Factsheet for Solyc10g054310.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g012170.2.1	Tomato	plastid	40.26	7.09
Solyc07g007780.2.1	Tomato	nucleus	38.96	5.79
Solyc10g074890.1.1	Tomato	cytosol, nucleus, plasma membrane	63.64	5.41
Solyc09g055570.2.1	Tomato	plasma membrane	64.94	5.38
Solyc10g074900.1.1	Tomato	cytosol, plasma membrane, plastid	62.34	5.29
Solyc09g055180.2.1	Tomato	cytosol, nucleus, plasma membrane	58.44	4.97
Solyc10g085670.1.1	Tomato	extracellular	59.74	4.77
Solyc01g102680.2.1	Tomato	plasma membrane	54.55	4.38
Solyc01g102710.2.1	Tomato	plasma membrane	53.25	4.31
Solyc01g102700.2.1	Tomato	plasma membrane	54.55	4.11
Solyc10g054300.1.1	Tomato	cytosol, nucleus, plastid	6.49	3.03
Solyc03g078470.2.1	Tomato	cytosol	6.49	2.59

Protein Annotations

Gene3D:1.10.510.10	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	UniProt:K4D129
InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFscan:PS50011	PANTHER:PTHR27003	PANTHER:PTHR27003:SF92	InterPro:Prot_kinase_dom
SUPFAM:SSF56112	EnsemblPlantsGene:Solyc10g054310.1	EnsemblPlants:Solyc10g054310.1.1	UniParc:UPI000276A9F6	:	:

Description

No Description!

Coordinates

chr10:+:55231043..55231883

Molecular Weight (calculated)

9072.1 Da

IEP (calculated)

6.953

GRAVY (calculated)

-0.127

Length

77 amino acids

Sequence
(BLAST)

1: MYLMVCQLYH VRHDTEKIPS LEVLVPGYLD PEYFFTHKLT EKSDVYSLGI VFLELLTGMR PISWKEHRPG GTRFFPP

Best Arabidopsis Sequence Match ( AT5G37450.4 )
(BLAST)

001: MDNNKLTGNL PPELAQMPSL RILQLDGSNF DGTEIPSSYG SIPNLVKLSL RNCNLEGPIP DLSKSLVLYY LDISSNKLTG EIPKNKFSAN ITTINLYNNL
101: LSGSIPSNFS GLPRLQRLQV QNNNLSGEIP VIWENRILKA EEKLILDLRN NMFSNVSSVL LNPPSNVTVK LYGNPVCANV NAGKLADLCG ISTLEVESPA
201: TSSETISTGD CKRQSCPVSE NYDYVIGSPV ACFCAAPLGI DLRLRSPSFS DFRPYKVSYM LDVASPKNLG INPYQISIDT FAWQSGPRLF MNMKIFPEYS
301: ELNSKFNSTE VQRIVDFFAT FTLNTDDSLG PYEIISINTG AYKDVTIIFP KKSGMSIGVS VGIIIGAIAF FLVLSSLALV FFIKRSKRKR KTREVDMEQE
401: HPLPKPPMNM ESVKGYNFTE LDSATSSFSD LSQIGRGGYG KVYKGHLPGG LVVAVKRAEQ GSLQGQKEFF TEIELLSRLH HRNLVSLLGY CDQKGEQMLV
501: YEYMPNGSLQ DALSARFRQP LSLALRLRIA LGSARGILYL HTEADPPIIH RDIKPSNILL DSKMNPKVAD FGISKLIALD GGGVQRDHVT TIVKGTPGYV
601: DPEYYLSHRL TEKSDVYSLG IVFLEILTGM RPISHGRNIV REVNEACDAG MMMSVIDRSM GQYSEECVKR FMELAIRCCQ DNPEARPWML EIVRELENIY
701: GLIPKEEKPY SSPSVQSSAS GMSGFAVASP RSSYTTFSEF TANQLVSGVI PSIAPR

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:TAIR;Acc:AT5G37450]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.