL ATDNFNSSTQ IGQGGYGKVY KGTLGSGTVV AIKRAQEGSL QGEKEFLTEI ELLSRLHHRN LVSLLGFCDE EGEQMLVYEY
701: MENGTLRDNI SVKLKEPLDF AMRLRIALGS AKGILYLHTE ANPPIFHRDI KASNILLDSR FTAKVADFGL SRLAPVPDME GISPQHVSTV VKGTPGYLDP
801: EYFLTHQLTD KSDVYSLGVV LLELFTGMQP ITHGKNIVRE INIAYESGSI LSTVDKRMSS VPDECLEKFA TLALRCCREE TDARPSMAEV VRELEIIWEL
901: MPESHVAKTA DLSETMTHPS SSSNSSIMKH HYTSMDVSGS DLVSGVAPSV APR
Arabidopsis Description
Probable LRR receptor-like serine/threonine-protein kinase At1g06840 [Source:UniProtKB/Swiss-Prot;Acc:C0LGD7]
SUBAcon: [plasma membrane,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.