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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 4
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d038522_P002 Maize plasma membrane 91.38 91.48
Os05t0486100-01 Rice plasma membrane 72.92 73.37
TraesCS1B01G314700.1 Wheat plasma membrane 71.69 72.51
HORVU1Hr1G069100.5 Barley plasma membrane 71.49 72.38
TraesCS1D01G303700.1 Wheat plasma membrane 71.18 71.99
TraesCS1A01G304200.1 Wheat plasma membrane 70.87 71.68
OQU87749 Sorghum plasma membrane 64.92 67.63
GSMUA_AchrUn_... Banana plasma membrane 55.69 60.47
KXG33608 Sorghum plasma membrane 57.03 58.28
GSMUA_AchrUn_... Banana plasma membrane 57.54 56.33
KXG39452 Sorghum plasma membrane 56.62 56.21
KXG23247 Sorghum plasma membrane 47.49 47.83
OQU77613 Sorghum plasma membrane 45.95 47.56
EES18391 Sorghum plasma membrane 33.64 34.78
EER95499 Sorghum plastid 15.08 34.51
EES03800 Sorghum plasma membrane 33.44 34.42
KXG25749 Sorghum plastid 25.74 34.38
OQU81903 Sorghum extracellular, plastid 14.36 32.56
EES07775 Sorghum plastid 15.38 32.26
KXG33712 Sorghum plastid 14.05 29.91
EER91847 Sorghum plasma membrane 15.38 28.09
EER90604 Sorghum plastid 11.9 26.61
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.8.1Gene3D:3.30.200.20Gene3D:3.80.10.10UniProt:A0A1B6P9I0GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005515
GO:GO:0005524GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740
GO:GO:0019538InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675EnsemblPlants:KXG22231ProteinID:KXG22231
ProteinID:KXG22231.1InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptPFAM:PF07714
PFAM:PF08263PFAM:PF13855ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PFscan:PS51450
PANTHER:PTHR27003PANTHER:PTHR27003:SF113InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220EnsemblPlantsGene:SORBI_3009G177400
SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI00081AC126SEG:seg::::
Description
hypothetical protein
Coordinates
chr9:-:53223217..53229404
Molecular Weight (calculated)
104881.0 Da
IEP (calculated)
6.902
GRAVY (calculated)
-0.089
Length
975 amino acids
Sequence
(BLAST)
001: MEEATRRRVT STALLLALVV LAASAPAGFC AINSQDGSAL NALKSQWTNA PSSWSSASDP CDGGWDGVMC NNGRVTSLRL SSVNIQGTLS DSIGQLTQLV
101: YLDVSFNIGL NGRMPATIGN LAELTTLILA GCSFTGSIPP ELGNLQKLTF LALNSNKFTG TIPPQLGLLS SLFWLDLADN QLTGSIPVTT ANTPGLDQLI
201: HTKHFHFNKN QLSGTLTGLF NSNMSLIHVL FDSNQLTGSI PEELGGVSTL QVLRLDRNSL RGAIPPNISN LVNLNELNLA SNQLTGSLPD LSSMTQLNVV
301: DLSNNSFAVS VAPNWFSTLT SLTSVSISSG RLSGVVPKGL FTLPQLQQVV LNNNAFNGTL EVTGNINKQL QTINLMNNNI VAANVTPSYN KTLVLVGNPG
401: CQDPDLKSFC SLKQESMIAY NTSLSKCSST DSCSSDQSLN PANCGCAYPY AGKMVFRAPL FTDLTNSATF QQLETSLTQQ LSLRDGSVSL SDIHFNSDNY
501: LQIQVALFPS TAASFSVPDL IRIGFDLSNQ TYKPPPNFGP YYFIADTYAL LAGAASSGSK KSQISTGAIA GIAVAGGLLV IALIGMVLFA LRQKRRVKEV
601: TGRTDPFASW GVSHKDSGGA PQLKGARLFS LNELKTCTNN FSDTHEIGSG GYGKVYKGTL VDGTRVAIKR AERGSMQGVV EFKNEIELLS RVHHRNLVSL
701: IGFCYEQGEQ MLVYEYVSNG TLRENLLVRG TYLDWKKRLR IALGSARGLA YLHELADPPI IHRDVKSTNI LLDDHLKAKV ADFGLSKLVA DTQKGHVSTQ
801: VKGTLGYLDP EYYMTQQLSE KSDVYSFGVV MLELVSGRQP IESGKYIVRE VRMAIDANDR DHYGLRGLLD PAIRDNARTA GFRRFVQLAM RCVDESAAAR
901: PAMGEVVKEI EAMLQNEVAG ADGGGATSSA NSSANEFDGA GGGARSHPYS DTEITRGSYG DNASDYMPYF EVKPK
Best Arabidopsis Sequence Match ( AT1G79620.1 )
(BLAST)
001: MVGSNTVTAT SRLLLICFAY SFTVFSMISS VTDPRDAAAL RSLMDQWDNT PPSWGGSDDP CGTPWEGVSC NNSRITALGL STMGLKGRLS GDIGELAELR
101: SLDLSFNRGL TGSLTSRLGD LQKLNILILA GCGFTGTIPN ELGYLKDLSF LALNSNNFTG KIPASLGNLT KVYWLDLADN QLTGPIPISS GSSPGLDLLL
201: KAKHFHFNKN QLSGTIPPKL FSSEMILIHV LFDGNRFTGS IPSTLGLIQT LEVLRLDRNT LTGKVPENLS NLTNIIELNL AHNKLVGSLP DLSDMKSMNY
301: VDLSNNSFDP SESPLWFSTL PSLTTLVMEY GSLQGPLPNK LFGFPQLQQV RLKKNAFNGT LSLGDTVGPE LQLVDLQDND ISSVTLSSGY TNTLILEGNP
401: VCTTALSNTN YCQIQQQQVK RIYSTSLANC GGKSCPLDQK VSPQSCECAY PYEGTLYFRG PMFRDLSNVN TYHSLEMSLW VKLGLTPGSV SLQNPFFNND
501: DYLQIQLALF PPMGKYFNRT EVQRIGFDLS NQTYKPPPLF GPYYFIASPY TFPADGNGHS LSSRMVTGII TGCSALVLCL VALGIYAMWQ KRRAEQAIGL
601: SRPFVSWASS GKDSGGAPQL KGARWFSYEE LKKITNNFSV SSELGYGGYG KVYKGMLQDG HMVAIKRAQQ GSTQGGLEFK TEIELLSRVH HKNLVGLVGF
701: CFEQGEQILV YEYMSNGSLK DSLTGRSGIT LDWKRRLRVA LGSARGLAYL HELADPPIIH RDVKSTNILL DENLTAKVAD FGLSKLVSDC TKGHVSTQVK
801: GTLGYLDPEY YTTQKLTEKS DVYSFGVVMM ELITAKQPIE KGKYIVREIK LVMNKSDDDF YGLRDKMDRS LRDVGTLPEL GRYMELALKC VDETADERPT
901: MSEVVKEIEI IIQNSGASSS SSASASSSAT DFGEKLLYGG TLKKKEARDG DGGGAFDYSG GYSVPTKIEP K
Arabidopsis Description
Leucine-rich repeat protein kinase family protein [Source:TAIR;Acc:AT1G79620]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.