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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 9
  • golgi 5
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d038494_P015 Maize plasma membrane 93.85 93.85
Zm00001d038503_P007 Maize plasma membrane 93.21 93.21
TraesCS1B01G312800.1 Wheat plasma membrane 80.91 80.74
TraesCS1D01G302000.1 Wheat plasma membrane 80.7 80.53
TraesCS1A01G302600.2 Wheat plasma membrane 80.49 80.32
HORVU0Hr1G001070.1 Barley plasma membrane 80.06 79.89
HORVU1Hr1G069400.2 Barley plasma membrane 80.06 79.89
Os05t0481100-04 Rice plasma membrane 78.05 77.31
EES03800 Sorghum plasma membrane 72.22 71.91
GSMUA_Achr4P00140_001 Banana plasma membrane 64.37 64.99
KXG25749 Sorghum plastid 46.24 59.73
KXG33608 Sorghum plasma membrane 35.31 34.91
OQU87749 Sorghum plasma membrane 34.46 34.72
OQU77613 Sorghum plasma membrane 34.25 34.29
KXG39452 Sorghum plasma membrane 35.21 33.81
KXG22231 Sorghum plasma membrane 34.78 33.64
EER95499 Sorghum plastid 14.95 33.1
EES07775 Sorghum plastid 16.22 32.9
KXG23247 Sorghum plasma membrane 33.3 32.44
OQU81903 Sorghum extracellular, plastid 14.42 31.63
KXG33712 Sorghum plastid 14.63 30.13
EER91847 Sorghum plasma membrane 16.22 28.65
EER90604 Sorghum plastid 12.62 27.29
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.8.1Gene3D:3.30.200.20Gene3D:3.80.10.10EntrezGene:8077011UniProt:C5YZU5
EnsemblPlants:EES18391ProteinID:EES18391ProteinID:EES18391.2ProteinID:EES18400.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538InterPro:IPR000719
InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfPFAM:PF00069PFAM:PF08263
ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27003PANTHER:PTHR27003:SF256InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BSSMART:SM00220EnsemblPlantsGene:SORBI_3009G175600SUPFAM:SSF52058SUPFAM:SSF56112unigene:Sbi.12425
unigene:Sbi.6466InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0001A889E2RefSeq:XP_002439970.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr9:+:53080742..53090639
Molecular Weight (calculated)
103385.0 Da
IEP (calculated)
5.852
GRAVY (calculated)
-0.038
Length
943 amino acids
Sequence
(BLAST)
001: MAKFGDVLCA FTLLVLLPCS DVALGQTTDP SEVDGLRAIK GRLVDPMNNL ENWNRGDPCQ SNWTGVFCHK VNDDAFLHVT ELQLFKRNLS GTLAPEVSLL
101: SQLKTLDFMW NNLSGSIPKE IGNIATLKLI LLNGNQLSGI LPDEIGNLQS LNRLQVDQNQ LSGPIPKSFS NLRSVKHLHM NNNSLSGAIP SELSRLPLLL
201: HLLVDNNNLS GPLPPELAEA PALKIFQADN NDFSGSSIPT TYSNISTLLK LSLRNCSLQG AIPDLSSIPQ LGYLDISWNQ LTGSIPTNKL ASNITTIDLS
301: HNMLNGTIPQ NFSGLPNLQI LSLEDNYLNG SVPSTIWNGI RLTGSRSLIL DFQNNSLKTI PAAFDPPPNV TVMLYGNPVC EDTNGALITN LCQPMSVNMQ
401: TSKNEQGYSC QPCPTDKNFE YNPSSPIPCF CAVPLGFGLR LKSPGITDFR PYEDAFEINL TSLLQLFLYQ LNIESYIWEV GPRLNMHMKL FPSNSSLFNT
501: SEIVRLRHIL AGWEITLSDV FGPYELLNFT LGSYADEFPN AASTGLSKAA LVSILVSSIA GAILLSVVAT MLIVRRRSRH RTVSKRSLSR FSVKIDGVRC
601: FAFEEMAIAT NNFDLSAQVG QGGYGKVYKG ILADGAVVAI KRAHEDSLQG SREFCTEIEL LSRLHHRNLV SLVGYCDEKD EQMLVYEFMS NGTLRDHLSA
701: KSKRPLSFGL RLKIALGAAK GILYLHTEAD PPIFHRDVKA SNILLDSKFV AKVADFGLSR LAPVPDVEGT LPAHVSTVVK GTPGYLDPEY FLTHKLTDKS
801: DVYSLGVVFL EMLTGMKPIE HGKNIVREVN SACQSGSVSE IIDGRMGLYP PECIRRFLSL ATKCCQDETD DRPSMWEIVR ELELILRMMP EEDVILLETS
901: ETDSTDVSKS LSTSATGTLF ISSQASGSLD ASSGMISGRV TPR
Best Arabidopsis Sequence Match ( AT1G06840.1 )
(BLAST)
001: MFSTHHVSRL LIPLLFFFLF CCFSSTFAQD DITNPVEVRA LRVIKESLND PVHRLRNWKH GDPCNSNWTG VVCFNSTLDD GYLHVSELQL FSMNLSGNLS
101: PELGRLSRLT ILSFMWNKIT GSIPKEIGNI KSLELLLLNG NLLNGNLPEE LGFLPNLDRI QIDENRISGP LPKSFANLNK TKHFHMNNNS ISGQIPPELG
201: SLPSIVHILL DNNNLSGYLP PELSNMPRLL ILQLDNNHFD GTTIPQSYGN MSKLLKMSLR NCSLQGPVPD LSSIPNLGYL DLSQNQLNGS IPAGKLSDSI
301: TTIDLSNNSL TGTIPTNFSG LPRLQKLSLA NNALSGSIPS RIWQERELNS TESIIVDLRN NGFSNISGRS DLRPNVTVWL QGNPLCSDGN LLRLCGPITE
401: EDINQGSTNS NTTICSDCPP PYEFSPEPLR RCFCAAPLLV GYRLKSPGFS DFVPYRSEFE QYITSGLSLN LYQLRLDSFQ WQKGPRLRMY LKFFPVFGSN
501: ANNSFIFNRS EVRRIRGMFT GWNIRDEDLF GPYELMNFTL LDVYRDVFPS ASPSGLSNGA VAGIVLGSVA AAVTLTAIIA LIIMRKRMRG YSAVARRKRS
601: SKASLKIEGV KSFTYAELAL ATDNFNSSTQ IGQGGYGKVY KGTLGSGTVV AIKRAQEGSL QGEKEFLTEI ELLSRLHHRN LVSLLGFCDE EGEQMLVYEY
701: MENGTLRDNI SVKLKEPLDF AMRLRIALGS AKGILYLHTE ANPPIFHRDI KASNILLDSR FTAKVADFGL SRLAPVPDME GISPQHVSTV VKGTPGYLDP
801: EYFLTHQLTD KSDVYSLGVV LLELFTGMQP ITHGKNIVRE INIAYESGSI LSTVDKRMSS VPDECLEKFA TLALRCCREE TDARPSMAEV VRELEIIWEL
901: MPESHVAKTA DLSETMTHPS SSSNSSIMKH HYTSMDVSGS DLVSGVAPSV APR
Arabidopsis Description
Probable LRR receptor-like serine/threonine-protein kinase At1g06840 [Source:UniProtKB/Swiss-Prot;Acc:C0LGD7]
SUBAcon: [plasma membrane,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.