Factsheet for Os12t0210400-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 10
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

plasma membrane: 18557835
extracellular: 23159799
extracellular: 24083427
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 18557835 doi

SA Whiteman, TS Nühse, DA Ashford, D Sanders, FJ Maathuis

Department of Biology Area 9, University of York, York YO10 5DD, UK.

msms PMID: 23159799 doi

SG Kim, Y Wang, KH Lee, ZY Park, J Park, J Wu, SJ Kwon, YH Lee, GK Agrawal, R Rakwal, ST Kim, KY Kang

Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju, 660-701, South Korea.

msms PMID: 24083427 doi

T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu

Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G110500.1	Wheat	plasma membrane	76.84	77.64
TraesCS3A01G095000.1	Wheat	plasma membrane	75.59	76.79
TraesCS3D01G095200.1	Wheat	plasma membrane	75.8	76.59
KXG23247	Sorghum	plasma membrane	76.01	75.93
HORVU3Hr1G017020.28	Barley	plasma membrane	75.9	74.75
Zm00001d041773_P002	Maize	extracellular	75.28	74.13
Os11t0245200-01	Rice	plasma membrane	68.36	68.0
GSMUA_Achr9P02530_001	Banana	plasma membrane	56.77	57.85
Os05t0486100-01	Rice	plasma membrane	47.88	47.78
Os03t0329700-01	Rice	plasma membrane	48.09	47.69
Os01t0816600-01	Rice	extracellular, plasma membrane	45.6	47.17
Os05t0305900-01	Rice	plasma membrane	43.85	44.96
Os01t0818600-01	Rice	plasma membrane	19.13	34.91
Os01t0960400-01	Rice	plasma membrane	33.82	34.35
Os03t0148700-01	Rice	plasma membrane	14.79	33.26
Os05t0481100-04	Rice	plasma membrane	32.16	32.67
Os02t0821400-01	Rice	cytosol, mitochondrion, nucleus, plastid	15.41	31.57
Os09t0123300-01	Rice	plasma membrane	16.03	29.47
Os03t0825800-01	Rice	plasma membrane	13.44	29.35
Os01t0818700-01	Rice	plastid	11.69	26.22

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.8.1	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EntrezGene:4351777	ProteinID:ABA96703.1
EMBL:AK068774	ProteinID:BAF29419.1	ProteinID:BAT16317.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf
EnsemblPlantsGene:Os12g0210400	EnsemblPlants:Os12t0210400-01	PFAM:PF07714	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27003	PANTHER:PTHR27003:SF134	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	UniProt:Q2QW32	SMART:SM00220
SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI000068181C	RefSeq:XP_015619793.1	SEG:seg	:	:	:

Description

Protein kinase, core domain containing protein. (Os12t0210400-01)

Coordinates

chr12:+:5766036..5773224

Molecular Weight (calculated)

104243.0 Da

IEP (calculated)

6.968

GRAVY (calculated)

-0.135

Length

967 amino acids

Sequence
(BLAST)

001: MGVSPWIIIF LLIVLVQAFV ASADTNAQDT SGLNGLAGSW GSAPSNWAGN DPCGDKWIGI ICTGNRVTSI RLSSFGLSGT LSGDIQSLSE LQYLDLSYNK
101: NLNGPLPSTI GTLSKLQNLI LVGCGFTGEI PKEIGQLSNL IFLSLNSNKF TGSIPPSLGG LSKLYWFDLA DNQLTGGLPI SNATSPGLDN LTSTKHFHFG
201: INQLSGSIPS QIFNSNMKLI HLLLDNNKFS GSIPSTLGLL NTLEVLRFDN NAQLTGPVPT NLKNLTKLAE FHLANSNLTG PLPDLTGMSS LSFVDMSNNS
301: FSASDAPSWI TTLPSSLTSL YLENLRISGE VPQSLFSLPS IQTLRLRGNR LNGTLNIADF SSQLQLVDLR DNFITALTVG TQYKKTLMLS GNPYCNQVND
401: DVHCKATGQS NPALPPYKTT SNCPALPPTC LSTQQLSPTC ICSVPYRGTL FFRSPGFSDL GNSSYFIQLE GTMKAKFLNL SLPVDSIAIH DPFVDTNNNL
501: EMSLEVYPSG KDQFSEQDIS GIGFILSNQT YKPPSNFGPY YFLGQTYSFA NGALQTSKSN TNHIPLIVGA SVGGAAVIAA LLALTICIAR RKRSPKQTED
601: RSQSYVSWDI KSTSTSTAPQ VRGARMFSFD ELKKVTNNFS EANDIGTGGY GKVYRGTLPT GQLVAVKRSQ QGSLQGNLEF RTEIELLSRV HHKNVVSLVG
701: FCFDQGEQML VYEYVPNGTL KESLTGKSGV RLDWKRRLRV VLGAAKGIAY LHELADPPII HRDIKSSNVL LDERLNAKVS DFGLSKLLGE DGRGQITTQV
801: KGTMGYLDPE YYMTQQLTDR SDVYSFGVLL LEVITARKPL ERGRYVVREV KEAVDRRKDM YGLHELLDPA LGASSALAGL EPYVDLALRC VEESGADRPS
901: MGEAVAEIER IAKVAGAGGA AAAESAASDS MSYAASRTPR HPYGGGGGDS ASEYSGGGLP SMRVEPK

Best Arabidopsis Sequence Match ( AT5G49760.1 )
(BLAST)

001: MSSRTGASLL LILFFFQICS VSALTNGLDA SALNALKSEW TTPPDGWEGS DPCGTNWVGI TCQNDRVVSI SLGNLDLEGK LPADISFLSE LRILDLSYNP
101: KLSGPLPPNI GNLGKLRNLI LVGCSFSGQI PESIGTLKEL IYLSLNLNKF SGTIPPSIGL LSKLYWFDIA DNQIEGELPV SNGTSAPGLD MLLQTKHFHF
201: GKNKLSGNIP KELFSSNMSL IHVLFDGNQF TGEIPETLSL VKTLTVLRLD RNKLIGDIPS YLNNLTNLNE LYLANNRFTG TLPNLTSLTS LYTLDVSNNT
301: LDFSPIPSWI SSLPSLSTLR MEGIQLNGPI PISFFSPPQL QTVILKRNSI VESLDFGTDV SSQLEFVDLQ YNEITDYKPS ANKVLQVILA NNPVCLEAGN
401: GPSYCSAIQH NTSFSTLPTN CSPCEPGMEA SPTCRCAYPF MGTLYFRSPS FSGLFNSTNF SILQKAIADF FKKFNYPVDS VGVRNIRENP TDHQLLIDLL
501: VFPLGRESFN QTGMSLVGFA FSNQTYKPPP IFGPYIFKAD LYKQFSDVEV SSKSSNKSIL IGAVVGVVVL LLLLTIAGIY ALRQKKRAER ATGQNNPFAK
601: WDTSKSSIDA PQLMGAKAFT FEELKKCTDN FSEANDVGGG GYGKVYRGIL PNGQLIAIKR AQQGSLQGGL EFKTEIELLS RVHHKNVVRL LGFCFDRNEQ
701: MLVYEYISNG SLKDSLSGKS GIRLDWTRRL KIALGSGKGL AYLHELADPP IIHRDIKSNN ILLDENLTAK VADFGLSKLV GDPEKTHVTT QVKGTMGYLD
801: PEYYMTNQLT EKSDVYGFGV VLLELLTGRS PIERGKYVVR EVKTKMNKSR SLYDLQELLD TTIIASSGNL KGFEKYVDLA LRCVEEEGVN RPSMGEVVKE
901: IENIMQLAGL NPNSDSATSS RTYEDAIKGS GDPYGSESFQ YSGNFPASKL EPQ

Arabidopsis Description

At5g49760 [Source:UniProtKB/TrEMBL;Acc:Q8GZ99]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.