Factsheet for GSMUA_Achr2P04060_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plasma membrane 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P20380_001	Banana	cytosol	85.49	80.9
GSMUA_Achr5P10620_001	Banana	plastid	68.77	50.58
GSMUA_Achr1P03260_001	Banana	plastid	67.51	45.63
GSMUA_Achr1P17280_001	Banana	cytosol	59.31	44.98
HORVU6Hr1G091790.4	Barley	peroxisome, plastid	62.46	43.23
TraesCS6D01G383700.1	Wheat	plastid	62.46	42.67
TraesCS6A01G399500.1	Wheat	peroxisome, plastid	62.46	42.4
EES07775	Sorghum	plastid	62.15	42.37
Os02t0821400-01	Rice	cytosol, mitochondrion, nucleus, plastid	61.2	41.1
Zm00001d051887_P001	Maize	plastid	62.15	39.16
TraesCS6B01G439700.1	Wheat	plastid	62.46	38.9
GSMUA_Achr7P17040_001	Banana	plasma membrane	54.26	32.09
GSMUA_Achr2P05210_001	Banana	plasma membrane	53.94	31.32
GSMUA_Achr7P20840_001	Banana	mitochondrion	54.89	30.42
GSMUA_Achr6P06960_001	Banana	mitochondrion	40.06	17.54
GSMUA_Achr3P09580_001	Banana	plasma membrane	42.27	13.96
GSMUA_Achr4P00140_001	Banana	plasma membrane	40.69	13.81
GSMUA_Achr6P32410_001	Banana	plasma membrane	40.69	13.68
GSMUA_Achr6P28800_001	Banana	plasma membrane	41.32	13.63
GSMUA_Achr9P16880_001	Banana	plasma membrane	38.8	13.27
GSMUA_AchrUn_...	Banana	plasma membrane	40.69	12.95
GSMUA_Achr3P09570_001	Banana	plasma membrane	37.22	12.73
GSMUA_Achr9P16900_001	Banana	plasma membrane	37.54	12.73
GSMUA_AchrUn_...	Banana	plasma membrane	35.65	12.58
GSMUA_Achr9P02530_001	Banana	plasma membrane	35.33	11.8
GSMUA_Achr10P...	Banana	plasma membrane	32.49	11.12

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.34	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr2G04060_001	EnsemblPlants:GSMUA_Achr2P04060_001	EnsemblPlants:GSMUA_Achr2T04060_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0S4Z7
PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27003
PANTHER:PTHR27003:SF117	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI000295A396	:	:	:	:	:

Description

Putative Receptor-like protein kinase HERK 1 [Source:GMGC_GENE;Acc:GSMUA_Achr2G04060_001]

Coordinates

chr2:+:9550413..9553755

Molecular Weight (calculated)

36003.0 Da

IEP (calculated)

7.404

GRAVY (calculated)

-0.335

Length

317 amino acids

Sequence
(BLAST)

001: MEEILKATKN FSPSLKIGQG GFGTVYKATL DDGTPIAVKR AKKSTYENHL SVEFQSEINI LGQIEHLNLV RFFGYLEDND ERVVVTEYVP NGTLREHLDG
101: FRGNFLELSA RLDIAVDVAH AVTYLHMYAD HPIIHRDIKS SNILLTENLR AKVADFGFAR FGINEAGVTH ISTQVKGTAG YLDPEYLRTY QLTDKSDVYS
201: FGVLLVELIS SRRPIERKRE LKERITIKWA LKNFQQGKTI QVLDHNIPHT PANNLALEKI LELAFQCLAP SRQSRPSMRS CAEILWNIRK DYRELLSSDL
301: LSQTSHQRNL SISGDET

Best Arabidopsis Sequence Match ( AT4G00330.1 )
(BLAST)

001: MPSRRRHSYT VGSPATTSSN YSNTTFTDRS FPTTPARTST DTTTSIARRI SGIFINCFTP PDSVSSNYID NSKSSSDNNI RSRRSSTGSS SVQRSYGNAN
101: ETEHTRFTFD EIYDATKNFS PSFRIGQGGF GTVYKVKLRD GKTFAVKRAK KSMHDDRQGA DAEFMSEIQT LAQVTHLSLV KYYGFVVHND EKILVVEYVA
201: NGTLRDHLDC KEGKTLDMAT RLDIATDVAH AITYLHMYTQ PPIIHRDIKS SNILLTENYR AKVADFGFAR LAPDTDSGAT HVSTQVKGTA GYLDPEYLTT
301: YQLTEKSDVY SFGVLLVELL TGRRPIELSR GQKERITIRW AIKKFTSGDT ISVLDPKLEQ NSANNLALEK VLEMAFQCLA PHRRSRPSMK KCSEILWGIR
401: KDYRELLNTS L

Arabidopsis Description

CRCK2Calmodulin-binding receptor-like cytoplasmic kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZJ9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.