Factsheet for Os01t0960400-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

plasma membrane: 18557835
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 18557835 doi

SA Whiteman, TS Nühse, DA Ashford, D Sanders, FJ Maathuis

Department of Biology Area 9, University of York, York YO10 5DD, UK.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G129500.1	Wheat	plasma membrane	81.51	81.51
KXG25749	Sorghum	plastid	62.4	81.37
TraesCS7B01G030400.1	Wheat	plasma membrane	81.2	81.28
TraesCS3D01G542300.1	Wheat	plasma membrane	80.78	81.03
HORVU7Hr1G027310.14	Barley	plasma membrane	80.99	80.82
TraesCS3B01G602700.1	Wheat	plasma membrane	79.94	80.53
TraesCS7A01G130100.2	Wheat	plasma membrane	75.42	78.64
TraesCS3A01G536900.1	Wheat	extracellular	25.74	77.53
VIT_19s0014g05320.t01	Wine grape	cytosol	18.38	77.09
HORVU3Hr1G117890.7	Barley	plasma membrane	81.3	76.26
GSMUA_Achr6P32410_001	Banana	plasma membrane	68.07	68.72
Zm00001d004559_P021	Maize	plasma membrane	77.52	66.43
VIT_06s0004g08250.t01	Wine grape	plasma membrane	63.55	63.09
AT1G06840.1	Thale cress	plasma membrane, vacuole	61.66	61.59
Bra015533.1-P	Field mustard	plasma membrane	61.03	61.22
CDY54882	Canola	plasma membrane	61.03	61.22
CDY10230	Canola	plasma membrane	61.13	61.07
Solyc09g055570.2.1	Tomato	plasma membrane	59.56	60.97
Os01t0818600-01	Rice	plasma membrane	32.98	59.25
Os05t0481100-04	Rice	plasma membrane	58.51	58.51
Os01t0818700-01	Rice	plastid	23.84	52.67
Os03t0329700-01	Rice	plasma membrane	35.71	34.87
Os01t0816600-01	Rice	extracellular, plasma membrane	33.61	34.22
Os05t0486100-01	Rice	plasma membrane	34.66	34.06
Os11t0245200-01	Rice	plasma membrane	34.77	34.05
Os12t0210400-01	Rice	plasma membrane	34.35	33.82
Os05t0305900-01	Rice	plasma membrane	32.88	33.19
Os03t0148700-01	Rice	plasma membrane	13.87	30.7
Os02t0821400-01	Rice	cytosol, mitochondrion, nucleus, plastid	14.71	29.66
Os03t0825800-01	Rice	plasma membrane	12.82	27.54
Os09t0123300-01	Rice	plasma membrane	14.71	26.62

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.8.1	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EntrezGene:4325243	EMBL:AK111512
ProteinID:BAD87126.1	ProteinID:BAF07380.1	ProteinID:BAS76329.1	ProteinID:EEE56045.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf
InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	EnsemblPlantsGene:Os01g0960400	EnsemblPlants:Os01t0960400-01
PFAM:PF00069	PFAM:PF08263	PFAM:PF13855	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27003	PANTHER:PTHR27003:SF101	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	UniProt:Q5JN27	SMART:SM00220
SMART:SM00369	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI00004C28A7	RefSeq:XP_015649172.1	SEG:seg	:	:	:

Description

Protein kinase, core domain containing protein. (Os01t0960400-01);Similar to predicted protein. (Os01t0960400-02);Similar to Leucine-rich repeat transmembrane protein kinase. (Os01t0960400-03)

Coordinates

chr1:-:42336300..42348672

Molecular Weight (calculated)

105109.0 Da

IEP (calculated)

6.637

GRAVY (calculated)

-0.143

Length

952 amino acids

Sequence
(BLAST)

001: MRQSRLFYLC SIIFMFYLVQ RTEAQITAPW EVDALKAIKG NLIDPQGRLN NWNRGDPCMG NWSYVHCYNE TASDGYLHVL ELQLLKLNLS GSLAAELGRL
101: SHMQIMDFMW NNISGSIPKE VGNITSLKLL LLNGNQLTGS LPEEIGFLPN LDRIQIDQNY ISGPIPKSFA NLNKTKHFHM NNNSLSGQIP PELSRLPSLV
201: HLLLDNNNLS GYLPPELSKL PKLLIIQLDN NNFSGTSIPS SYGNITTLLK LSLRNCSLEG PVPDVSGIPQ LGYLDLSWNQ LRGSIPSGRP ASNITTIDLS
301: HNLLNGSIPG SFSGLPNLQR LSLDNNNLDG SVPSDVWRNI DFSGNRSLIL DFQNNSLTNL SNPLSPPANV TILLSGNPIC TSPNQLNITQ YCQSVPVIVP
401: DGSASNATVC PPCSTDLPFE NILMSPIRCI CAIPLYVDYR LKSPGFWDFV PYEGQFQQYL SSGLSLSSYQ LEVSQFMWEE GPRVKMNLKL FPNNTAYFNK
501: SEVLRLRGMF TGWLIPDSDI FGPYELLNFN PGWYNNLFPD RAKSSLSTGA IVGIVVAAFA AAAFLSSLIT LIILRRRSRY SSKRRSAKRI PMKIDGVKDF
601: SFQELSHGTN DFSDSALIGQ GGYGKVYRGI LSDGTIVAIK RAQQGSLQGS KEFFTEIELL SRLHHRNLVS LLGYCDEEDE QMLVYEFMPN GTLRDHLSAR
701: SKEPLNFPTR LRIALGSSRG ILYLHTEADP PIFHRDIKAS NILLDSKFVA KVADFGLSRL APEPESEGIA PGHVSTVIKG TPGYLDPEYF LTHKLTDKSD
801: VYSLGVVFLE LLTGMQPISH GRNIVREVVA ANQSGMILSV VDSRMGSYPA ECVEKFAALA LRCCRDETDA RPSIVEVMRE LEKIWQMTPD TGSMSSLSLE
901: PSNTATPSSG SRMMVSSSSG VGNDDHHHYN MSSSDVSGSN LLSGVVPSIN PR

Best Arabidopsis Sequence Match ( AT1G06840.1 )
(BLAST)

001: MFSTHHVSRL LIPLLFFFLF CCFSSTFAQD DITNPVEVRA LRVIKESLND PVHRLRNWKH GDPCNSNWTG VVCFNSTLDD GYLHVSELQL FSMNLSGNLS
101: PELGRLSRLT ILSFMWNKIT GSIPKEIGNI KSLELLLLNG NLLNGNLPEE LGFLPNLDRI QIDENRISGP LPKSFANLNK TKHFHMNNNS ISGQIPPELG
201: SLPSIVHILL DNNNLSGYLP PELSNMPRLL ILQLDNNHFD GTTIPQSYGN MSKLLKMSLR NCSLQGPVPD LSSIPNLGYL DLSQNQLNGS IPAGKLSDSI
301: TTIDLSNNSL TGTIPTNFSG LPRLQKLSLA NNALSGSIPS RIWQERELNS TESIIVDLRN NGFSNISGRS DLRPNVTVWL QGNPLCSDGN LLRLCGPITE
401: EDINQGSTNS NTTICSDCPP PYEFSPEPLR RCFCAAPLLV GYRLKSPGFS DFVPYRSEFE QYITSGLSLN LYQLRLDSFQ WQKGPRLRMY LKFFPVFGSN
501: ANNSFIFNRS EVRRIRGMFT GWNIRDEDLF GPYELMNFTL LDVYRDVFPS ASPSGLSNGA VAGIVLGSVA AAVTLTAIIA LIIMRKRMRG YSAVARRKRS
601: SKASLKIEGV KSFTYAELAL ATDNFNSSTQ IGQGGYGKVY KGTLGSGTVV AIKRAQEGSL QGEKEFLTEI ELLSRLHHRN LVSLLGFCDE EGEQMLVYEY
701: MENGTLRDNI SVKLKEPLDF AMRLRIALGS AKGILYLHTE ANPPIFHRDI KASNILLDSR FTAKVADFGL SRLAPVPDME GISPQHVSTV VKGTPGYLDP
801: EYFLTHQLTD KSDVYSLGVV LLELFTGMQP ITHGKNIVRE INIAYESGSI LSTVDKRMSS VPDECLEKFA TLALRCCREE TDARPSMAEV VRELEIIWEL
901: MPESHVAKTA DLSETMTHPS SSSNSSIMKH HYTSMDVSGS DLVSGVAPSV APR

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At1g06840 [Source:UniProtKB/Swiss-Prot;Acc:C0LGD7]
SUBAcon: [plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.