Factsheet for PGSC0003DMT400071263

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g074890.1.1	Tomato	cytosol, nucleus, plasma membrane	97.4	86.96
PGSC0003DMT400016783	Potato	mitochondrion	56.81	63.57
KRH00507	Soybean	plasma membrane	61.01	51.52
KRH40653	Soybean	plasma membrane	60.02	50.73
Bra005661.1-P	Field mustard	plasma membrane	49.63	50.38
CDY61604	Canola	plasma membrane	58.29	50.0
CDY11171	Canola	plasma membrane	58.04	49.68
CDY57828	Canola	plasma membrane	58.04	49.68
AT5G01950.7	Thale cress	plasma membrane	58.66	49.58
KRH00501	Soybean	plasma membrane	55.94	47.43
PGSC0003DMT400080229	Potato	plastid	28.34	44.21
VIT_08s0056g00570.t01	Wine grape	plasma membrane	65.1	30.67
PGSC0003DMT400049974	Potato	plastid	16.46	30.43
PGSC0003DMT400047024	Potato	plasma membrane	31.93	30.42
PGSC0003DMT400021662	Potato	plasma membrane	35.64	29.88
PGSC0003DMT400047023	Potato	plasma membrane	33.66	28.72
PGSC0003DMT400071814	Potato	plasma membrane	17.95	27.99
PGSC0003DMT400047464	Potato	cytosol	16.34	23.78

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.8.1	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M1CNF8	PFAM:PF07714	PFAM:PF13855	EnsemblPlantsGene:PGSC0003DMG400027710	PGSC:PGSC0003DMG400027710
EnsemblPlants:PGSC0003DMT400071263	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51450	PANTHER:PTHR27003
PANTHER:PTHR27003:SF36	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SMART:SM00369	SUPFAM:SSF52058
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0002961F04	SEG:seg

Description

ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400027710]

Coordinates

chr10:-:48681448..48688961

Molecular Weight (calculated)

89991.3 Da

IEP (calculated)

6.938

GRAVY (calculated)

-0.131

Length

808 amino acids

Sequence
(BLAST)

001: MKYLEDWEKG DPCTSNWTGI HCFNKVGANG YLHIKELNFM WNDLTGSIPE EIGNIKSLKL LLLTGNKLSG SLSDQLGYLP NLRIFQIDEN QISGRIPKSF
101: SNLNSVQHIH FNNNTLIGQI PPELSNLSTL LHMLMDSNNL SGYLPPEFSI LPRLRIIQLD NNNFSRSEIP ASYGNMSSLV KLILSHNRLD GSIPESFSSL
201: PLLQKLDLRN NSLSDISGTL EPPLNVTLRL QGNPVCRNEN VRNIVKFCGS EAGAEHKTNN SVIVTGACPI VACPKDNYYE YVPNSPVPCT CASPLIVGWR
301: LKSPSFSYFD PYVHQFEQYM TRDLHLDLYQ MLIESNSWEE GPRLRMQLKL FPVVGVSTFN KSEVIRISDI LQYWEISVVD LFGPYELLSF TLEGPYSYLN
401: PDIQAKHKNK GAIIAIVVSG VFAAFVSAIL TVLIKKRHAK YQSLLSRKRL SAKLSIKLDG LRSFTFREMT LATNNFDHSN QVGEGGYGAV FKGILADKTV
501: VAIKRAKEGS VQGQKEFLTE ISLLSRVHHR NLVSLLGYCD EEGEQMLVYE FMCNGTLRNW LSANCKGTLS FATRLEIVLG AAKGILYLHT EAHPPIFHRD
601: IKASNILLDS KMAAKVADFG LSRLAPVQDD EGVLPNHVST IVKGTPGYLD PEYFLTRKLT DKSDVYSLGV VFLEILTGMR PISHGKNIVR EVNLAHGSEK
701: MFSVMDSTMG SYPSECVEKF VALALKCCED KPEDRPSMLD VVRELETIQS ILNLMPDIDT DSVDSKAKFN EPKTSSSFSD CTSKDAFLSS SNVSGAYSIS
801: GVSLTMPR

Best Arabidopsis Sequence Match ( AT5G01950.3 )
(BLAST)

001: MVFPQRLYLH ALLVACCCVL LLADAQRTHP SEVTALRSVK RSLLDPKDYL RNWNRGDPCR SNWTGVICFN EIGTDDYLHV RELLLMNMNL SGTLSPELQK
101: LAHLEILDFM WNNISGSIPN EIGQISSLVL LLLNGNKLSG TLPSELGYLS NLNRFQIDEN NITGPIPKSF SNLKKVKHLH FNNNSLTGQI PVELSNLTNI
201: FHVLLDNNKL SGNLPPQLSA LPNLQILQLD NNNFSGSDIP ASYGNFSNIL KLSLRNCSLK GALPDFSKIR HLKYLDLSWN ELTGPIPSSN FSKDVTTINL
301: SNNILNGSIP QSFSDLPLLQ MLLLKNNMLS GSVPDSLWKN ISFPKKARLL LDLRNNSLSR VQGDLTPPQN VTLRLDGNLI CTNGSISNAN LFCESKGKEW
401: ISLPNNSTNS ALDCPPLACP TPDFYEYSPA SPLRCFCAAP LRIGYRLKSP SFSYFPPYID QFGEYVTDFL QMEPYQLWID SYQWEKGPRL RMYLKLFPKV
501: NETYTRTFNE SEVLRIRGIF ASWRFPGSDL FGPYELLNFT LQGPYSYVNF NSERKGVSWR RLAAITAGAV VTAVAISAVV AALLLRRYSK HEREISRRRS
601: SSKASLLNSG IRGFSFKELA EATDDFSSST LVGRGGYGKV YRGVLSDNTV AAIKRADEGS LQGEKEFLNE IELLSRLHHR NLVSLIGYCD EESEQMLVYE
701: FMSNGTLRDW LSAKGKESLS FGMRIRVALG AAKGILYLHT EANPPVFHRD IKASNILLDP NFNAKVADFG LSRLAPVLED EEDVPKHVST VVRGTPGYLD
801: PEYFLTHKLT DKSDVYSIGV VFLELLTGMH AISHGKNIVR EVKTAEQRDM MVSLIDKRME PWSMESVEKF AALALRCSHD SPEMRPGMAE VVKELESLLQ
901: ASPDRETRVE LASSSSVLST SSSNVTRDLY ESSSLLGSDL SSGFVPSIAP R

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:TAIR;Acc:AT5G01950]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.