Factsheet for PGSC0003DMT400047023

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 8
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g102710.2.1	Tomato	plasma membrane	95.14	94.74
PGSC0003DMT400047024	Potato	plasma membrane	54.49	60.85
KRH51256	Soybean	plasma membrane	59.45	57.04
KRH36702	Soybean	plasma membrane	56.49	56.08
KRH11702	Soybean	plasma membrane	56.49	55.9
KRH36704	Soybean	plastid	51.64	54.58
KRH51255	Soybean	plasma membrane	52.59	53.55
PGSC0003DMT400021662	Potato	plasma membrane	53.43	52.49
Zm00001d004558_P001	Maize	cytosol, extracellular, plastid	5.7	47.79
PGSC0003DMT400049974	Potato	plastid	16.16	35.01
PGSC0003DMT400080229	Potato	plastid	18.69	34.17
PGSC0003DMT400071263	Potato	cytosol	28.72	33.66
PGSC0003DMT400016783	Potato	mitochondrion	25.03	32.83
VIT_12s0035g02090.t01	Wine grape	plasma membrane	61.99	32.04
PGSC0003DMT400071814	Potato	plasma membrane	16.26	29.73
PGSC0003DMT400047464	Potato	cytosol	14.15	24.14

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102592051	MapMan:18.4.1.8.1	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	UniProt:M1BK18	PFAM:PF07714
EnsemblPlantsGene:PGSC0003DMG400018263	PGSC:PGSC0003DMG400018263	EnsemblPlants:PGSC0003DMT400047023	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27003	PANTHER:PTHR27003:SF134	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF52058
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000295A468
RefSeq:XP_006358481.1	SEG:seg	:	:	:	:

Description

Serine/threonine-protein kinase PBS1 [Source:PGSC_GENE;Acc:PGSC0003DMG400018263]

Coordinates

chr1:+:79385216..79392204

Molecular Weight (calculated)

104900.0 Da

IEP (calculated)

6.219

GRAVY (calculated)

-0.169

Length

947 amino acids

Sequence
(BLAST)

001: MVQTRTIQLI IFCLLIISMQ VLVQLGASTN SGDYVVLEPL KEEWENIPPS WDGSDPCNDP WEGIDCNNSR VISIKLSSIN LKGELSGDIE GLSELQILDL
101: SYNKGLTGSL PQSIGNLKSL SILILVGCGF SGLIPNTIGS LSQLEYLSLN LNNFIGPIPA SVGNLSKLHW LDLADNKLSG PLPVSPGLDM LVHTKHFHLG
201: GNQFSGEIPD QLFSSNMTLK HLLLDQNQLT GKIPPSLGLV QTLEVVRLDR NSLDGSIPST LKNLALMSEL FLSNNKFTGP LPNLAGMNAL YYLDMSNNTF
301: SSADFPQWFS TLQSLTTLVM ENTQLQGEIP PTLFSLFQLQ TVNLRGNKIN GTLNIASNYS SQLKLIDLQN NSIDAYTVRP GFPFQIILMH NPVCYEERSE
401: DYCGISQTNF VYSTPQENCL KTQCSSDQIL SPTCKCAYPY TGDLFFRAPS FSDLTNTSIY ESLQKSMLSS FSPNQVPVDS VSLSNPKKNS EYYLVLHLQV
501: FPFGQDHFNR TGIATIGFAL SNQTYKPPPK FGPFFFSGES YKYFEVGSRG THKSITKGII IGAAAGGAVL LILSVIIGVL VCQKKRDQEA IRKSNPFATW
601: DSIKDSGGVP QLKGVKCFTF EELKKYTNNF SESNYIGSGG YGKVYKGTLP DGQLIAIKRA EQASKQGALE FKTEIEILSR FHHKNVVSLV GFCFRQGEQM
701: LVYEFIPNGS LKESLSGKSG IKLDWKRRLR IALGAARGLQ YLHDHVDPPI IHRDIKSNNI LLDERLTAKV ADFGLSKTMY EPDKGYVSTQ VKGTMGYMDP
801: EYYTTQQLTE KSDVYSFGVL LLELITARSP IVRGKYIVKE LRQAIDKSKD MYNIDEFVDP AIPSNMTPIS FRKFVDLAFT CLEDAGANRP TMAEVVKEIE
901: NIMEIDGLNS CAESRSTSVS HEGTSATFDH PYSEESLNRY NGVTNSR

Best Arabidopsis Sequence Match ( AT5G49760.1 )
(BLAST)

001: MSSRTGASLL LILFFFQICS VSALTNGLDA SALNALKSEW TTPPDGWEGS DPCGTNWVGI TCQNDRVVSI SLGNLDLEGK LPADISFLSE LRILDLSYNP
101: KLSGPLPPNI GNLGKLRNLI LVGCSFSGQI PESIGTLKEL IYLSLNLNKF SGTIPPSIGL LSKLYWFDIA DNQIEGELPV SNGTSAPGLD MLLQTKHFHF
201: GKNKLSGNIP KELFSSNMSL IHVLFDGNQF TGEIPETLSL VKTLTVLRLD RNKLIGDIPS YLNNLTNLNE LYLANNRFTG TLPNLTSLTS LYTLDVSNNT
301: LDFSPIPSWI SSLPSLSTLR MEGIQLNGPI PISFFSPPQL QTVILKRNSI VESLDFGTDV SSQLEFVDLQ YNEITDYKPS ANKVLQVILA NNPVCLEAGN
401: GPSYCSAIQH NTSFSTLPTN CSPCEPGMEA SPTCRCAYPF MGTLYFRSPS FSGLFNSTNF SILQKAIADF FKKFNYPVDS VGVRNIRENP TDHQLLIDLL
501: VFPLGRESFN QTGMSLVGFA FSNQTYKPPP IFGPYIFKAD LYKQFSDVEV SSKSSNKSIL IGAVVGVVVL LLLLTIAGIY ALRQKKRAER ATGQNNPFAK
601: WDTSKSSIDA PQLMGAKAFT FEELKKCTDN FSEANDVGGG GYGKVYRGIL PNGQLIAIKR AQQGSLQGGL EFKTEIELLS RVHHKNVVRL LGFCFDRNEQ
701: MLVYEYISNG SLKDSLSGKS GIRLDWTRRL KIALGSGKGL AYLHELADPP IIHRDIKSNN ILLDENLTAK VADFGLSKLV GDPEKTHVTT QVKGTMGYLD
801: PEYYMTNQLT EKSDVYGFGV VLLELLTGRS PIERGKYVVR EVKTKMNKSR SLYDLQELLD TTIIASSGNL KGFEKYVDLA LRCVEEEGVN RPSMGEVVKE
901: IENIMQLAGL NPNSDSATSS RTYEDAIKGS GDPYGSESFQ YSGNFPASKL EPQ

Arabidopsis Description

At5g49760 [Source:UniProtKB/TrEMBL;Acc:Q8GZ99]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.