Factsheet for PGSC0003DMT400016783

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 5
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g055180.2.1	Tomato	cytosol, nucleus, plasma membrane	94.88	75.61
PGSC0003DMT400071263	Potato	cytosol	63.57	56.81
PGSC0003DMT400080229	Potato	plastid	33.93	47.3
KRH00507	Soybean	plasma membrane	60.66	45.77
Bra005661.1-P	Field mustard	plasma membrane	50.42	45.73
KRH40653	Soybean	plasma membrane	60.53	45.71
CDY61604	Canola	plasma membrane	58.17	44.59
CDY11171	Canola	plasma membrane	58.03	44.39
CDY57828	Canola	plasma membrane	58.03	44.39
AT5G01950.7	Thale cress	plasma membrane	58.59	44.25
KRH00501	Soybean	plasma membrane	57.2	43.34
PGSC0003DMT400049974	Potato	plastid	17.73	29.29
VIT_08s0056g00570.t01	Wine grape	plasma membrane	63.16	26.59
PGSC0003DMT400071814	Potato	plasma membrane	18.84	26.25
PGSC0003DMT400021662	Potato	plasma membrane	33.93	25.41
PGSC0003DMT400047464	Potato	cytosol	19.25	25.05
PGSC0003DMT400047023	Potato	plasma membrane	32.83	25.03
PGSC0003DMT400047024	Potato	plasma membrane	29.22	24.88

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.8.1	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR032675	InterPro:Kinase-like_dom_sf
InterPro:LRR_dom_sf	UniProt:M1A853	PFAM:PF07714	EnsemblPlantsGene:PGSC0003DMG400006563	PGSC:PGSC0003DMG400006563	EnsemblPlants:PGSC0003DMT400016783
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27003	PANTHER:PTHR27003:SF36	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
TMHMM:TMhelix	UniParc:UPI000294A17C	SEG:seg	:	:	:

Description

ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400006563]

Coordinates

chr00:-:9686676..9694382

Molecular Weight (calculated)

80434.8 Da

IEP (calculated)

8.571

GRAVY (calculated)

-0.166

Length

722 amino acids

Sequence
(BLAST)

001: MKLGPHLAHL LKIKCCFWYC RSVRNCSLQG SIPDFSRIAN LSYLDLSWNQ LSGSIPQNKL SNNMTTIILS HNRLNGSIPK NFSLLPSLQK LSLENNFLNG
101: SISTDIWQNK IFNTTSRLVI DLRNNSVSNI SGAFEPPVNV TLRFQSNPIC SSTSIRNIGK YCGPDFGADD DEPSNSTNPS GVCPIHACPT DNYYEYVPAS
201: PKPCFCASPL RIGYRLKSPS ISYFDPYKQL FESYVTSSLQ LDLYQLWIDS YFWEKGPRLR MYLKLFPVVG DNTFNESEIL RISEIFASWE FQGSHLFGPY
301: ELLNFTLLGP YSHLNPEMKG KRQSKGVVIA CIVAAGAFAA FVSSIATILI TRRRAKYQKI LSRKRLSSSL SIKVDGVKSF TFREMTSATN NFDTSTQVGE
401: GGYGSVFRGI LADKTVVAIK RAKVGSLQGQ KEFLTEIELL SRLHHRNLVV LLGYCDEEGE QMLIYEFMPN GTLRDWLSAK CKKNLKFGAR LGIALGASKG
501: ILYLHTEADP PIFHRDIKAS NILLDSKLTA KVADFGLSRL APVQDDEGLL PNHVSTMVKG TPGYLDPEYF LTRKMTDKSD VYSLGVVFLE ILTGMHPISH
601: GKNIVREVKM AHKSGVMFSI MDKNMGSYPS ECAEKMVELA LKCCQDKPED RPSMLEVVRT LETILQMMPY TDTDPLDNKA SFSETTSSAS FSNTRSGDLF
701: ISSSNVSGGD LISGVTLNIT PR

Best Arabidopsis Sequence Match ( AT5G01950.2 )
(BLAST)

001: MNMNLSGTLS PELQKLAHLE ILDFMWNNIS GSIPNEIGQI SSLVLLLLNG NKLSGTLPSE LGYLSNLNRF QIDENNITGP IPKSFSNLKK VKHLHFNNNS
101: LTGQIPVELS NLTNIFHVLL DNNKLSGNLP PQLSALPNLQ ILQLDNNNFS GSDIPASYGN FSNILKLSLR NCSLKGALPD FSKIRHLKYL DLSWNELTGP
201: IPSSNFSKDV TTINLSNNIL NGSIPQSFSD LPLLQMLLLK NNMLSGSVPD SLWKNISFPK KARLLLDLRN NSLSRVQGDL TPPQNVTLRL DGNLICTNGS
301: ISNANLFCES KGKEWISLPN NSTNSALDCP PLACPTPDFY EYSPASPLRC FCAAPLRIGY RLKSPSFSYF PPYIDQFGEY VTDFLQMEPY QLWIDSYQWE
401: KGPRLRMYLK LFPKVNETYT RTFNESEVLR IRGIFASWRF PGSDLFGPYE LLNFTLQGPY SYVNFNSERK GVSWRRLAAI TAGAVVTAVA ISAVVAALLL
501: RRYSKHEREI SRRRSSSKAS LLNSGIRGFS FKELAEATDD FSSSTLVGRG GYGKVYRGVL SDNTVAAIKR ADEGSLQGEK EFLNEIELLS RLHHRNLVSL
601: IGYCDEESEQ MLVYEFMSNG TLRDWLSAKG KESLSFGMRI RVALGAAKGI LYLHTEANPP VFHRDIKASN ILLDPNFNAK VADFGLSRLA PVLEDEEDVP
701: KHVSTVVRGT PGYLDPEYFL THKLTDKSDV YSIGVVFLEL LTGMHAISHG KNIVREVKTA EQRDMMVSLI DKRMEPWSME SVEKFAALAL RCSHDSPEMR
801: PGMAEVVKEL ESLLQASPDR ETRVELASSS SVLSTSSSNV TRDLYESSSL LGSDLSSGFV PSIAPR

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:TAIR;Acc:AT5G01950]
SUBAcon: [cytosol,nucleus,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.