Factsheet for VIT_08s0056g00100.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 9
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH07655	Soybean	plasma membrane	76.59	76.11
KRH45351	Soybean	plasma membrane	75.96	75.34
Solyc10g085670.1.1	Tomato	extracellular	75.34	75.1
PGSC0003DMT400021662	Potato	plasma membrane	75.34	75.1
GSMUA_Achr9P16880_001	Banana	plasma membrane	66.08	68.5
AT1G79620.5	Thale cress	plasma membrane	70.34	67.8
GSMUA_Achr3P09580_001	Banana	plasma membrane	66.81	66.88
TraesCS4D01G175200.2	Wheat	plasma membrane	63.79	63.39
TraesCS4A01G131500.1	Wheat	plasma membrane	63.58	63.25
HORVU4Hr1G051120.9	Barley	plasma membrane	63.16	62.77
TraesCS4B01G173100.1	Wheat	plasma membrane	63.48	62.76
KXG39452	Sorghum	plasma membrane	64.0	62.63
Os03t0329700-01	Rice	plasma membrane	63.37	62.46
Zm00001d029012_P002	Maize	plastid	62.96	57.35
GSMUA_Achr3P09570_001	Banana	plasma membrane	52.34	54.26
OQU77613	Sorghum	plasma membrane	51.93	52.97
GSMUA_Achr9P16900_001	Banana	plasma membrane	51.09	52.51
Os05t0305900-01	Rice	plasma membrane	51.09	52.07
Zm00001d010448_P003	Maize	plasma membrane	51.82	52.04
TraesCS2A01G431100.2	Wheat	plasma membrane	50.88	50.52
TraesCS2D01G428900.1	Wheat	plasma membrane	50.68	50.31
TraesCS2B01G452400.2	Wheat	plasma membrane	50.47	50.05
GSMUA_Achr10P...	Banana	plasma membrane	47.45	49.24
CDY49740	Canola	cytosol	69.51	47.85
Bra008427.1-P	Field mustard	cytosol	71.18	46.69
HORVU2Hr1G100620.3	Barley	cytosol	32.57	46.17
CDY22287	Canola	cytosol	70.66	39.5
VIT_19s0014g05320.t01	Wine grape	cytosol	8.74	37.0
VIT_06s0004g06030.t01	Wine grape	cytosol	16.34	35.76
VIT_06s0004g08250.t01	Wine grape	plasma membrane	34.65	34.72
VIT_11s0118g00210.t01	Wine grape	plasma membrane	16.55	31.24
VIT_12s0035g02090.t01	Wine grape	plasma membrane	55.67	29.2
VIT_08s0056g00570.t01	Wine grape	plasma membrane	34.44	19.3
VIT_15s0046g01830.t01	Wine grape	mitochondrion, plastid	17.17	14.78

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100257037	wikigene:100257037	MapMan:18.4.1.8.1	Gene3D:3.30.200.20	Gene3D:3.80.10.10
ProteinID:CAQ58615	ProteinID:CAQ58615.1	ProteinID:CCB55930	ProteinID:CCB55930.1	EMBL:CU914150	UniProt:F6HMQ5
EMBL:FN595995	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100257037
wikigene:LOC100257037	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	PFAM:PF07714	PFAM:PF08263	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27003	PANTHER:PTHR27003:SF244	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF52047	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
SignalP:SignalP-noTM	TIGR:TC53507	TMHMM:TMhelix	UniParc:UPI00015CC41C	ArrayExpress:VIT_08s0056g00100	EnsemblPlantsGene:VIT_08s0056g00100
EnsemblPlants:VIT_08s0056g00100.t01	unigene:Vvi.11676	RefSeq:XP_002264658	RefSeq:XP_002264658.2	RefSeq:XP_010653092.1	SEG:seg

Description

No Description!

Coordinates

chr8:-:221790..228372

Molecular Weight (calculated)

105362.0 Da

IEP (calculated)

6.060

GRAVY (calculated)

-0.186

Length

961 amino acids

Sequence
(BLAST)

001: MAAVKLFFLL VFSGGMHGIL CFTNSDDAGV LQSLKGQWEN TPPSWEKSDP CGVPWEGITC NNSRVIALGL STMGLKGKLE GDIGGLTELR SLDLSFNLGL
101: TGSLTPKLGN LENLNILILA GCGFTGQIPD ELGNLAQLTF LALNSNNLTG QIPPSLGRLS NLYWLDLAEN KLSGPFPTST LTSPGLDQLL KAKHFHFNKN
201: QLSGPIPRKL FSSDMELIHV LFDGNQLSGS IPDTLGLVQT LEVLRLDRNS LSGTVPSNLN NLTIVNELNL AHNQLIGPIP NLTGMDHLNY VDLSNNTFDP
301: SEAPAWFSTL PSLTTLILEH GSLYGSVPQK VFSFPGIEQV KLKNNAFNDT FSMGDSIGDQ LQLVDLQNNQ IPSVTLSSGY TDALILVGNP VCKVTLLNTA
401: YCQIQDQTPK TYSTNLANCG SELCSPDQKL NPQSCECAYA YEGTLYFRGP TFRDLSDLNK FHSLESSLWT KLNLTPGSVF LQNPFFNIDD YLQIQLALFP
501: PTGKYFNRSE VQRIGFSLSN QTYKPPEEFG PYYFIASPYH FQGHGGTSFS LGVIIGIAIG CTILVVGLVA LGIYAVRQKK RAERAIELSK PFASWAPSGK
601: DSGAAPQLKG ARWFSYDELK KCTNNFSESN EIGSGGYGKV YRGMLSGGQI VAIKRAQQGS MQGGLEFKTE IELLSRVHHK NLVGLVGFCF EQGEQMLVYE
701: FMPNGTLRES LSGRSGIHLD WKRRLRIALG SARGLAYLHE LANPPIIHRD IKSTNILLDE NLTAKVADFG LSKLVSDSAK GHVSTQVKGT LGYLDPEYYM
801: TQQLTEKSDV YSYGVVMLEL VSARQPIEKG KYIVREVRMA MDKNDEEHYG LREIMDPAIR NVTNLIGFRK FLELAMQCVE ESAGDRPTMS DVVKTIETVL
901: QNDGMNTNST TSASSSATEF GASKGVPRHP YNDSLPRKEV NDSDAFDYSG GYTLSTKVEP K

Best Arabidopsis Sequence Match ( AT1G79620.1 )
(BLAST)

001: MVGSNTVTAT SRLLLICFAY SFTVFSMISS VTDPRDAAAL RSLMDQWDNT PPSWGGSDDP CGTPWEGVSC NNSRITALGL STMGLKGRLS GDIGELAELR
101: SLDLSFNRGL TGSLTSRLGD LQKLNILILA GCGFTGTIPN ELGYLKDLSF LALNSNNFTG KIPASLGNLT KVYWLDLADN QLTGPIPISS GSSPGLDLLL
201: KAKHFHFNKN QLSGTIPPKL FSSEMILIHV LFDGNRFTGS IPSTLGLIQT LEVLRLDRNT LTGKVPENLS NLTNIIELNL AHNKLVGSLP DLSDMKSMNY
301: VDLSNNSFDP SESPLWFSTL PSLTTLVMEY GSLQGPLPNK LFGFPQLQQV RLKKNAFNGT LSLGDTVGPE LQLVDLQDND ISSVTLSSGY TNTLILEGNP
401: VCTTALSNTN YCQIQQQQVK RIYSTSLANC GGKSCPLDQK VSPQSCECAY PYEGTLYFRG PMFRDLSNVN TYHSLEMSLW VKLGLTPGSV SLQNPFFNND
501: DYLQIQLALF PPMGKYFNRT EVQRIGFDLS NQTYKPPPLF GPYYFIASPY TFPADGNGHS LSSRMVTGII TGCSALVLCL VALGIYAMWQ KRRAEQAIGL
601: SRPFVSWASS GKDSGGAPQL KGARWFSYEE LKKITNNFSV SSELGYGGYG KVYKGMLQDG HMVAIKRAQQ GSTQGGLEFK TEIELLSRVH HKNLVGLVGF
701: CFEQGEQILV YEYMSNGSLK DSLTGRSGIT LDWKRRLRVA LGSARGLAYL HELADPPIIH RDVKSTNILL DENLTAKVAD FGLSKLVSDC TKGHVSTQVK
801: GTLGYLDPEY YTTQKLTEKS DVYSFGVVMM ELITAKQPIE KGKYIVREIK LVMNKSDDDF YGLRDKMDRS LRDVGTLPEL GRYMELALKC VDETADERPT
901: MSEVVKEIEI IIQNSGASSS SSASASSSAT DFGEKLLYGG TLKKKEARDG DGGGAFDYSG GYSVPTKIEP K

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:TAIR;Acc:AT1G79620]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.