Factsheet for GSMUA_Achr6P06960_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
plasma membrane 1
mitochondrion 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P28800_001	Banana	plasma membrane	56.35	42.46
GSMUA_Achr2P04060_001	Banana	cytosol	17.54	40.06
GSMUA_Achr9P02530_001	Banana	plasma membrane	52.07	39.73
GSMUA_Achr9P20380_001	Banana	cytosol	18.23	39.4
GSMUA_Achr9P16880_001	Banana	plasma membrane	49.86	38.94
GSMUA_Achr3P09580_001	Banana	plasma membrane	51.38	38.75
GSMUA_AchrUn_...	Banana	plasma membrane	46.27	37.31
GSMUA_AchrUn_...	Banana	plasma membrane	48.62	35.34
GSMUA_Achr3P09570_001	Banana	plasma membrane	42.27	33.01
GSMUA_Achr1P17280_001	Banana	cytosol	18.78	32.54
GSMUA_Achr9P16900_001	Banana	plasma membrane	41.3	31.98
GSMUA_Achr10P...	Banana	plasma membrane	39.78	31.1
GSMUA_Achr5P10620_001	Banana	plastid	18.23	30.63
GSMUA_Achr6P32410_001	Banana	plasma membrane	35.77	27.47
GSMUA_Achr4P00140_001	Banana	plasma membrane	34.94	27.09
GSMUA_Achr1P03260_001	Banana	plastid	17.54	27.08
GSMUA_Achr2P05210_001	Banana	plasma membrane	19.89	26.37
GSMUA_Achr7P20840_001	Banana	mitochondrion	20.58	26.05
GSMUA_Achr7P17040_001	Banana	plasma membrane	19.2	25.93

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.8.1	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr6G06960_001
EnsemblPlants:GSMUA_Achr6P06960_001	EnsemblPlants:GSMUA_Achr6T06960_001	InterPro:IPR000719	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf
UniProt:M0T4U5	PFAM:PF07714	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27003
PANTHER:PTHR27003:SF134	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF52058	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI000296450D	SEG:seg	:

Description

Putative Probable leucine-rich repeat receptor-like protein kinase At5g49770 [Source:GMGC_GENE;Acc:GSMUA_Achr6G06960_001]

Coordinates

chr6:-:4723006..4726097

Molecular Weight (calculated)

80788.2 Da

IEP (calculated)

6.904

GRAVY (calculated)

-0.302

Length

724 amino acids

Sequence
(BLAST)

001: MNTVHNRILC LIHVLRRRLD RNQLTGAVPS NLNNLTKLAE LQLSNNQLSG PLPNLTGMDA LAYVDLSNNS FDVSDVPPWF STLPSLTTLM LEFLKVSGQI
101: PASLFGFPQM QKARLRSNLI NGTLDLGSQY SKQLTLVDVQ DNRVQELYYG GYSNELQLEG NPYCDQQGSV SKYCDVAQQS NPAATYSTPM QNCGASVCTS
201: DQEMSPNCIC SYPYEGTIVF RFLTFSNTEN YTYYQTLERY LSGSFQDNQV PVGSLSLQNP KINLYNYFEV DMWIFPSSKV HFDEPEVVLL ANLFSNTTFK
301: APPGFGPYYF IAKPYPSFAA ESGSKSKNAG LIAGITVGGL LLASVLAGLI IFAIRRRRRK VKKATEQSLP SGSWYPSQGG SGVPQLKGSR LFSFEELTKC
401: TNNFSEENVL GTGSYGKVYR GALDDGQLIA VKRAQQGSLQ GEHEFKTEIE MLSRVHHRNL VGLVGFCFDH NEQILVYEYI PNGSLRDSLS GKSGVHLDWK
501: KRLRIALDAA RGLTYLHELA NPRIIHRDVK SNNILLDHHL NAKVSDFGLC KPLNDDMKGY ITTQVKGTMG YLDPEYYMTQ HLTEKSDVYS FGVLLLELVT
601: ARKPIERGRF IVREVRNAIN KSPDLHDLRE LLDPAVCINS TLPGLDRFVE LAMKCVEDSS ADRPWMSEVA KEIENIMVLA GMNPYIASES NSASFGGERR
701: SHPYQSDVSF DYSGGPYSPK VEPK

Best Arabidopsis Sequence Match ( AT1G79620.1 )
(BLAST)

001: MVGSNTVTAT SRLLLICFAY SFTVFSMISS VTDPRDAAAL RSLMDQWDNT PPSWGGSDDP CGTPWEGVSC NNSRITALGL STMGLKGRLS GDIGELAELR
101: SLDLSFNRGL TGSLTSRLGD LQKLNILILA GCGFTGTIPN ELGYLKDLSF LALNSNNFTG KIPASLGNLT KVYWLDLADN QLTGPIPISS GSSPGLDLLL
201: KAKHFHFNKN QLSGTIPPKL FSSEMILIHV LFDGNRFTGS IPSTLGLIQT LEVLRLDRNT LTGKVPENLS NLTNIIELNL AHNKLVGSLP DLSDMKSMNY
301: VDLSNNSFDP SESPLWFSTL PSLTTLVMEY GSLQGPLPNK LFGFPQLQQV RLKKNAFNGT LSLGDTVGPE LQLVDLQDND ISSVTLSSGY TNTLILEGNP
401: VCTTALSNTN YCQIQQQQVK RIYSTSLANC GGKSCPLDQK VSPQSCECAY PYEGTLYFRG PMFRDLSNVN TYHSLEMSLW VKLGLTPGSV SLQNPFFNND
501: DYLQIQLALF PPMGKYFNRT EVQRIGFDLS NQTYKPPPLF GPYYFIASPY TFPADGNGHS LSSRMVTGII TGCSALVLCL VALGIYAMWQ KRRAEQAIGL
601: SRPFVSWASS GKDSGGAPQL KGARWFSYEE LKKITNNFSV SSELGYGGYG KVYKGMLQDG HMVAIKRAQQ GSTQGGLEFK TEIELLSRVH HKNLVGLVGF
701: CFEQGEQILV YEYMSNGSLK DSLTGRSGIT LDWKRRLRVA LGSARGLAYL HELADPPIIH RDVKSTNILL DENLTAKVAD FGLSKLVSDC TKGHVSTQVK
801: GTLGYLDPEY YTTQKLTEKS DVYSFGVVMM ELITAKQPIE KGKYIVREIK LVMNKSDDDF YGLRDKMDRS LRDVGTLPEL GRYMELALKC VDETADERPT
901: MSEVVKEIEI IIQNSGASSS SSASASSSAT DFGEKLLYGG TLKKKEARDG DGGGAFDYSG GYSVPTKIEP K

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:TAIR;Acc:AT1G79620]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.