Factsheet for GSMUA_Achr1P17280_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plasma membrane 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
EpiLoc:	plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P04060_001	Banana	cytosol	44.98	59.31
GSMUA_Achr9P20380_001	Banana	cytosol	44.5	55.52
HORVU3Hr1G085360.4	Barley	plastid	56.46	54.25
VIT_06s0004g06030.t01	Wine grape	cytosol	55.74	53.08
TraesCS3D01G359400.1	Wheat	mitochondrion	54.55	51.94
TraesCS3A01G366500.1	Wheat	mitochondrion, plastid	54.78	51.81
TraesCS3B01G398100.1	Wheat	mitochondrion	54.78	51.58
KXG33712	Sorghum	plastid	54.78	50.0
GSMUA_Achr5P10620_001	Banana	plastid	49.76	48.26
KRH16995	Soybean	plastid	50.48	46.07
KRH30349	Soybean	cytosol, mitochondrion, nucleus, plastid	49.52	45.8
KRG98306	Soybean	cytosol, plastid	49.28	45.47
KRH72632	Soybean	mitochondrion	49.76	45.41
TraesCS5D01G501800.1	Wheat	plastid	48.56	44.03
Os03t0825800-01	Rice	plasma membrane	46.17	43.57
EER90604	Sorghum	plastid	44.74	42.89
AT5G58940.1	Thale cress	cytosol, nucleus, plastid	47.85	42.55
Bra002607.1-P	Field mustard	plastid	47.85	42.37
GSMUA_Achr1P03260_001	Banana	plastid	46.65	41.58
TraesCS5B01G501300.2	Wheat	plastid	48.56	41.43
Zm00001d012929_P002	Maize	plastid	42.58	40.73
CDY54184	Canola	plasma membrane, vacuole	42.11	39.64
PGSC0003DMT400047464	Potato	cytosol	50.48	38.02
Solyc03g078470.2.1	Tomato	cytosol	17.46	37.82
GSMUA_Achr7P17040_001	Banana	plasma membrane	39.71	30.97
GSMUA_Achr2P05210_001	Banana	plasma membrane	39.95	30.59
GSMUA_Achr7P20840_001	Banana	mitochondrion	40.67	29.72
CDX80322	Canola	mitochondrion	47.85	22.15
GSMUA_Achr6P06960_001	Banana	mitochondrion	32.54	18.78
GSMUA_Achr6P32410_001	Banana	plasma membrane	34.69	15.38
GSMUA_Achr3P09570_001	Banana	plasma membrane	33.49	15.1
GSMUA_Achr6P28800_001	Banana	plasma membrane	34.69	15.09
GSMUA_AchrUn_...	Banana	plasma membrane	35.89	15.06
GSMUA_AchrUn_...	Banana	plasma membrane	31.82	14.81
GSMUA_Achr3P09580_001	Banana	plasma membrane	33.97	14.79
GSMUA_Achr9P16880_001	Banana	plasma membrane	32.78	14.78
GSMUA_Achr4P00140_001	Banana	plasma membrane	32.78	14.67
GSMUA_Achr9P16900_001	Banana	plasma membrane	32.3	14.44
GSMUA_Achr9P02530_001	Banana	plasma membrane	30.38	13.38
GSMUA_Achr10P...	Banana	plasma membrane	28.47	12.85

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.34	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004683	GO:GO:0005488	GO:GO:0005515	GO:GO:0005516
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009409	GO:GO:0009628	GO:GO:0009651	GO:GO:0009719	GO:GO:0009737	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0042542	EnsemblPlantsGene:GSMUA_Achr1G17280_001	EnsemblPlants:GSMUA_Achr1P17280_001
EnsemblPlants:GSMUA_Achr1T17280_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0S0N6	PFAM:PF07714	PIRSF:PIRSF000615
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27003	PANTHER:PTHR27003:SF63	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002961A4D
SEG:seg	:	:	:	:	:

Description

tyrosine protein kinase domain containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G17280_001]

Coordinates

chr1:+:12869779..12873184

Molecular Weight (calculated)

47144.8 Da

IEP (calculated)

9.706

GRAVY (calculated)

-0.565

Length

418 amino acids

Sequence
(BLAST)

001: MQKSDHYTSG FGDEKEDSDI SHRLPRDPDI SQASSYGSAR SISLSHSLSQ TTLRSSNSFR VKAQEFAAGF VTCFIPHRHA TCSKMSTISS GSNYRFRTHG
101: SYSKKETQQE TIRFSIEEIN KATSNFASEN RIGQGGFGAI YKGKLKDGTL IAVKRARKNM YDVHLSVEFK SEIETLSKVE HLNLVRFLGC LETDNERLIL
201: VEYVSNGNLR EHLDGTRGNG LEIGQRLNIA IDVAHAVAYL HTYADHPIIH RDIKASNILL TDKLRAKVAD FGFARLAAED PEATHVSTQI KGTAGYLDPE
301: YLRTYQLTEK SDVYSFGVLL VEIVTGRRPI ERNRDNRERV TTRWAIRRFK EGDAVMAMDP RLRRSPAAVG ATQRVLGLAE RCMEKDRRSR PSMRECAEVL
401: WGIRRDSQSM LQSSSTTR

Best Arabidopsis Sequence Match ( AT5G58940.2 )
(BLAST)

001: MPMRSKTPTP LRFSNGKHQR DDSEYSWTDV GTGEKARNVS VLGAIRRAAK KVFVIIFLGQ RKLKPTECRS DPGESSTHDR ESTLSGWTGY SSPSSFGRST
101: ERKVSGQYRF SGSRFQSPGK DSSSSKSWHQ GPVIFSFGEL QRATANFSSV HQIGEGGFGT VFKGKLDDGT IVAIKRARKN NYGKSWLLEF KNEIYTLSKI
201: EHMNLVKLYG FLEHGDEKVI VVEYVANGNL REHLDGLRGN RLEMAERLEI AIDVAHALTY LHTYTDSPII HRDIKASNIL ITNKLRAKVA DFGFARLVSE
301: DLGATHISTQ VKGSAGYVDP DYLRTFQLTD KSDVYSFGVL LVEILTGRRP IELKRPRKDR LTVKWALRRL KDDEAVLIMD PFLKRNRAAI EVAEKMLRLA
401: SECVTPTRAT RPAMKGIAEK LWAIRREMKE TMICSSASNS SCSSTTHSFI GRDSDRYALP RIEDNENSIE

Arabidopsis Description

CRCK1Calmodulin-binding receptor-like cytoplasmic kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIL7]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.