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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, vacuole

Predictor Summary:
  • endoplasmic reticulum 5
  • golgi 5
  • extracellular 5
  • vacuole 5
  • plasma membrane 5
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane, vacuole
Any Predictor:cytosol, secretory
BaCelLo:endoplasmic reticulum, extracellular, golgi
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY54882 Canola plasma membrane 87.3 87.67
Bra015533.1-P Field mustard plasma membrane 87.3 87.67
CDY10230 Canola plasma membrane 87.09 87.09
VIT_19s0014g05320.t01 Wine grape cytosol 18.78 78.85
VIT_06s0004g08250.t01 Wine grape plasma membrane 67.58 67.15
Solyc09g055570.2.1 Tomato plasma membrane 63.8 65.38
GSMUA_Achr6P32410_001 Banana plasma membrane 62.64 63.31
TraesCS3A01G536900.1 Wheat extracellular 20.78 62.66
Os01t0960400-01 Rice plasma membrane 61.59 61.66
TraesCS3D01G542300.1 Wheat plasma membrane 60.13 60.38
TraesCS3B01G602700.1 Wheat plasma membrane 59.5 60.0
KXG25749 Sorghum plastid 45.65 59.59
TraesCS7D01G129500.1 Wheat plasma membrane 59.18 59.24
TraesCS7B01G030400.1 Wheat plasma membrane 58.87 58.99
HORVU7Hr1G027310.14 Barley plasma membrane 58.97 58.91
TraesCS7A01G130100.2 Wheat plasma membrane 56.35 58.82
AT5G01950.7 Thale cress plasma membrane 56.77 56.59
HORVU3Hr1G117890.7 Barley plasma membrane 59.81 56.16
AT3G53590.1 Thale cress mitochondrion, plasma membrane 52.05 52.54
Zm00001d004559_P021 Maize plasma membrane 58.76 50.41
AT5G37450.2 Thale cress plasma membrane 50.79 49.24
AT5G49760.1 Thale cress plasma membrane 35.47 35.47
AT4G00330.2 Thale cress plastid 15.22 35.28
AT5G49770.1 Thale cress plasma membrane 34.0 34.25
AT1G79620.5 Thale cress plasma membrane 35.78 34.2
AT5G49780.2 Thale cress plasma membrane 34.31 33.44
AT5G58940.1 Thale cress cytosol, nucleus, plastid 15.01 30.43
AT2G11520.1 Thale cress plasma membrane 16.16 30.2
AT5G49750.1 Thale cress plasma membrane, vacuole 14.48 27.99
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.8.1Gene3D:3.30.200.20Gene3D:3.80.10.10EntrezGene:837196UniProt:A0A178W3Y7
ProteinID:AAF63151.1ProteinID:AEE28044.1ArrayExpress:AT1G06840EnsemblPlantsGene:AT1G06840RefSeq:AT1G06840TAIR:AT1G06840
RefSeq:AT1G06840-TAIR-GEnsemblPlants:AT1G06840.1TAIR:AT1G06840.1Unigene:At.42324UniProt:C0LGD7EMBL:FJ708626
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488
GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006464
GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538InterPro:IPR000719InterPro:IPR001611
InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptRefSeq:NP_172169.2
ProteinID:OAP12856.1PFAM:PF07714PFAM:PF08263PFAM:PF13855PO:PO:0000037PO:PO:0000230
PO:PO:0000293PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0005052
PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0009005
PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031
PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020100
PO:PO:0020137PO:PO:0025022PO:PO:0025281ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011
PANTHER:PTHR27003PANTHER:PTHR27003:SF101InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF52058
SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0001B9E761
SEG:seg:::::
Description
Probable LRR receptor-like serine/threonine-protein kinase At1g06840 [Source:UniProtKB/Swiss-Prot;Acc:C0LGD7]
Coordinates
chr1:-:2097747..2103507
Molecular Weight (calculated)
105631.0 Da
IEP (calculated)
6.846
GRAVY (calculated)
-0.150
Length
953 amino acids
Sequence
(BLAST)
001: MFSTHHVSRL LIPLLFFFLF CCFSSTFAQD DITNPVEVRA LRVIKESLND PVHRLRNWKH GDPCNSNWTG VVCFNSTLDD GYLHVSELQL FSMNLSGNLS
101: PELGRLSRLT ILSFMWNKIT GSIPKEIGNI KSLELLLLNG NLLNGNLPEE LGFLPNLDRI QIDENRISGP LPKSFANLNK TKHFHMNNNS ISGQIPPELG
201: SLPSIVHILL DNNNLSGYLP PELSNMPRLL ILQLDNNHFD GTTIPQSYGN MSKLLKMSLR NCSLQGPVPD LSSIPNLGYL DLSQNQLNGS IPAGKLSDSI
301: TTIDLSNNSL TGTIPTNFSG LPRLQKLSLA NNALSGSIPS RIWQERELNS TESIIVDLRN NGFSNISGRS DLRPNVTVWL QGNPLCSDGN LLRLCGPITE
401: EDINQGSTNS NTTICSDCPP PYEFSPEPLR RCFCAAPLLV GYRLKSPGFS DFVPYRSEFE QYITSGLSLN LYQLRLDSFQ WQKGPRLRMY LKFFPVFGSN
501: ANNSFIFNRS EVRRIRGMFT GWNIRDEDLF GPYELMNFTL LDVYRDVFPS ASPSGLSNGA VAGIVLGSVA AAVTLTAIIA LIIMRKRMRG YSAVARRKRS
601: SKASLKIEGV KSFTYAELAL ATDNFNSSTQ IGQGGYGKVY KGTLGSGTVV AIKRAQEGSL QGEKEFLTEI ELLSRLHHRN LVSLLGFCDE EGEQMLVYEY
701: MENGTLRDNI SVKLKEPLDF AMRLRIALGS AKGILYLHTE ANPPIFHRDI KASNILLDSR FTAKVADFGL SRLAPVPDME GISPQHVSTV VKGTPGYLDP
801: EYFLTHQLTD KSDVYSLGVV LLELFTGMQP ITHGKNIVRE INIAYESGSI LSTVDKRMSS VPDECLEKFA TLALRCCREE TDARPSMAEV VRELEIIWEL
901: MPESHVAKTA DLSETMTHPS SSSNSSIMKH HYTSMDVSGS DLVSGVAPSV APR
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.