Factsheet for Zm00001d029012_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG39452	Sorghum	plasma membrane	87.77	94.3
TraesCS4D01G175200.2	Wheat	plasma membrane	79.05	86.25
Os03t0329700-01	Rice	plasma membrane	79.53	86.05
TraesCS4A01G131500.1	Wheat	plasma membrane	78.58	85.82
TraesCS4B01G173100.1	Wheat	plasma membrane	78.48	85.19
HORVU4Hr1G051120.9	Barley	plasma membrane	78.01	85.11
GSMUA_Achr9P16880_001	Banana	plasma membrane	58.2	66.24
GSMUA_Achr3P09580_001	Banana	plasma membrane	59.81	65.73
KRH07655	Soybean	plasma membrane	58.2	63.5
VIT_08s0056g00100.t01	Wine grape	plasma membrane	57.35	62.96
KRH45351	Soybean	plasma membrane	57.44	62.54
PGSC0003DMT400021662	Potato	plasma membrane	56.4	61.72
Solyc10g085670.1.1	Tomato	extracellular	56.21	61.51
AT1G79620.5	Thale cress	plasma membrane	56.49	59.78
Zm00001d004558_P001	Maize	cytosol, extracellular, plastid	6.35	59.29
Zm00001d038522_P002	Maize	plasma membrane	50.9	55.13
Zm00001d010448_P003	Maize	plasma membrane	44.55	49.11
Zm00001d041773_P002	Maize	extracellular	44.17	47.45
CDY49740	Canola	cytosol	57.54	43.48
Bra008427.1-P	Field mustard	cytosol	59.05	42.53
CDY22287	Canola	cytosol	58.67	36.01
Zm00001d025799_P004	Maize	endoplasmic reticulum, plasma membrane	12.7	34.99
Zm00001d003110_P002	Maize	cytosol, plastid	11.66	34.75
Zm00001d027676_P001	Maize	cytosol, plastid	11.75	34.44
Zm00001d038494_P015	Maize	plasma membrane	30.52	34.15
Zm00001d038503_P007	Maize	plasma membrane	30.33	33.93
Zm00001d043075_P002	Maize	plasma membrane	30.14	31.99
Zm00001d043091_P002	Maize	plasma membrane	40.85	28.56
Zm00001d004559_P021	Maize	plasma membrane	29.76	28.26
Zm00001d020118_P001	Maize	plasma membrane, plastid	11.0	27.88
Zm00001d051887_P001	Maize	plastid	12.89	27.04
Zm00001d030173_P007	Maize	plasma membrane	13.74	25.62
Zm00001d012929_P002	Maize	plastid	9.48	22.88

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.8.1	Gene3D:3.30.200.20	Gene3D:3.80.10.10	UniProt:A0A1D6K1R2	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	ProteinID:ONL97652.1
PFAM:PF07714	PFAM:PF08263	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27003
PANTHER:PTHR27003:SF254	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF52058	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI0008439FD4	EnsemblPlantsGene:Zm00001d029012	EnsemblPlants:Zm00001d029012_P002
EnsemblPlants:Zm00001d029012_T002	SEG:seg	:	:	:	:

Description

Leucine-rich repeat protein kinase family protein

Coordinates

chr1:+:54928187..54933748

Molecular Weight (calculated)

114695.0 Da

IEP (calculated)

6.768

GRAVY (calculated)

-0.162

Length

1055 amino acids

Sequence
(BLAST)

0001: MRRIMEFGCG AGGCCSAAPP TSFLLSGSVR WAGRPKTAPR GRDLGMQGSA RTEQPAAGCS RRTTMGFLLA VAVLLSACAQ QCSGTTDSQD TSVLRALMDQ
0101: WQNAPPSWGQ SDDPCGESPW EGVTCGGDKV ISIKLSTMGI QGSLAADIGQ LSDLQSMDLS FNNELGGVLT PTIGNLKQLT TLILSGCSFH GTIPDELGSL
0201: PKLSYMALNS NQFSGKIPAS LGNLSSLYWF DIADNQLSGP LPVSTDGGMG LDKLIKTRHF HFNKNQLSGP IPDALFSPEM ALIHLLFDGN RFTGNIPDSL
0301: GFVSTLEVVR LDRNSLSGQV PLNLNNLTKV IELNLANNQL TGTLPDLTRM DLLNYVDLSN NTFDPSPCPA WFWRLPQLSA LIIQSGRLYG TVPTRLFSSP
0401: QLNQVILDGN AFNGTLDMGR SISSELSLVS FKDNEFASLT VTSSYNGTLA LAGNPVCERL PNTPYCSATQ RPLSAPYSTS LVKCYSGSCP AGQSLSPQSC
0501: LCAYPYQGVM YFRAPFFHDV ANDTAFQELE SMLWTKLALT PGSVYLQDPF FNSDAYMQVQ VKLFPAGSGA YFNRSEVMRI GFDLSNQTFK PPKEFGPYYF
0601: IASPYPFPGS EQSSKSKGVI VGIAVGCGVL FVALAGAAAY AFIQRRRAEK AKEELGGPFG TFCVMPCSSD STVRRLTTLY VSTAAASWAR SEERGGAPRL
0701: KGARWFSYEE LKRSTNNFAE ANELGYGGYG KVYRGMLPTG QFIAIKRAQQ GSMQGGHEFK TEIELLSRVH HKNLVGLLGF CFEQGEQMLV YEFMSGGTLR
0801: DSLAGKSGLH LDWKKRLRVA LGAARGLAYL HELADPPIIH RDVKSSNILM DEHLTAKVAD FGLSKLVSDS ERGHVSTQVK GTLGYLDPEY YMSQQLTEKS
0901: DVYSFGVVML ELIVAKQPIE KGKYIVREAK RVFDADDAEF CGLKDMVDAR IMSTNNHLAA FGKFVQLALR CVDEVATARP SMSEVVKEIE MMLQSEGLSS
1001: ASTSASTSAT EFDVTKGAPR HPYNDPPLPK KDKDVSTDSF EYSGGYSFQS KVEPK

Best Arabidopsis Sequence Match ( AT1G79620.1 )
(BLAST)

001: MVGSNTVTAT SRLLLICFAY SFTVFSMISS VTDPRDAAAL RSLMDQWDNT PPSWGGSDDP CGTPWEGVSC NNSRITALGL STMGLKGRLS GDIGELAELR
101: SLDLSFNRGL TGSLTSRLGD LQKLNILILA GCGFTGTIPN ELGYLKDLSF LALNSNNFTG KIPASLGNLT KVYWLDLADN QLTGPIPISS GSSPGLDLLL
201: KAKHFHFNKN QLSGTIPPKL FSSEMILIHV LFDGNRFTGS IPSTLGLIQT LEVLRLDRNT LTGKVPENLS NLTNIIELNL AHNKLVGSLP DLSDMKSMNY
301: VDLSNNSFDP SESPLWFSTL PSLTTLVMEY GSLQGPLPNK LFGFPQLQQV RLKKNAFNGT LSLGDTVGPE LQLVDLQDND ISSVTLSSGY TNTLILEGNP
401: VCTTALSNTN YCQIQQQQVK RIYSTSLANC GGKSCPLDQK VSPQSCECAY PYEGTLYFRG PMFRDLSNVN TYHSLEMSLW VKLGLTPGSV SLQNPFFNND
501: DYLQIQLALF PPMGKYFNRT EVQRIGFDLS NQTYKPPPLF GPYYFIASPY TFPADGNGHS LSSRMVTGII TGCSALVLCL VALGIYAMWQ KRRAEQAIGL
601: SRPFVSWASS GKDSGGAPQL KGARWFSYEE LKKITNNFSV SSELGYGGYG KVYKGMLQDG HMVAIKRAQQ GSTQGGLEFK TEIELLSRVH HKNLVGLVGF
701: CFEQGEQILV YEYMSNGSLK DSLTGRSGIT LDWKRRLRVA LGSARGLAYL HELADPPIIH RDVKSTNILL DENLTAKVAD FGLSKLVSDC TKGHVSTQVK
801: GTLGYLDPEY YTTQKLTEKS DVYSFGVVMM ELITAKQPIE KGKYIVREIK LVMNKSDDDF YGLRDKMDRS LRDVGTLPEL GRYMELALKC VDETADERPT
901: MSEVVKEIEI IIQNSGASSS SSASASSSAT DFGEKLLYGG TLKKKEARDG DGGGAFDYSG GYSVPTKIEP K

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:TAIR;Acc:AT1G79620]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.