Factsheet for GSMUA_Achr9P16880_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 6
plastid 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plasma membrane
iPSORT:	plastid
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P09580_001	Banana	plasma membrane	81.66	78.85
VIT_08s0056g00100.t01	Wine grape	plasma membrane	68.5	66.08
GSMUA_AchrUn_...	Banana	plasma membrane	63.75	65.81
TraesCS4A01G131500.1	Wheat	plasma membrane	67.1	64.39
TraesCS4D01G175200.2	Wheat	plasma membrane	67.1	64.32
KRH07655	Soybean	plasma membrane	66.99	64.22
HORVU4Hr1G051120.9	Barley	plasma membrane	66.88	64.12
Os03t0329700-01	Rice	plasma membrane	67.21	63.9
TraesCS4B01G173100.1	Wheat	plasma membrane	66.88	63.79
KRH45351	Soybean	plasma membrane	66.24	63.36
KXG39452	Sorghum	plasma membrane	66.56	62.83
Solyc10g085670.1.1	Tomato	extracellular	65.05	62.55
PGSC0003DMT400021662	Potato	plasma membrane	64.51	62.03
GSMUA_AchrUn_...	Banana	plasma membrane	64.83	60.34
AT1G79620.5	Thale cress	plasma membrane	63.65	59.18
Zm00001d029012_P002	Maize	plastid	66.24	58.2
GSMUA_Achr3P09570_001	Banana	plasma membrane	53.4	53.4
GSMUA_Achr9P16900_001	Banana	plasma membrane	52.1	51.66
GSMUA_Achr6P06960_001	Banana	mitochondrion	38.94	49.86
GSMUA_Achr9P02530_001	Banana	plasma membrane	50.92	49.74
GSMUA_Achr10P...	Banana	plasma membrane	49.51	49.57
GSMUA_Achr6P28800_001	Banana	plasma membrane	48.76	47.03
CDY49740	Canola	cytosol	63.0	41.83
Bra008427.1-P	Field mustard	cytosol	64.83	41.02
GSMUA_Achr2P04060_001	Banana	cytosol	13.27	38.8
GSMUA_Achr9P20380_001	Banana	cytosol	13.38	37.01
CDY22287	Canola	cytosol	64.19	34.61
GSMUA_Achr4P00140_001	Banana	plasma membrane	34.41	34.15
GSMUA_Achr6P32410_001	Banana	plasma membrane	34.09	33.51
GSMUA_Achr1P17280_001	Banana	cytosol	14.78	32.78
GSMUA_Achr5P10620_001	Banana	plastid	14.67	31.55
GSMUA_Achr1P03260_001	Banana	plastid	14.56	28.78
GSMUA_Achr2P05210_001	Banana	plasma membrane	15.86	26.92
GSMUA_Achr7P17040_001	Banana	plasma membrane	15.53	26.87
GSMUA_Achr7P20840_001	Banana	mitochondrion	15.86	25.7

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.8.1	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr9G16880_001
EnsemblPlants:GSMUA_Achr9P16880_001	EnsemblPlants:GSMUA_Achr9T16880_001	InterPro:IPR000719	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf
UniProt:M0U0Z5	PFAM:PF07714	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27003
PANTHER:PTHR27003:SF244	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF52058	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002950B54	SEG:seg

Description

Probable leucine-rich repeat receptor-like protein kinase At5g49770 [Source:GMGC_GENE;Acc:GSMUA_Achr9G16880_001]

Coordinates

chr9:-:11476686..11482178

Molecular Weight (calculated)

101317.0 Da

IEP (calculated)

6.312

GRAVY (calculated)

-0.115

Length

927 amino acids

Sequence
(BLAST)

001: MGTLIFTLSV FLVSLGSSSG STNPQDAAAL RSLMSQWQNT PPNWGKSDDP CGTPWEGIGC SNSRVTVLRL STMGIKGTLS GDIGQLGELK TLDLSYNSEL
101: GGPLPPNIAN LRKITTLILA GCSFSGNIPD ELGSLVNLSY LALNSNQFTG SIPASLGKLS NLYWFDVADN QLSGSLPIST KTSPGLDQLV HTKHFHFNKN
201: QLSGSIPEYL FSSDMTLLHV LFDGNKFTGE IPASIGLVQT LEVLRLDRND LGGTVPSNIN NLTRINELNL ANNKLTGPMP NLTGIDNLNY VDLSNNTFDP
301: SESPAWFSEL QSLTALVIES GGLYGEVPQK LFGFPQLQQV ILDDNEFNGT LDMGDSISQQ LQIVNFKNNH LTGVKLTANY NKTLILVGNP VCNSLSNTNF
401: CSLQQKPAVP YSTSLANCVA NLCPQDQSLS PQSCSCAYPF EGVMFFRAPR FRDVTNNTLF QSLESSLWTK LGLPPGSVFL QNPFINSDSY LQVQVKLFPP
501: SGMYFNRSEI LQIGFDLSNQ TYKPPPIFGP YYFIASPYPF PGDLSILLKS ALSIGLIIGI AVGCALLIIG LLLVVIYALR QRKHAQRAIQ LSRPFGKCSL
601: FQFGDAPQLK GARWFSYDEL KQCTNNFAVS NEIGSGGYGK VYRGMLPGGQ AVAIKRAQQG SMQGGLEFKT EIELLSRVHH KNLVGLVGFC FDQGEQMLVY
701: EFVPNGTLRE SLSGKNGVLL DWRRRLRIAL GSARGLAYLH ELADPPIIHR DVKSSNILLD ENLNAKVADF GLSKLASDNE KGHVSTQVKG TLGYLDPEYY
801: MTQQLTDKSD VYSFGELYGL KELMDPVIQN SIHLIAFKKF TELALRCLEE SAGDRPTMSD IVKEIEMMLH ADDLSTNSHS ASSSATDFGT AKGVPHHPYI
901: SLSRKDVNSN AFEYSGGYSF SAKPEPK

Best Arabidopsis Sequence Match ( AT1G79620.1 )
(BLAST)

001: MVGSNTVTAT SRLLLICFAY SFTVFSMISS VTDPRDAAAL RSLMDQWDNT PPSWGGSDDP CGTPWEGVSC NNSRITALGL STMGLKGRLS GDIGELAELR
101: SLDLSFNRGL TGSLTSRLGD LQKLNILILA GCGFTGTIPN ELGYLKDLSF LALNSNNFTG KIPASLGNLT KVYWLDLADN QLTGPIPISS GSSPGLDLLL
201: KAKHFHFNKN QLSGTIPPKL FSSEMILIHV LFDGNRFTGS IPSTLGLIQT LEVLRLDRNT LTGKVPENLS NLTNIIELNL AHNKLVGSLP DLSDMKSMNY
301: VDLSNNSFDP SESPLWFSTL PSLTTLVMEY GSLQGPLPNK LFGFPQLQQV RLKKNAFNGT LSLGDTVGPE LQLVDLQDND ISSVTLSSGY TNTLILEGNP
401: VCTTALSNTN YCQIQQQQVK RIYSTSLANC GGKSCPLDQK VSPQSCECAY PYEGTLYFRG PMFRDLSNVN TYHSLEMSLW VKLGLTPGSV SLQNPFFNND
501: DYLQIQLALF PPMGKYFNRT EVQRIGFDLS NQTYKPPPLF GPYYFIASPY TFPADGNGHS LSSRMVTGII TGCSALVLCL VALGIYAMWQ KRRAEQAIGL
601: SRPFVSWASS GKDSGGAPQL KGARWFSYEE LKKITNNFSV SSELGYGGYG KVYKGMLQDG HMVAIKRAQQ GSTQGGLEFK TEIELLSRVH HKNLVGLVGF
701: CFEQGEQILV YEYMSNGSLK DSLTGRSGIT LDWKRRLRVA LGSARGLAYL HELADPPIIH RDVKSTNILL DENLTAKVAD FGLSKLVSDC TKGHVSTQVK
801: GTLGYLDPEY YTTQKLTEKS DVYSFGVVMM ELITAKQPIE KGKYIVREIK LVMNKSDDDF YGLRDKMDRS LRDVGTLPEL GRYMELALKC VDETADERPT
901: MSEVVKEIEI IIQNSGASSS SSASASSSAT DFGEKLLYGG TLKKKEARDG DGGGAFDYSG GYSVPTKIEP K

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:TAIR;Acc:AT1G79620]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.