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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 10
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
EpiLoc:plasma membrane
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
 plasma membrane: 18260611
plasma membrane: 19526560
extracellular: 21255809
extracellular: 24083427
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 18260611 doi
SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic
Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au
msms PMID: 21255809 doi
T Shinano, S Komatsu, T Yoshimura, S Tokutake, FJ Kong, T Watanabe, J Wasaki, M Osaki
National Agriculture and Food Research Organization, National Agricultural Research Center for Hokkaido Region, 1-Hitsujigaoka, Toyohira-ku, Sapporo 062-8555, Japan. shinano@affrc.go.jp
msms PMID: 24083427 doi
T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu
Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.
msms PMID: 19526560 doi
Y Cheng, Y Qi, Q Zhu, X Chen, N Wang, X Zhao, H Chen, X Cui, L Xu, W Zhang
Department of Biochemistry and Molecular Biology, College of Life Science, Nanjing Agricultural University, Nanjing, Jiangsu, PR China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG22231 Sorghum plasma membrane 73.37 72.92
Zm00001d038522_P002 Maize plasma membrane 72.96 72.59
HORVU1Hr1G069100.5 Barley plasma membrane 72.03 72.48
TraesCS1A01G304200.1 Wheat plasma membrane 71.83 72.2
TraesCS1D01G303700.1 Wheat plasma membrane 71.62 71.99
TraesCS1B01G314700.1 Wheat plasma membrane 71.52 71.89
GSMUA_AchrUn_... Banana plasma membrane 55.31 59.69
Os01t0816600-01 Rice extracellular, plasma membrane 56.76 58.82
Os03t0329700-01 Rice plasma membrane 56.35 56.0
GSMUA_AchrUn_... Banana plasma membrane 57.38 55.82
Os05t0305900-01 Rice plasma membrane 46.85 48.14
Os12t0210400-01 Rice plasma membrane 47.78 47.88
Os11t0245200-01 Rice plasma membrane 46.03 45.88
Os01t0818600-01 Rice plasma membrane 20.12 36.79
Os01t0960400-01 Rice plasma membrane 34.06 34.66
Os03t0148700-01 Rice plasma membrane 15.17 34.19
Os05t0481100-04 Rice plasma membrane 32.51 33.09
Os02t0821400-01 Rice cytosol, mitochondrion, nucleus, plastid 14.96 30.72
Os03t0825800-01 Rice plasma membrane 13.21 28.89
Os09t0123300-01 Rice plasma membrane 15.58 28.71
Os01t0818700-01 Rice plastid 12.07 27.15
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.8.1Gene3D:3.30.200.20Gene3D:3.80.10.10EntrezGene:4339142ProteinID:BAF17791.1
ProteinID:BAS94615.1ProteinID:EEE64157.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0004674GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0006464
GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538InterPro:IPR000719InterPro:IPR001611
InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptEnsemblPlantsGene:Os05g0486100
EnsemblPlants:Os05t0486100-01PFAM:PF07714PFAM:PF08263ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011
PFscan:PS51450PANTHER:PTHR27003PANTHER:PTHR27003:SF113InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSUniProt:Q0DH82
SMART:SM00220SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI0000E12549RefSeq:XP_015640180.1SEG:seg::
Description
leucine-rich repeat receptor-like kinase 1Leucine-rich repeat receptor-like kinase, Mn<sup>2+</sup>/Mg<sup>2+</sup>-dependent serine/threonine (Ser/Thr) kinase, Ca<sup>2+</sup>-independent Ser/Thr kinase, Negative regulation of polar auxin transport, Root development (Os05t0486100-01);Hypothetical conserved gene. (Os05t0486100-02)
Coordinates
chr5:-:23899488..23905448
Molecular Weight (calculated)
104100.0 Da
IEP (calculated)
6.902
GRAVY (calculated)
-0.066
Length
969 amino acids
Sequence
(BLAST)
001: MEPRVLMALA LVVVAAGVPA VLCQTNAQDA AALEGLKSQW TNYPLSWNSG DPCGGGWDGI MCTNGRVTTL RLSSVSLQGT LSSSIGQLGQ LTYLDLSFNI
101: NLGGPLPAEI GNLGELTTLI LAGCSFTGNI PIAIGNLRKL GFLALNSNKF SGGIPSSIGV LTNLLWLDLA DNQLTGSVPI STSTSPGLDQ LVKTQHFHFN
201: KNQLTGTLTG LFNSNMTLIH ILFDSNKFSG SIPAEVGTVS TLEVLRLDRN GFTGAIPATI GSLVKLNELN LANNKLTGSV PDLSNMTNLN VVDLSNNTFD
301: PSVAPSWFTS LTSLASVSIV SGSLSGQVPK GLFTLPTLQQ VVLSNNQFNG TLEITGNISS SLQTVNLMDN RIVSTDTASY KKTLLLAGNP FCAEQDPNNR
401: AFCSRQLQNA SPYSTSMEKC GSAQCSDGQN VNPASCGCAF SYNGKMVFRA PFFVDLVSST PFQLLESTMA AKLNLLPGSV ALSDIHFNSD NYLQVQVKLF
501: PTSGVTFNLS ELTRIGSSLS NQIYKPPANF GPYFFIADPY APLAVALGGK KSKMSTGAIA GIAVAGGVLV IALIFMSLFA LRQKRRAKEL KERADPFASW
601: AAGQKDSGGA PQLKGARFFS FDELKICTNN FSDNHEIGSG GYGKVYRGIL GDGTRVAIKR ADRNSMQGAV EFKNEIELLS RVHHRNLVSL IGFCYEQGEQ
701: MLVYEYISNG TLRENLTGSG MYLDWKKRLR IALGSARGLA YLHELADPPI IHRDIKSTNI LLDNNLKAKV ADFGLSKLVA DTEKGHVSTQ VKGTLGYLDP
801: EYYMTQQLSE KSDVYSFGVV MLELVSGRQP IEKGRYVVRE VRLAIDPADH DHHYGLRGIV DPAIRDAART PVFRRFVQLA MRCVDESAAA RPAMGAVVKE
901: IEAMLQNEPD DAGAGEGDSS ADPSANEFDR HRGGGGPPAH PYSDVEISRG SYAGDGASDY MPYFEVKPK
Best Arabidopsis Sequence Match ( AT1G79620.1 )
(BLAST)
001: MVGSNTVTAT SRLLLICFAY SFTVFSMISS VTDPRDAAAL RSLMDQWDNT PPSWGGSDDP CGTPWEGVSC NNSRITALGL STMGLKGRLS GDIGELAELR
101: SLDLSFNRGL TGSLTSRLGD LQKLNILILA GCGFTGTIPN ELGYLKDLSF LALNSNNFTG KIPASLGNLT KVYWLDLADN QLTGPIPISS GSSPGLDLLL
201: KAKHFHFNKN QLSGTIPPKL FSSEMILIHV LFDGNRFTGS IPSTLGLIQT LEVLRLDRNT LTGKVPENLS NLTNIIELNL AHNKLVGSLP DLSDMKSMNY
301: VDLSNNSFDP SESPLWFSTL PSLTTLVMEY GSLQGPLPNK LFGFPQLQQV RLKKNAFNGT LSLGDTVGPE LQLVDLQDND ISSVTLSSGY TNTLILEGNP
401: VCTTALSNTN YCQIQQQQVK RIYSTSLANC GGKSCPLDQK VSPQSCECAY PYEGTLYFRG PMFRDLSNVN TYHSLEMSLW VKLGLTPGSV SLQNPFFNND
501: DYLQIQLALF PPMGKYFNRT EVQRIGFDLS NQTYKPPPLF GPYYFIASPY TFPADGNGHS LSSRMVTGII TGCSALVLCL VALGIYAMWQ KRRAEQAIGL
601: SRPFVSWASS GKDSGGAPQL KGARWFSYEE LKKITNNFSV SSELGYGGYG KVYKGMLQDG HMVAIKRAQQ GSTQGGLEFK TEIELLSRVH HKNLVGLVGF
701: CFEQGEQILV YEYMSNGSLK DSLTGRSGIT LDWKRRLRVA LGSARGLAYL HELADPPIIH RDVKSTNILL DENLTAKVAD FGLSKLVSDC TKGHVSTQVK
801: GTLGYLDPEY YTTQKLTEKS DVYSFGVVMM ELITAKQPIE KGKYIVREIK LVMNKSDDDF YGLRDKMDRS LRDVGTLPEL GRYMELALKC VDETADERPT
901: MSEVVKEIEI IIQNSGASSS SSASASSSAT DFGEKLLYGG TLKKKEARDG DGGGAFDYSG GYSVPTKIEP K
Arabidopsis Description
Leucine-rich repeat protein kinase family protein [Source:TAIR;Acc:AT1G79620]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.