Factsheet for Solyc10g085670.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 10
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

extracellular: 26583031
extracellular: 29876421

msms PMID: 26583031 doi

F Gawehns, L Ma, O Bruning, PM Houterman, S Boeren, BJ Cornelissen, M Rep, FL Takken

Laboratory of Biochemistry, Wageningen University Wageningen, Netherlands., Molecular Plant Pathology, Faculty of Science, Swammerdam Institute for Life Sciences, University of Amsterdam Amsterdam, Netherlands., RNA Biology and Applied Bioinformatics Research Group and MAD: Dutch Genomics Service and Support Provider, Faculty of Science, Swammerdam Institute for Life Sciences, University of Amsterdam Amsterdam, Netherlands.

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400021662	Potato	plasma membrane	98.24	98.24
KRH07655	Soybean	plasma membrane	76.76	76.53
KRH45351	Soybean	plasma membrane	76.04	75.64
VIT_08s0056g00100.t01	Wine grape	plasma membrane	75.1	75.34
AT1G79620.5	Thale cress	plasma membrane	73.03	70.61
GSMUA_Achr9P16880_001	Banana	plasma membrane	62.55	65.05
GSMUA_Achr3P09580_001	Banana	plasma membrane	63.28	63.54
TraesCS4A01G131500.1	Wheat	plasma membrane	62.24	62.11
TraesCS4D01G175200.2	Wheat	plasma membrane	62.14	61.94
HORVU4Hr1G051120.9	Barley	plasma membrane	61.93	61.74
TraesCS4B01G173100.1	Wheat	plasma membrane	61.93	61.42
KXG39452	Sorghum	plasma membrane	62.55	61.41
Os03t0329700-01	Rice	plasma membrane	61.83	61.13
Solyc10g054310.1.1	Tomato	cytosol	4.77	59.74
Zm00001d029012_P002	Maize	plastid	61.51	56.21
GSMUA_Achr3P09570_001	Banana	plasma membrane	52.07	54.15
Solyc01g102710.2.1	Tomato	plasma membrane	52.8	53.52
GSMUA_Achr9P16900_001	Banana	plasma membrane	50.83	52.41
Os05t0305900-01	Rice	plasma membrane	50.73	51.86
OQU77613	Sorghum	plasma membrane	50.52	51.7
Solyc01g102700.2.1	Tomato	plasma membrane	54.67	51.57
Zm00001d010448_P003	Maize	plasma membrane	50.62	50.99
Solyc01g102680.2.1	Tomato	plasma membrane	49.79	50.0
CDY49740	Canola	cytosol	72.1	49.79
TraesCS2A01G431100.2	Wheat	plasma membrane	49.59	49.38
TraesCS2D01G428900.1	Wheat	plasma membrane	49.38	49.17
TraesCS2B01G452400.2	Wheat	plasma membrane	49.38	49.12
GSMUA_Achr10P...	Banana	plasma membrane	47.1	49.03
Bra008427.1-P	Field mustard	cytosol	73.96	48.67
Solyc10g054300.1.1	Tomato	cytosol, nucleus, plastid	7.99	46.67
HORVU2Hr1G100620.3	Barley	cytosol	32.26	45.87
CDY22287	Canola	cytosol	73.55	41.24
Solyc09g055180.2.1	Tomato	cytosol, nucleus, plasma membrane	33.09	35.21
Solyc10g074890.1.1	Tomato	cytosol, nucleus, plasma membrane	32.88	35.03
Solyc10g074900.1.1	Tomato	cytosol, plasma membrane, plastid	32.88	34.91
Solyc09g055570.2.1	Tomato	plasma membrane	33.2	34.41
Solyc10g012170.2.1	Tomato	plastid	14.73	32.49
Solyc07g007780.2.1	Tomato	nucleus	15.98	29.73
Solyc03g078470.2.1	Tomato	cytosol	5.5	27.46

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.8.1	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:IPR032675	UniProt:K4D401	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	PFAM:PF07714
PFAM:PF08263	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27003	PANTHER:PTHR27003:SF244
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc10g085670.1	EnsemblPlants:Solyc10g085670.1.1	TMHMM:TMhelix	UniParc:UPI000276AA32
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr10:-:64774341..64779799

Molecular Weight (calculated)

106366.0 Da

IEP (calculated)

6.693

GRAVY (calculated)

-0.202

Length

964 amino acids

Sequence
(BLAST)

001: MAATRLLLCF IVFSSGIDFI YTVTDPRDVT ILRSLKDQWE NTPPSWQKSD DPCGTSWEGV TCNNSRVTAL GLSTMGLRGK LSGDIGGLTE LISLDLSFNR
101: GLTGSLSPRI GDLQKLNILI LAGCSFSGSI PRELGRLSEL SFLALNSNNF TGEIPRTLGN LSKLYWLDLA DNQLTGPIPV STFSSPGLDL LKKAKHFHFN
201: KNQLSGSIPD ILFSSDMVLI HVLFDGNQLS GSIPFTLGLV QTLEVLRLDR NALNGSVPSN LNNLTSIVEL NLAHNKLSGL LPDLTGMNSL NYLDLSNNSF
301: HKSEAPIWFS TLESLTTLVI EYGSLHGSVP QKLFALPQLQ QVKLRNNALN DTLNMGGISG RQLTLVDLQN NEISSITLGS GYKNTLILIG NPVCDTALGN
401: TNYCQLQQQS AKPYSTSLAN CGRKSCPADQ KVSPQSCDCA YPYEGTFYFR GPSFRELSND NTFHSLEMSL WVKLDLTPGS VSLQNPFFNI DDYLQVQLEL
501: FPPTGKYFNR SEVERIGFSL SNQTYKPPHE FGPYYFIASP YTFQAERGET SISSRQVIGI ATGCTILVLL LVALAIYAIQ QKKLAERAIG LSRPFASWAP
601: SGNDSEGAPQ LKGARWFSYD ELKKYTGNFS ERNEIGSGGY GKVYRGMLAN GQVIAIKRAQ HGSMQGGQEF KTEIELLSRV HHKNLVGLVG FCFEQGEQVL
701: VYEYMPNGSL RENLSGKTSI YLDWKRRLRV ALGSARGLAY LHELANPPII HRDVKSTNIL LDQNLTAKVG DFGLSKLVSD SSKGHVSTQV KGTLGYLDPE
801: YYMTQQLTEK SDVYSFGVVM LELITAKQPI EKGKYVVREM RTAIHKNDEE HYGLTNMIDP VIRNMPNLIG FTRFVDVAMQ CVEEAAADRP TMSEVVKMLE
901: SILQNDGLET NSTSASSSIT DFGTAIAASR HPYNKEALQR KEMNDTHAFD YSGGYTLPTN VEPK

Best Arabidopsis Sequence Match ( AT1G79620.1 )
(BLAST)

001: MVGSNTVTAT SRLLLICFAY SFTVFSMISS VTDPRDAAAL RSLMDQWDNT PPSWGGSDDP CGTPWEGVSC NNSRITALGL STMGLKGRLS GDIGELAELR
101: SLDLSFNRGL TGSLTSRLGD LQKLNILILA GCGFTGTIPN ELGYLKDLSF LALNSNNFTG KIPASLGNLT KVYWLDLADN QLTGPIPISS GSSPGLDLLL
201: KAKHFHFNKN QLSGTIPPKL FSSEMILIHV LFDGNRFTGS IPSTLGLIQT LEVLRLDRNT LTGKVPENLS NLTNIIELNL AHNKLVGSLP DLSDMKSMNY
301: VDLSNNSFDP SESPLWFSTL PSLTTLVMEY GSLQGPLPNK LFGFPQLQQV RLKKNAFNGT LSLGDTVGPE LQLVDLQDND ISSVTLSSGY TNTLILEGNP
401: VCTTALSNTN YCQIQQQQVK RIYSTSLANC GGKSCPLDQK VSPQSCECAY PYEGTLYFRG PMFRDLSNVN TYHSLEMSLW VKLGLTPGSV SLQNPFFNND
501: DYLQIQLALF PPMGKYFNRT EVQRIGFDLS NQTYKPPPLF GPYYFIASPY TFPADGNGHS LSSRMVTGII TGCSALVLCL VALGIYAMWQ KRRAEQAIGL
601: SRPFVSWASS GKDSGGAPQL KGARWFSYEE LKKITNNFSV SSELGYGGYG KVYKGMLQDG HMVAIKRAQQ GSTQGGLEFK TEIELLSRVH HKNLVGLVGF
701: CFEQGEQILV YEYMSNGSLK DSLTGRSGIT LDWKRRLRVA LGSARGLAYL HELADPPIIH RDVKSTNILL DENLTAKVAD FGLSKLVSDC TKGHVSTQVK
801: GTLGYLDPEY YTTQKLTEKS DVYSFGVVMM ELITAKQPIE KGKYIVREIK LVMNKSDDDF YGLRDKMDRS LRDVGTLPEL GRYMELALKC VDETADERPT
901: MSEVVKEIEI IIQNSGASSS SSASASSSAT DFGEKLLYGG TLKKKEARDG DGGGAFDYSG GYSVPTKIEP K

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:TAIR;Acc:AT1G79620]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.