Factsheet for GSMUA_Achr9P20380_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plasma membrane 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P04060_001	Banana	cytosol	80.9	85.49
GSMUA_Achr5P10620_001	Banana	plastid	63.58	49.42
GSMUA_Achr1P17280_001	Banana	cytosol	55.52	44.5
GSMUA_Achr1P03260_001	Banana	plastid	61.79	44.14
EES07775	Sorghum	plastid	58.81	42.37
HORVU6Hr1G091790.4	Barley	peroxisome, plastid	57.91	42.36
Os02t0821400-01	Rice	cytosol, mitochondrion, nucleus, plastid	59.4	42.16
TraesCS6D01G383700.1	Wheat	plastid	57.61	41.59
TraesCS6A01G399500.1	Wheat	peroxisome, plastid	57.91	41.54
Zm00001d051887_P001	Maize	plastid	58.81	39.16
TraesCS6B01G439700.1	Wheat	plastid	57.91	38.11
GSMUA_Achr7P17040_001	Banana	plasma membrane	51.34	32.09
GSMUA_Achr2P05210_001	Banana	plasma membrane	50.45	30.95
GSMUA_Achr7P20840_001	Banana	mitochondrion	51.04	29.9
GSMUA_Achr6P06960_001	Banana	mitochondrion	39.4	18.23
GSMUA_Achr4P00140_001	Banana	plasma membrane	39.4	14.13
GSMUA_Achr6P32410_001	Banana	plasma membrane	39.4	14.0
GSMUA_Achr3P09580_001	Banana	plasma membrane	39.7	13.85
GSMUA_Achr6P28800_001	Banana	plasma membrane	38.51	13.42
GSMUA_Achr9P16880_001	Banana	plasma membrane	37.01	13.38
GSMUA_Achr3P09570_001	Banana	plasma membrane	36.72	13.27
GSMUA_AchrUn_...	Banana	plasma membrane	39.1	13.15
GSMUA_Achr9P16900_001	Banana	plasma membrane	36.12	12.94
GSMUA_AchrUn_...	Banana	plasma membrane	33.73	12.58
GSMUA_Achr9P02530_001	Banana	plasma membrane	33.43	11.8
GSMUA_Achr10P...	Banana	plasma membrane	31.04	11.23

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.34	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr9G20380_001	EnsemblPlants:GSMUA_Achr9P20380_001	EnsemblPlants:GSMUA_Achr9T20380_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0U1Z7
PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27003
PANTHER:PTHR27003:SF117	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI000294E342	:	:	:	:	:

Description

Putative Nodulation receptor kinase [Source:GMGC_GENE;Acc:GSMUA_Achr9G20380_001]

Coordinates

chr9:-:24338443..24341772

Molecular Weight (calculated)

37974.8 Da

IEP (calculated)

8.455

GRAVY (calculated)

-0.237

Length

335 amino acids

Sequence
(BLAST)

001: MEEILQATKN FSPSLKVGQG GFGTVYKGTL DDGTLIAVKR AKTSMHDNHV SVEFQSEIKI LGQIEHFNLV RFFGYLEDND ERVIVVEYVP NGTLREHLDG
101: FRGSYLDLSS RLDIAVDVAH AVTYLHMYAD NPIIHRDIKS SNILLTENLR AKVADFGFAR LGVNEAGVTH ISTQVKGTAG YLDPEYIRTY QLTDKSDVFS
201: FGVLLVELIS ARRPIERKRI LKERVTIKWA MKKFREGKTI QILDPNLPQT PANNLALEQI IELAVQCLAP FRQSRPCMRS CAEILWNIRK DHRELLSSDP
301: LSQTSHQRTL PSAATRVIFN IAREEMKTHA LALER

Best Arabidopsis Sequence Match ( AT4G00330.1 )
(BLAST)

001: MPSRRRHSYT VGSPATTSSN YSNTTFTDRS FPTTPARTST DTTTSIARRI SGIFINCFTP PDSVSSNYID NSKSSSDNNI RSRRSSTGSS SVQRSYGNAN
101: ETEHTRFTFD EIYDATKNFS PSFRIGQGGF GTVYKVKLRD GKTFAVKRAK KSMHDDRQGA DAEFMSEIQT LAQVTHLSLV KYYGFVVHND EKILVVEYVA
201: NGTLRDHLDC KEGKTLDMAT RLDIATDVAH AITYLHMYTQ PPIIHRDIKS SNILLTENYR AKVADFGFAR LAPDTDSGAT HVSTQVKGTA GYLDPEYLTT
301: YQLTEKSDVY SFGVLLVELL TGRRPIELSR GQKERITIRW AIKKFTSGDT ISVLDPKLEQ NSANNLALEK VLEMAFQCLA PHRRSRPSMK KCSEILWGIR
401: KDYRELLNTS L

Arabidopsis Description

CRCK2Calmodulin-binding receptor-like cytoplasmic kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZJ9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.