CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
plasma membrane 1
cytosol 2
nucleus 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH30349	Soybean	cytosol, mitochondrion, nucleus, plastid	92.49	92.7
KRH16995	Soybean	plastid	69.54	68.78
KRH72632	Soybean	mitochondrion	67.99	67.25
VIT_06s0004g06030.t01	Wine grape	cytosol	61.37	63.33
GSMUA_Achr1P17280_001	Banana	cytosol	45.47	49.28
AT5G58940.1	Thale cress	cytosol, nucleus, plastid	49.45	47.66
Bra002607.1-P	Field mustard	plastid	49.45	47.46
HORVU3Hr1G085360.4	Barley	plastid	44.59	46.44
TraesCS3B01G398100.1	Wheat	mitochondrion	44.59	45.5
TraesCS3D01G359400.1	Wheat	mitochondrion	43.93	45.33
TraesCS3A01G366500.1	Wheat	mitochondrion, plastid	43.93	45.02
CDY54184	Canola	plasma membrane, vacuole	43.05	43.92
PGSC0003DMT400047464	Potato	cytosol	52.32	42.7
KXG33712	Sorghum	plastid	43.05	42.58
Solyc03g078470.2.1	Tomato	cytosol	17.44	40.93
TraesCS5D01G501800.1	Wheat	plastid	41.28	40.56
EER90604	Sorghum	plastid	38.19	39.68
Os03t0825800-01	Rice	plasma membrane	36.87	37.7
TraesCS5B01G501300.2	Wheat	plastid	40.62	37.55
Zm00001d012929_P002	Maize	plastid	35.32	36.61
KRH26180	Soybean	cytosol	4.19	35.19
KRH03624	Soybean	plasma membrane	37.97	34.47
KRH20180	Soybean	plasma membrane	37.75	34.41
KRH72844	Soybean	plasma membrane, plastid	18.32	27.12
CDX80322	Canola	mitochondrion	49.23	24.7
KRH06617	Soybean	cytosol	44.37	22.16
KRH01898	Soybean	plasma membrane	25.83	21.01
KRH48103	Soybean	cytosol	46.36	20.21
KRH72846	Soybean	plasma membrane	31.79	16.38
KRH30677	Soybean	plasma membrane	32.23	15.3
KRG98103	Soybean	plasma membrane	32.01	15.22
KRH17213	Soybean	plasma membrane	30.91	14.81
KRH40653	Soybean	plasma membrane	31.13	14.75
KRH17216	Soybean	plasma membrane	30.68	14.68
KRH36702	Soybean	plasma membrane	30.46	14.47
KRH51255	Soybean	plasma membrane	29.58	14.41
KRH30865	Soybean	plasma membrane	29.58	14.39
KRH32710	Soybean	plasma membrane	29.58	14.38
KRH00507	Soybean	plasma membrane	30.24	14.32
KRH11702	Soybean	plasma membrane	29.8	14.11
KRH51256	Soybean	plasma membrane	30.46	13.98
KRH36704	Soybean	plastid	27.59	13.95
KRH07655	Soybean	plasma membrane	29.58	13.86
KRH45351	Soybean	plasma membrane	29.36	13.73
KRH00501	Soybean	plasma membrane	28.48	13.54

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100815871	MapMan:18.4.1.34	Gene3D:3.30.200.20	EMBL:ACUP02010866	EnsemblPlantsGene:GLYMA_18G064100
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	UniProt:I1N008	InterPro:IPR000719	EnsemblPlants:KRG98306
ProteinID:KRG98306	ProteinID:KRG98306.1	InterPro:Kinase-like_dom_sf	PFAM:PF07714	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27003	PANTHER:PTHR27003:SF63	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001DBB1A7	SEG:seg	:

Description

hypothetical protein

Coordinates

chr18:-:5853137..5857011

Molecular Weight (calculated)

50758.4 Da

IEP (calculated)

10.220

GRAVY (calculated)

-0.636

Length

453 amino acids

Sequence
(BLAST)

001: MKKTPAPSLH QSNQRQKNVG FQDRGAANGT QSHSVQNHSA LTYFKSSFKK FFTLFLSGKR KTDSEAAESD DRKNTHKVRG VSSSTDVSSD SSKSSSKRVS
101: SHSSASSGPT RSSQLGMGNF TFEEIYKATA KFSLDNKIGE GAFGTVYKGK LNDGSLVAVK RAKKDLPNNN LAEFKNEINT LSKIEHINLV KWYGYLEHGH
201: EKIIVVEYVS NGTLREHLDG IRGDVLEIGE RLDIAIDIAH AITYLHMYTD HPIIHRDIKA SNILITDKLR AKVADFGFAR LGPEDPGATH ISTQIKGTAG
301: YMDPDYMRTQ HLSEKSDVYS FGVLLVEMMT GRHPIEPQRP LSERVTIKWA MQLLKQAEVV MAMDPRLRRN PASNKAVQKV LKLAFQCLAP GRQPRPSMKS
401: CAEVLWEIRK DFREKAFSHP PHHSADFPQR DGRKNRHKTY GIEDGKGYKF VSA

Best Arabidopsis Sequence Match ( AT5G58940.2 )
(BLAST)

001: MPMRSKTPTP LRFSNGKHQR DDSEYSWTDV GTGEKARNVS VLGAIRRAAK KVFVIIFLGQ RKLKPTECRS DPGESSTHDR ESTLSGWTGY SSPSSFGRST
101: ERKVSGQYRF SGSRFQSPGK DSSSSKSWHQ GPVIFSFGEL QRATANFSSV HQIGEGGFGT VFKGKLDDGT IVAIKRARKN NYGKSWLLEF KNEIYTLSKI
201: EHMNLVKLYG FLEHGDEKVI VVEYVANGNL REHLDGLRGN RLEMAERLEI AIDVAHALTY LHTYTDSPII HRDIKASNIL ITNKLRAKVA DFGFARLVSE
301: DLGATHISTQ VKGSAGYVDP DYLRTFQLTD KSDVYSFGVL LVEILTGRRP IELKRPRKDR LTVKWALRRL KDDEAVLIMD PFLKRNRAAI EVAEKMLRLA
401: SECVTPTRAT RPAMKGIAEK LWAIRREMKE TMICSSASNS SCSSTTHSFI GRDSDRYALP RIEDNENSIE

Arabidopsis Description

CRCK1Calmodulin-binding receptor-like cytoplasmic kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIL7]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.