CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 1
nucleus 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH16995	Soybean	plastid	95.2	95.2
KRG98306	Soybean	cytosol, plastid	67.25	67.99
KRH30349	Soybean	cytosol, mitochondrion, nucleus, plastid	65.28	66.15
VIT_06s0004g06030.t01	Wine grape	cytosol	59.39	61.96
GSMUA_Achr1P17280_001	Banana	cytosol	45.41	49.76
AT5G58940.1	Thale cress	cytosol, nucleus, plastid	49.13	47.87
Bra002607.1-P	Field mustard	plastid	48.91	47.46
CDY54184	Canola	plasma membrane, vacuole	43.23	44.59
HORVU3Hr1G085360.4	Barley	plastid	42.14	44.37
TraesCS3A01G366500.1	Wheat	mitochondrion, plastid	42.79	44.34
TraesCS3D01G359400.1	Wheat	mitochondrion	42.36	44.19
TraesCS3B01G398100.1	Wheat	mitochondrion	42.79	44.14
PGSC0003DMT400047464	Potato	cytosol	53.28	43.96
KXG33712	Sorghum	plastid	41.48	41.48
TraesCS5D01G501800.1	Wheat	plastid	41.05	40.78
Solyc03g078470.2.1	Tomato	cytosol	17.03	40.41
TraesCS5B01G501300.2	Wheat	plastid	40.61	37.96
Os03t0825800-01	Rice	plasma membrane	36.68	37.92
EER90604	Sorghum	plastid	35.37	37.16
Zm00001d012929_P002	Maize	plastid	34.72	36.38
KRH20180	Soybean	plasma membrane	38.21	35.21
KRH03624	Soybean	plasma membrane	38.21	35.07
KRH26180	Soybean	cytosol	3.93	33.33
KRH72844	Soybean	plasma membrane, plastid	18.78	28.1
CDX80322	Canola	mitochondrion	48.69	24.7
KRH06617	Soybean	cytosol	46.51	23.48
KRH01898	Soybean	plasma membrane	27.51	22.62
KRH48103	Soybean	cytosol	46.94	20.69
KRH72846	Soybean	plasma membrane	30.57	15.93
KRH07655	Soybean	plasma membrane	33.19	15.72
KRH45351	Soybean	plasma membrane	32.97	15.58
KRH36702	Soybean	plasma membrane	31.44	15.09
KRG98103	Soybean	plasma membrane	31.22	15.01
KRH51256	Soybean	plasma membrane	32.31	14.99
KRH40653	Soybean	plasma membrane	31.22	14.96
KRH11702	Soybean	plasma membrane	31.22	14.94
KRH36704	Soybean	plastid	29.04	14.84
KRH17213	Soybean	plasma membrane	30.57	14.81
KRH30677	Soybean	plasma membrane	30.57	14.68
KRH51255	Soybean	plasma membrane	29.69	14.62
KRH30865	Soybean	plasma membrane	29.69	14.61
KRH32710	Soybean	plasma membrane	29.69	14.59
KRH17216	Soybean	plasma membrane	30.13	14.57
KRH00507	Soybean	plasma membrane	30.35	14.52
KRH00501	Soybean	plasma membrane	28.82	13.85

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100788236	MapMan:18.4.1.34	Gene3D:3.30.200.20	EMBL:ACUP02001223	ncoils:Coil
EnsemblPlantsGene:GLYMA_02G224000	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	UniProt:I1JHA1	InterPro:IPR000719
EnsemblPlants:KRH72632	ProteinID:KRH72632	ProteinID:KRH72632.1	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000615
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27003	PANTHER:PTHR27003:SF63	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002337858
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:41164759..41168806

Molecular Weight (calculated)

51486.3 Da

IEP (calculated)

9.982

GRAVY (calculated)

-0.558

Length

458 amino acids

Sequence
(BLAST)

001: MKKTPPPNLH QSSKSRQNAN LQLVETNNDA KRHNSKTLRS LKYAAKKCVA VFSLIIYGKR KSASYVVGND DRKNTSKIRG VVSSSTDLSS ESTTKNSSKW
101: KFSYSYASSS TASGQLGIGN FSFEEIYKST AKFSPVNEIG QGGFGTVYKG KLNDGSIVAV KRAKKAVIQN HLHEFKNEIY TLSQIEHRNL VRLYGYLEHG
201: DEKIIVVEYV GNGNLREHLD GIRGEGLEIG ERLDIAIDVA HAITYLHMYT DNPIIHRDIK ASNILITENL KAKVADFGFA RLSDDPNATH ISTQVKGTAG
301: YMDPEYLRTY QLTEKSDVYS FGVLLVEMMT GRHPIEPKRP VDERVTIRWA MKMLKQGDAV FAMDPRLRRN SASIKAVKQV LKLALQCIAP SKQSRPPMKN
401: CAEVLWDIRK SFRDEANSDH APLPSHHSAN FPQREKNTFG MEEDDSYKFV SVPNHIRS

Best Arabidopsis Sequence Match ( AT5G58940.2 )
(BLAST)

001: MPMRSKTPTP LRFSNGKHQR DDSEYSWTDV GTGEKARNVS VLGAIRRAAK KVFVIIFLGQ RKLKPTECRS DPGESSTHDR ESTLSGWTGY SSPSSFGRST
101: ERKVSGQYRF SGSRFQSPGK DSSSSKSWHQ GPVIFSFGEL QRATANFSSV HQIGEGGFGT VFKGKLDDGT IVAIKRARKN NYGKSWLLEF KNEIYTLSKI
201: EHMNLVKLYG FLEHGDEKVI VVEYVANGNL REHLDGLRGN RLEMAERLEI AIDVAHALTY LHTYTDSPII HRDIKASNIL ITNKLRAKVA DFGFARLVSE
301: DLGATHISTQ VKGSAGYVDP DYLRTFQLTD KSDVYSFGVL LVEILTGRRP IELKRPRKDR LTVKWALRRL KDDEAVLIMD PFLKRNRAAI EVAEKMLRLA
401: SECVTPTRAT RPAMKGIAEK LWAIRREMKE TMICSSASNS SCSSTTHSFI GRDSDRYALP RIEDNENSIE

Arabidopsis Description

CRCK1Calmodulin-binding receptor-like cytoplasmic kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIL7]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.