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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 7
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d041773_P002 Maize extracellular 89.98 88.7
TraesCS3B01G110500.1 Wheat plasma membrane 79.24 80.15
TraesCS3A01G095000.1 Wheat plasma membrane 78.1 79.41
TraesCS3D01G095200.1 Wheat plasma membrane 78.41 79.31
HORVU3Hr1G017020.28 Barley plasma membrane 77.89 76.78
Os12t0210400-01 Rice plasma membrane 75.93 76.01
GSMUA_Achr9P02530_001 Banana plasma membrane 58.37 59.54
KXG39452 Sorghum plasma membrane 49.07 48.37
KXG22231 Sorghum plasma membrane 47.83 47.49
KXG33608 Sorghum plasma membrane 46.49 47.17
OQU87749 Sorghum plasma membrane 44.63 46.15
OQU77613 Sorghum plasma membrane 44.42 45.65
KXG25749 Sorghum plastid 25.52 33.84
EES03800 Sorghum plasma membrane 32.85 33.58
EER95499 Sorghum plastid 14.67 33.33
EES18391 Sorghum plasma membrane 32.44 33.3
OQU81903 Sorghum extracellular, plastid 14.46 32.56
EES07775 Sorghum plastid 15.6 32.47
KXG33712 Sorghum plastid 13.74 29.04
EER91847 Sorghum plasma membrane 15.5 28.09
EER90604 Sorghum plastid 12.6 27.98
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.8.1Gene3D:3.30.200.20Gene3D:3.80.10.10EntrezGene:8058136UniProt:A0A1B6PCA7
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740
GO:GO:0019538InterPro:IPR000719InterPro:IPR032675EnsemblPlants:KXG23247ProteinID:KXG23247ProteinID:KXG23247.1
InterPro:Kinase-like_dom_sfInterPro:LRR_dom_sfPFAM:PF07714ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011
PANTHER:PTHR27003PANTHER:PTHR27003:SF134InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220EnsemblPlantsGene:SORBI_3008G074500
SUPFAM:SSF52058SUPFAM:SSF56112unigene:Sbi.15986InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI00081ACE0FSEG:seg:::
Description
hypothetical protein
Coordinates
chr8:+:10791441..10797006
Molecular Weight (calculated)
105072.0 Da
IEP (calculated)
6.781
GRAVY (calculated)
-0.192
Length
968 amino acids
Sequence
(BLAST)
001: MELSPWLVFS FGFLAQALVI LADTNVQDTA GLNGIKDSWN KKPSNWVGTD PCGDKWIGID CTGDRVTSIR LSSLGLSGSL SGDIQSLSEL QTLDFSYNKD
101: LGGPLPASIG SLSNLENLII VGCSFSGEIP KELGQLSKLI FLSMNSNKFS GSIPPSLGRL SKLYWFDLAD NKLSGELPVF DGTNPGLDNL TNTKHFHFGI
201: NQLSGTIPSQ IFNSHMKLIH LLLDNNNFTG SIPSTLGLLN TLEVLRFDNN YQLTGSVPSN INNLTKLAEL HLENNKLNGP LPDLTGMIAL SFVDMSNNSF
301: NASDVPSWFT TLPSLTSLYL ENLRVTGQLP QDLFSLPAIQ TLRLRGNRFN GTLTIGSDFS TQLQLIDLRD NDISQITVGG SQYNKQLILV GNPICSSGSN
401: EKYCTPPGQS NQATPPPYST AKNCSGLPPP CLSGSGQLLS PSCACAVPYR GTLFFRSPSF SDLSNGSYWG QLESGIKAKY LSLSLPVDSV AIHDPSVNSV
501: NNLQVALEVF PGGKTMFSEQ DISDIAFVLS NQTYKPPSVF GPYYFNGQQY SFANELLIPS KSKSNNLPLI IGVSAGGAVL VAGVVALVIC VARRKKKKRP
601: KQNEERSQSF VSWDMKSTSG GSSSIPQLRG ARMFSFDELR KITNNFSEAN DIGNGGYGKV YRGTLPTGQL VAVKRSQQGS LQGSLEFRTE IELLSRVHHK
701: NVVSLVGFCL DQAEQILVYE YVPNGTLKES LTGKSGVRLD WRRRLRVVLG AAKGVAYLHE LADPPIVHRD IKSSNVLLDE RLNAKVSDFG LSKPLGDDGR
801: GQVTTQVKGT MGYLDPEYYM TQQLTEKSDV YSFGVLMLEV ATARKPLERG RYIVREMKAA LDRTKDLYGL HDLLDPVLCA APSAPEGMEQ YVDLALRCVE
901: EAGADRPSMG EVVSEIERVL KMAGGAGPES ASNSMSYASR TPRHPYGGDS PFADYSSAGL PSARVEPK
Best Arabidopsis Sequence Match ( AT5G49760.1 )
(BLAST)
001: MSSRTGASLL LILFFFQICS VSALTNGLDA SALNALKSEW TTPPDGWEGS DPCGTNWVGI TCQNDRVVSI SLGNLDLEGK LPADISFLSE LRILDLSYNP
101: KLSGPLPPNI GNLGKLRNLI LVGCSFSGQI PESIGTLKEL IYLSLNLNKF SGTIPPSIGL LSKLYWFDIA DNQIEGELPV SNGTSAPGLD MLLQTKHFHF
201: GKNKLSGNIP KELFSSNMSL IHVLFDGNQF TGEIPETLSL VKTLTVLRLD RNKLIGDIPS YLNNLTNLNE LYLANNRFTG TLPNLTSLTS LYTLDVSNNT
301: LDFSPIPSWI SSLPSLSTLR MEGIQLNGPI PISFFSPPQL QTVILKRNSI VESLDFGTDV SSQLEFVDLQ YNEITDYKPS ANKVLQVILA NNPVCLEAGN
401: GPSYCSAIQH NTSFSTLPTN CSPCEPGMEA SPTCRCAYPF MGTLYFRSPS FSGLFNSTNF SILQKAIADF FKKFNYPVDS VGVRNIRENP TDHQLLIDLL
501: VFPLGRESFN QTGMSLVGFA FSNQTYKPPP IFGPYIFKAD LYKQFSDVEV SSKSSNKSIL IGAVVGVVVL LLLLTIAGIY ALRQKKRAER ATGQNNPFAK
601: WDTSKSSIDA PQLMGAKAFT FEELKKCTDN FSEANDVGGG GYGKVYRGIL PNGQLIAIKR AQQGSLQGGL EFKTEIELLS RVHHKNVVRL LGFCFDRNEQ
701: MLVYEYISNG SLKDSLSGKS GIRLDWTRRL KIALGSGKGL AYLHELADPP IIHRDIKSNN ILLDENLTAK VADFGLSKLV GDPEKTHVTT QVKGTMGYLD
801: PEYYMTNQLT EKSDVYGFGV VLLELLTGRS PIERGKYVVR EVKTKMNKSR SLYDLQELLD TTIIASSGNL KGFEKYVDLA LRCVEEEGVN RPSMGEVVKE
901: IENIMQLAGL NPNSDSATSS RTYEDAIKGS GDPYGSESFQ YSGNFPASKL EPQ
Arabidopsis Description
At5g49760 [Source:UniProtKB/TrEMBL;Acc:Q8GZ99]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.