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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 8
  • golgi 4
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_19s0014g05320.t01 Wine grape cytosol 18.06 74.01
VIT_06s0004g08250.t01 Wine grape plasma membrane 68.28 66.21
Solyc10g054310.1.1 Tomato cytosol 5.38 64.94
CDY10230 Canola plasma membrane 65.48 63.9
Bra015533.1-P Field mustard plasma membrane 65.16 63.86
CDY54882 Canola plasma membrane 65.16 63.86
AT1G06840.1 Thale cress plasma membrane, vacuole 65.38 63.8
TraesCS3A01G536900.1 Wheat extracellular 21.29 62.66
GSMUA_Achr6P32410_001 Banana plasma membrane 63.01 62.14
Os01t0960400-01 Rice plasma membrane 60.97 59.56
TraesCS3D01G542300.1 Wheat plasma membrane 60.0 58.8
TraesCS3B01G602700.1 Wheat plasma membrane 59.57 58.62
HORVU7Hr1G027310.14 Barley plasma membrane 60.0 58.49
TraesCS7B01G030400.1 Wheat plasma membrane 59.68 58.36
TraesCS7D01G129500.1 Wheat plasma membrane 59.25 57.88
Solyc09g055180.2.1 Tomato cytosol, nucleus, plasma membrane 56.34 57.84
TraesCS7A01G130100.2 Wheat plasma membrane 56.34 57.39
KXG25749 Sorghum plastid 44.41 56.58
HORVU3Hr1G117890.7 Barley plasma membrane 60.32 55.27
Solyc10g074890.1.1 Tomato cytosol, nucleus, plasma membrane 53.66 55.14
Solyc10g074900.1.1 Tomato cytosol, plasma membrane, plastid 52.15 53.41
Solyc10g054300.1.1 Tomato cytosol, nucleus, plastid 9.25 52.12
Zm00001d004559_P021 Maize plasma membrane 58.82 49.23
Solyc10g085670.1.1 Tomato extracellular 34.41 33.2
Solyc01g102680.2.1 Tomato plasma membrane 33.01 31.98
Solyc01g102710.2.1 Tomato plasma membrane 32.26 31.55
Solyc01g102700.2.1 Tomato plasma membrane 32.9 29.94
Solyc10g012170.2.1 Tomato plastid 13.44 28.6
Solyc03g078470.2.1 Tomato cytosol 5.91 28.5
Solyc07g007780.2.1 Tomato nucleus 14.62 26.25
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.8.1Gene3D:3.30.200.20Gene3D:3.80.10.10GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575
GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538InterPro:IPR000719InterPro:IPR001611
InterPro:IPR032675UniProt:K4CT54InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rpt
PFAM:PF00069PFAM:PF07714PFAM:PF08263PFAM:PF13855ScanProsite:PS00107PFscan:PS50011
PANTHER:PTHR27003PANTHER:PTHR27003:SF101InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSUPFAM:SSF52058SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_domSignalP:SignalP-noTMEnsemblPlantsGene:Solyc09g055570.2EnsemblPlants:Solyc09g055570.2.1TMHMM:TMhelixUniParc:UPI000276AF5D
SEG:seg:::::
Description
No Description!
Coordinates
chr9:+:42200883..42216975
Molecular Weight (calculated)
102944.0 Da
IEP (calculated)
6.624
GRAVY (calculated)
-0.090
Length
930 amino acids
Sequence
(BLAST)
001: MSASKLSIIG ITLLLWYCCS LLLFTKANSQ TTHPDEVKAL RAIKNSLVDP NGNLSNWRRG DPCISNWTGV LCYNQTNNDG YFHVRELQLL DMDLSGNLSP
101: ELGRLSYMRI LDVMWNAISG TIPKEIGNIK TLELLLLNGN ELTGSLPEEL GYLPNLNRIQ IDQNHISGPL PVSFAKLEKA AHFHMNNNSI SGQIPPELSK
201: LPKLLHLLLD NNNLSGYLPP ELAQIPNLRI LQLDNNNFEG SHIPDSYGNM SRLLKLSLRN CSLQGPVPNL GNIPNLTYID LSLNELIGSI PSNMLSDNMT
301: TIDLSYNNLN GTIPSNFSSL PHLQKLSLEN NSLSGSVPSI IWQNRTLNAT ETLILDLRNN KLLNISGPLA IPQNVTVSLQ GNPLCSNSIL FNFCGPYNGD
401: AGGTLQLANN TDCPPLACPP PYEYALPYPT CFCALPLLIG YRLKSPGFRD FRSYMDQFKW YITIGLKLNI SQLHLNTFSL EAGPRVKMYL RIFPIFDDNN
501: SSRLFNKSEV LRLRSMFTGW LIPDNDLFGP YELINFTLLA DYREFIPPPS SSGISKGALA GIILGVIAGA VTISAFVSLL ILRLHMKKHH HASSKRSLLS
601: KISVKIDGVK EFNFEELTLA TKNFDNSSIV GQGGYGKVYQ GTLADGTAVA IKRAQEGSLQ GQKEFLTEIE LLSRLHHRNL VSLLGYCGEE GEQMLVYEFM
701: PNGTLRDHLS GKCKEPLSFA MRLKVALGSA KGILYLHTEA DPPIFHRDIK AIPDLEGTLP AHVSTVVKGT PGYLDPEYFL THKLTDKSDV YSLGVVFLEL
801: LTGMQPISHG KNIVREVNLA YRSGMIFNVI DDQMGSYPSE CVEKFINLAL KCCQEETEGR PSMVEVVREL ENIRVMMPES YSIIRDSVVT DSEKDSRTPS
901: STSAMKYPFV SADVSGSDLV SGVVPSINPR
Best Arabidopsis Sequence Match ( AT1G06840.1 )
(BLAST)
001: MFSTHHVSRL LIPLLFFFLF CCFSSTFAQD DITNPVEVRA LRVIKESLND PVHRLRNWKH GDPCNSNWTG VVCFNSTLDD GYLHVSELQL FSMNLSGNLS
101: PELGRLSRLT ILSFMWNKIT GSIPKEIGNI KSLELLLLNG NLLNGNLPEE LGFLPNLDRI QIDENRISGP LPKSFANLNK TKHFHMNNNS ISGQIPPELG
201: SLPSIVHILL DNNNLSGYLP PELSNMPRLL ILQLDNNHFD GTTIPQSYGN MSKLLKMSLR NCSLQGPVPD LSSIPNLGYL DLSQNQLNGS IPAGKLSDSI
301: TTIDLSNNSL TGTIPTNFSG LPRLQKLSLA NNALSGSIPS RIWQERELNS TESIIVDLRN NGFSNISGRS DLRPNVTVWL QGNPLCSDGN LLRLCGPITE
401: EDINQGSTNS NTTICSDCPP PYEFSPEPLR RCFCAAPLLV GYRLKSPGFS DFVPYRSEFE QYITSGLSLN LYQLRLDSFQ WQKGPRLRMY LKFFPVFGSN
501: ANNSFIFNRS EVRRIRGMFT GWNIRDEDLF GPYELMNFTL LDVYRDVFPS ASPSGLSNGA VAGIVLGSVA AAVTLTAIIA LIIMRKRMRG YSAVARRKRS
601: SKASLKIEGV KSFTYAELAL ATDNFNSSTQ IGQGGYGKVY KGTLGSGTVV AIKRAQEGSL QGEKEFLTEI ELLSRLHHRN LVSLLGFCDE EGEQMLVYEY
701: MENGTLRDNI SVKLKEPLDF AMRLRIALGS AKGILYLHTE ANPPIFHRDI KASNILLDSR FTAKVADFGL SRLAPVPDME GISPQHVSTV VKGTPGYLDP
801: EYFLTHQLTD KSDVYSLGVV LLELFTGMQP ITHGKNIVRE INIAYESGSI LSTVDKRMSS VPDECLEKFA TLALRCCREE TDARPSMAEV VRELEIIWEL
901: MPESHVAKTA DLSETMTHPS SSSNSSIMKH HYTSMDVSGS DLVSGVAPSV APR
Arabidopsis Description
Probable LRR receptor-like serine/threonine-protein kinase At1g06840 [Source:UniProtKB/Swiss-Prot;Acc:C0LGD7]
SUBAcon: [plasma membrane,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.