CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:

plastid 2
plasma membrane 1
mitochondrion 3
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG98306	Soybean	cytosol, plastid	92.7	92.49
KRH16995	Soybean	plastid	67.48	66.59
KRH72632	Soybean	mitochondrion	66.15	65.28
VIT_06s0004g06030.t01	Wine grape	cytosol	59.29	61.05
GSMUA_Achr1P17280_001	Banana	cytosol	45.8	49.52
AT5G58940.1	Thale cress	cytosol, nucleus, plastid	48.67	46.81
Bra002607.1-P	Field mustard	plastid	48.23	46.19
HORVU3Hr1G085360.4	Barley	plastid	44.25	45.98
TraesCS3B01G398100.1	Wheat	mitochondrion	44.25	45.05
TraesCS3D01G359400.1	Wheat	mitochondrion	43.58	44.87
TraesCS3A01G366500.1	Wheat	mitochondrion, plastid	43.58	44.57
CDY54184	Canola	plasma membrane, vacuole	42.04	42.79
KXG33712	Sorghum	plastid	42.04	41.48
PGSC0003DMT400047464	Potato	cytosol	50.44	41.08
Solyc03g078470.2.1	Tomato	cytosol	17.48	40.93
TraesCS5D01G501800.1	Wheat	plastid	39.82	39.05
EER90604	Sorghum	plastid	36.5	37.84
KRH26180	Soybean	cytosol	4.42	37.04
Os03t0825800-01	Rice	plasma membrane	36.06	36.79
TraesCS5B01G501300.2	Wheat	plastid	39.16	36.12
Zm00001d012929_P002	Maize	plastid	34.73	35.93
KRH03624	Soybean	plasma membrane	38.05	34.47
KRH20180	Soybean	plasma membrane	37.83	34.41
KRH72844	Soybean	plasma membrane, plastid	18.36	27.12
CDX80322	Canola	mitochondrion	48.01	24.03
KRH06617	Soybean	cytosol	42.7	21.28
KRH01898	Soybean	plasma membrane	25.0	20.29
KRH48103	Soybean	cytosol	44.25	19.25
KRH72846	Soybean	plasma membrane	30.97	15.93
KRH30677	Soybean	plasma membrane	31.42	14.88
KRG98103	Soybean	plasma membrane	31.19	14.8
KRH17213	Soybean	plasma membrane	30.31	14.5
KRH17216	Soybean	plasma membrane	29.87	14.26
KRH40653	Soybean	plasma membrane	30.09	14.23
KRH36702	Soybean	plasma membrane	29.42	13.94
KRH00507	Soybean	plasma membrane	29.42	13.9
KRH11702	Soybean	plasma membrane	28.98	13.69
KRH51255	Soybean	plasma membrane	28.1	13.66
KRH51256	Soybean	plasma membrane	29.65	13.58
KRH07655	Soybean	plasma membrane	28.98	13.55
KRH30865	Soybean	plasma membrane	27.88	13.53
KRH32710	Soybean	plasma membrane	27.88	13.52
KRH45351	Soybean	plasma membrane	28.76	13.42
KRH36704	Soybean	plastid	26.33	13.28
KRH00501	Soybean	plasma membrane	27.65	13.12

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100819818	MapMan:18.4.1.34	Gene3D:3.30.200.20	EMBL:ACUP02006992	ncoils:Coil
EnsemblPlantsGene:GLYMA_11G178300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	UniProt:I1LLF5	InterPro:IPR000719
EnsemblPlants:KRH30349	ProteinID:KRH30349	ProteinID:KRH30349.1	InterPro:Kinase-like_dom_sf	PFAM:PF07714	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27003	PANTHER:PTHR27003:SF63	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000233C84D	SEG:seg

Description

hypothetical protein

Coordinates

chr11:+:23026887..23031284

Molecular Weight (calculated)

51004.9 Da

IEP (calculated)

10.318

GRAVY (calculated)

-0.614

Length

452 amino acids

Sequence
(BLAST)

001: MKKTPAPSLH KSNQRKKNVG FQDRGAANGT QSHHVESHSA LTYFKSSFKK FFTLFLSGKR KTDSEAAESD DRKNTHKVRG VSSSTDVSSD SSKSSSKRVF
101: SHCSASSGTA SSKLGMGNFT FEEIYKATAK FSLENKIGEG AFGTVYKGKL NDGTLVAVKR AKKDLLNKNL AEFKNEINTL SKIEHINLVR WYGYLEHGHE
201: KIIVVEYISN GTLREHLDGI RGDGLEIGER LDIAIDIAHA ITYLHMYTDH PIIHRDVKAS NILITDKLRA KVADFGFARL GPEDPGATHI STQIKGTAGY
301: MDPDYMRTRH LSEKSDVYSF GVLLVEMMTG RYPVEPQRPP NERVTIKWAM QLLRQKEVVI AMDPRLRRNP TSNKAVQKVL KLAFQCLAPV RRSRPSMKSC
401: AEVLWEIRKD FKEKAFSHPP HHSADFPQRD ARKNRHKTYG IEDSKGYKFV FA

Best Arabidopsis Sequence Match ( AT5G58940.2 )
(BLAST)

001: MPMRSKTPTP LRFSNGKHQR DDSEYSWTDV GTGEKARNVS VLGAIRRAAK KVFVIIFLGQ RKLKPTECRS DPGESSTHDR ESTLSGWTGY SSPSSFGRST
101: ERKVSGQYRF SGSRFQSPGK DSSSSKSWHQ GPVIFSFGEL QRATANFSSV HQIGEGGFGT VFKGKLDDGT IVAIKRARKN NYGKSWLLEF KNEIYTLSKI
201: EHMNLVKLYG FLEHGDEKVI VVEYVANGNL REHLDGLRGN RLEMAERLEI AIDVAHALTY LHTYTDSPII HRDIKASNIL ITNKLRAKVA DFGFARLVSE
301: DLGATHISTQ VKGSAGYVDP DYLRTFQLTD KSDVYSFGVL LVEILTGRRP IELKRPRKDR LTVKWALRRL KDDEAVLIMD PFLKRNRAAI EVAEKMLRLA
401: SECVTPTRAT RPAMKGIAEK LWAIRREMKE TMICSSASNS SCSSTTHSFI GRDSDRYALP RIEDNENSIE

Arabidopsis Description

CRCK1Calmodulin-binding receptor-like cytoplasmic kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIL7]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.