Factsheet for Solyc09g055180.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400016783	Potato	mitochondrion	75.61	94.88
Solyc10g074890.1.1	Tomato	cytosol, nucleus, plasma membrane	71.85	71.93
Solyc10g054300.1.1	Tomato	cytosol, nucleus, plastid	11.04	60.61
KRH00507	Soybean	plasma membrane	62.91	59.56
CDY61604	Canola	plasma membrane	61.92	59.55
CDY11171	Canola	plasma membrane	61.7	59.22
CDY57828	Canola	plasma membrane	61.7	59.22
KRH40653	Soybean	plasma membrane	62.36	59.1
Bra005661.1-P	Field mustard	plasma membrane	51.66	58.79
AT5G01950.7	Thale cress	plasma membrane	61.7	58.47
Solyc10g054310.1.1	Tomato	cytosol	4.97	58.44
Solyc09g055570.2.1	Tomato	plasma membrane	57.84	56.34
KRH00501	Soybean	plasma membrane	58.72	55.82
Solyc10g074900.1.1	Tomato	cytosol, plasma membrane, plastid	53.75	53.63
VIT_08s0056g00570.t01	Wine grape	plasma membrane	65.01	34.34
Solyc10g085670.1.1	Tomato	extracellular	35.21	33.09
Solyc01g102680.2.1	Tomato	plasma membrane	34.11	32.19
Solyc01g102710.2.1	Tomato	plasma membrane	33.11	31.55
Solyc10g012170.2.1	Tomato	plastid	14.57	30.21
Solyc01g102700.2.1	Tomato	plasma membrane	33.77	29.94
Solyc07g007780.2.1	Tomato	nucleus	16.34	28.57
Solyc03g078470.2.1	Tomato	cytosol	5.19	24.35

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.8.1	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR032675	UniProt:K4CT17
InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	PFAM:PF07714	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27003	PANTHER:PTHR27003:SF36	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF52058
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc09g055180.2	EnsemblPlants:Solyc09g055180.2.1	TMHMM:TMhelix
UniParc:UPI000276AD45	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr9:+:36914232..36924767

Molecular Weight (calculated)

100547.0 Da

IEP (calculated)

7.844

GRAVY (calculated)

-0.172

Length

906 amino acids

Sequence
(BLAST)

001: MKHLNNWKRG DPCTSHWTGV FCNISDADGY LHVRELRFMN MNLSGSLSPE LGQLSHLQIL NFMWNNLSGS IPKEIGSITT LKLLLLNGNQ LTGSLADELG
101: NLSNLNRFQI DQNEISGEIP KSFANLNKIR HIHFNNNSLS GQIPHELSNL STILHLLLDN NNLSGYLPTE FSALADLAIL QLDNNNFSGS EIPASYGNLS
201: SLLKLSVRNC SLEGSIPDFS RIANLSYLDL SWNQLSGSIP QNKLSNNMTT IILSHNRLNG SVPKNFSLLP SLQKLSLENN FLNGSVSTDI WQNKIFNTTS
301: RLVIDLRNNS VSNISGAFEP PVNVTLRFQS NPICSSTSIR NIGKYCGPDI GADDDEPSNS TNPTGVCPIH ACPTDNYYEY VPASPKPCFC ASPLRIGYRL
401: KSPSISYFDP YKQLFESYVT SSLQLDLYQL WIDSFFWEKG PRLRMYLKLF PVVGNNTFNE SEILRISEIF ASWEFRGSHL FGPYELLNFT LLGPYSHLNP
501: EIKGKKQSKG VVIAFIVAAG AFAAFVSSIV TLLITRRRAK YQNILSRKRL SSSLSIKVDG VKSFTFREMA SATNNFDTST QVGEGGYGSV FRGILADKTI
601: VAIKRAKVGS LQGQKEFLTE IELLSRLHHR NLVVLLGYCD EEGEQMLIYE FMPNGTLRDW LSAKCKKKLK FGARLGIALG ASKGILYLHT EADPPIFHRD
701: IKASNILLDS KLTAKVADFG LSRLAPVQDD EGLLPNHVST MVKGTPGYLD PEYFLTRKMT DKSDVYSLGV VFLEILTGMH PISHGKNIVR EVKIAHKSGV
801: MFSIMDKSMG SYPSECAERL MELALKCCQD KPEDRPSMLE VVRTLETTVQ MMPYTDTDPL DNKASFSEST SSASFSNTRS GDLFMSSSNV SGGDLISGVT
901: LNITPR

Best Arabidopsis Sequence Match ( AT5G01950.3 )
(BLAST)

001: MVFPQRLYLH ALLVACCCVL LLADAQRTHP SEVTALRSVK RSLLDPKDYL RNWNRGDPCR SNWTGVICFN EIGTDDYLHV RELLLMNMNL SGTLSPELQK
101: LAHLEILDFM WNNISGSIPN EIGQISSLVL LLLNGNKLSG TLPSELGYLS NLNRFQIDEN NITGPIPKSF SNLKKVKHLH FNNNSLTGQI PVELSNLTNI
201: FHVLLDNNKL SGNLPPQLSA LPNLQILQLD NNNFSGSDIP ASYGNFSNIL KLSLRNCSLK GALPDFSKIR HLKYLDLSWN ELTGPIPSSN FSKDVTTINL
301: SNNILNGSIP QSFSDLPLLQ MLLLKNNMLS GSVPDSLWKN ISFPKKARLL LDLRNNSLSR VQGDLTPPQN VTLRLDGNLI CTNGSISNAN LFCESKGKEW
401: ISLPNNSTNS ALDCPPLACP TPDFYEYSPA SPLRCFCAAP LRIGYRLKSP SFSYFPPYID QFGEYVTDFL QMEPYQLWID SYQWEKGPRL RMYLKLFPKV
501: NETYTRTFNE SEVLRIRGIF ASWRFPGSDL FGPYELLNFT LQGPYSYVNF NSERKGVSWR RLAAITAGAV VTAVAISAVV AALLLRRYSK HEREISRRRS
601: SSKASLLNSG IRGFSFKELA EATDDFSSST LVGRGGYGKV YRGVLSDNTV AAIKRADEGS LQGEKEFLNE IELLSRLHHR NLVSLIGYCD EESEQMLVYE
701: FMSNGTLRDW LSAKGKESLS FGMRIRVALG AAKGILYLHT EANPPVFHRD IKASNILLDP NFNAKVADFG LSRLAPVLED EEDVPKHVST VVRGTPGYLD
801: PEYFLTHKLT DKSDVYSIGV VFLELLTGMH AISHGKNIVR EVKTAEQRDM MVSLIDKRME PWSMESVEKF AALALRCSHD SPEMRPGMAE VVKELESLLQ
901: ASPDRETRVE LASSSSVLST SSSNVTRDLY ESSSLLGSDL SSGFVPSIAP R

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:TAIR;Acc:AT5G01950]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.