Skip to main content
crop-pal logo
Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 6
  • golgi 3
  • mitochondrion 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G542300.1 Wheat plasma membrane 88.97 95.15
TraesCS3B01G602700.1 Wheat plasma membrane 88.47 95.03
TraesCS3A01G536900.1 Wheat extracellular 28.47 91.46
HORVU7Hr1G027310.14 Barley plasma membrane 78.82 83.86
Os01t0960400-01 Rice plasma membrane 76.26 81.3
KXG25749 Sorghum plastid 55.76 77.53
VIT_19s0014g05320.t01 Wine grape cytosol 16.55 74.01
GSMUA_Achr6P32410_001 Banana plasma membrane 61.77 66.49
Zm00001d004559_P021 Maize plasma membrane 71.53 65.35
VIT_06s0004g08250.t01 Wine grape plasma membrane 58.33 61.73
Solyc09g055570.2.1 Tomato plasma membrane 55.27 60.32
Bra015533.1-P Field mustard plasma membrane 55.96 59.85
AT1G06840.1 Thale cress plasma membrane, vacuole 56.16 59.81
CDY54882 Canola plasma membrane 55.86 59.75
CDY10230 Canola plasma membrane 56.06 59.71
HORVU0Hr1G001070.1 Barley plasma membrane 55.47 59.58
HORVU1Hr1G069400.2 Barley plasma membrane 55.27 59.37
HORVU3Hr1G080650.1 Barley plasma membrane 51.82 57.05
HORVU3Hr1G080330.51 Barley mitochondrion 31.23 35.34
HORVU1Hr1G069100.5 Barley plasma membrane 32.91 34.68
HORVU4Hr1G051120.9 Barley plasma membrane 31.33 32.89
HORVU4Hr1G080110.9 Barley plastid 13.79 32.79
HORVU3Hr1G085360.4 Barley plastid 13.69 31.95
HORVU3Hr1G017020.28 Barley plasma membrane 30.74 31.77
HORVU2Hr1G087030.2 Barley cytosol 13.0 31.73
HORVU2Hr1G100620.3 Barley cytosol 21.18 31.71
HORVU6Hr1G091790.4 Barley peroxisome, plastid 13.89 30.79
HORVU5Hr1G050870.3 Barley plasma membrane 14.38 27.04
HORVU2Hr1G100460.1 Barley extracellular 2.86 19.08
HORVU2Hr1G064310.1 Barley cytosol 0.3 5.45
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.8.1Gene3D:3.30.200.20Gene3D:3.80.10.10GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005515GO:GO:0005524
GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538
EnsemblPlantsGene:HORVU3Hr1G117890EnsemblPlants:HORVU3Hr1G117890.7InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sf
InterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptInterPro:Leu-rich_rpt_typical-subtypUniProt:M0WLB3PFAM:PF07714
PFAM:PF08263PFAM:PF13855ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27003
PANTHER:PTHR27003:SF101InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SMART:SM00369SUPFAM:SSF52058
SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI000296CC5F
SEG:seg:::::
Description
No Description!
Coordinates
chrchr3H:-:699560496..699569207
Molecular Weight (calculated)
111938.0 Da
IEP (calculated)
6.058
GRAVY (calculated)
-0.036
Length
1015 amino acids
Sequence
(BLAST)
0001: MLRFRLFYLC SVIFTLYSAH VQQPTNAQIT APWEVNALRA IRGSLSDPQG NLNNWNRGDP CVANWTRVIC YNVTATDDGY FHVKELQLLR LGLSGTLAPE
0101: LGQLSRMKIM DFMWNKITGS IPKEVGNITS LELLLVNGNQ LTGSLPEEIG FLPNLNRIQI DQNHISGPIP KSFANLNKTK HFHMNNNSLS GQIPPELSRL
0201: PSLVHMLLDN NNLSGYLPPE LAQLPKLLII QLDNNNFSGS SIPSAYGNIT TLLKLSLRNC SLEGPAPDVS GIPQLGYLDV SWNQLTGPIP SGQLASNITT
0301: IDFSHNRLNG SIPGSFSGLP NLQRLSLDNN NLDGSVPSDV WRNIDFSGNR SLILDFHNNG LTNLSNPLTP PTNVTILLSG NPVCQSQNQL NIAQYCQSTP
0401: EVIAEGGSID NSTICAPCAT DLPLESVIKA PNPCSCGVPL YIDYRLKSPG FWDFVPYEAQ FQEYLSSGLF LNSYQLEVTT FMWEEGPRLK MRLKLFPNNT
0501: ILFNSGEVQR LRYMFTGWLI ADSDIFGPYE LIDFNPGWYE NVLPRGTKKS LSTGGIVGIV IAAFAAAAVL SSLITLIILR RRSRQFSKKR TARRIPMKID
0601: GVKDFTFEEL SNCTNDFSES ALIGQGGYGK VYRGVLADGK IAAIKRAQEG SLQGSREFFT EIELLSRLHH RNLVSLLGYC DEEDEQMLVY EYMPNGTLRD
0701: HLSGYNLFSF CSLHLKFIIL LFSYMEIAFA FALLYVYFWC PASEVAWCFI IIIIIYVITA KAKEALSFPM RLRIALGSSR GILYLHTEAD PPIFHRDIKA
0801: SNILLDSKFV AKVADFGLSR LAPLPETEGS APGHVSTVVK GTPGYLDPEY FLTHKLTDKS DVYSLGVVFL ELLTGMQPIS HGKNLVREVV AANQSGMILS
0901: VVDLRMGAVP GECVERFAAL GLRCCRDETE ARPSMAEVVR ELETIWQMTP DTDGVPSESV AMDPTHTPGA SSSSTATGSR IVPGGNSNTE QYDMSSSDVS
1001: GSNLLSGVVP SINPR
Best Arabidopsis Sequence Match ( AT1G06840.1 )
(BLAST)
001: MFSTHHVSRL LIPLLFFFLF CCFSSTFAQD DITNPVEVRA LRVIKESLND PVHRLRNWKH GDPCNSNWTG VVCFNSTLDD GYLHVSELQL FSMNLSGNLS
101: PELGRLSRLT ILSFMWNKIT GSIPKEIGNI KSLELLLLNG NLLNGNLPEE LGFLPNLDRI QIDENRISGP LPKSFANLNK TKHFHMNNNS ISGQIPPELG
201: SLPSIVHILL DNNNLSGYLP PELSNMPRLL ILQLDNNHFD GTTIPQSYGN MSKLLKMSLR NCSLQGPVPD LSSIPNLGYL DLSQNQLNGS IPAGKLSDSI
301: TTIDLSNNSL TGTIPTNFSG LPRLQKLSLA NNALSGSIPS RIWQERELNS TESIIVDLRN NGFSNISGRS DLRPNVTVWL QGNPLCSDGN LLRLCGPITE
401: EDINQGSTNS NTTICSDCPP PYEFSPEPLR RCFCAAPLLV GYRLKSPGFS DFVPYRSEFE QYITSGLSLN LYQLRLDSFQ WQKGPRLRMY LKFFPVFGSN
501: ANNSFIFNRS EVRRIRGMFT GWNIRDEDLF GPYELMNFTL LDVYRDVFPS ASPSGLSNGA VAGIVLGSVA AAVTLTAIIA LIIMRKRMRG YSAVARRKRS
601: SKASLKIEGV KSFTYAELAL ATDNFNSSTQ IGQGGYGKVY KGTLGSGTVV AIKRAQEGSL QGEKEFLTEI ELLSRLHHRN LVSLLGFCDE EGEQMLVYEY
701: MENGTLRDNI SVKLKEPLDF AMRLRIALGS AKGILYLHTE ANPPIFHRDI KASNILLDSR FTAKVADFGL SRLAPVPDME GISPQHVSTV VKGTPGYLDP
801: EYFLTHQLTD KSDVYSLGVV LLELFTGMQP ITHGKNIVRE INIAYESGSI LSTVDKRMSS VPDECLEKFA TLALRCCREE TDARPSMAEV VRELEIIWEL
901: MPESHVAKTA DLSETMTHPS SSSNSSIMKH HYTSMDVSGS DLVSGVAPSV APR
Arabidopsis Description
Probable LRR receptor-like serine/threonine-protein kinase At1g06840 [Source:UniProtKB/Swiss-Prot;Acc:C0LGD7]
SUBAcon: [plasma membrane,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.