Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 8
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G49760.1 | CDX73678 | AT3G51920.1 | 17360592 |
| AT5G49760.1 | CDX95314 | AT3G51920.1 | 17360592 |
| AT5G49760.1 | CDY23174 | AT3G51920.1 | 17360592 |
| AT5G49760.1 | CDY06478 | AT4G14640.1 | 17360592 |
| AT5G49760.1 | CDX92401 | AT5G21274.1 | 17360592 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY21453 | Canola | plastid | 45.54 | 98.86 |
| CDY21452 | Canola | plasma membrane | 98.22 | 98.22 |
| CDX83185 | Canola | extracellular | 25.29 | 97.57 |
| CDX83184 | Canola | plasma membrane | 97.38 | 97.38 |
| Bra000592.1-P | Field mustard | plasma membrane | 82.37 | 95.04 |
| CDY71822 | Canola | cytosol | 15.01 | 93.46 |
| CDX83183 | Canola | plasma membrane | 79.12 | 92.86 |
| CDY61244 | Canola | plasma membrane | 89.72 | 89.72 |
| CDY70266 | Canola | plasma membrane, plastid | 59.08 | 87.83 |
| CDY68959 | Canola | endoplasmic reticulum, golgi | 32.0 | 84.96 |
| AT5G49760.1 | Thale cress | plasma membrane | 84.05 | 84.05 |
| KRH26180 | Soybean | cytosol | 4.51 | 79.63 |
| CDY12940 | Canola | plasma membrane | 74.4 | 76.15 |
| CDY19539 | Canola | plasma membrane | 73.98 | 75.16 |
| CDY12939 | Canola | plasma membrane | 73.35 | 74.52 |
| KRH01898 | Soybean | plasma membrane | 32.32 | 55.3 |
| KRH30865 | Soybean | plasma membrane | 51.73 | 52.95 |
| KRH32710 | Soybean | plasma membrane | 51.63 | 52.79 |
| Solyc01g102680.2.1 | Tomato | plasma membrane | 49.53 | 49.17 |
| CDY49740 | Canola | cytosol | 51.31 | 35.03 |
| CDY54882 | Canola | plasma membrane | 34.84 | 34.98 |
| CDY10230 | Canola | plasma membrane | 34.63 | 34.63 |
| CDY11171 | Canola | plasma membrane | 34.1 | 34.43 |
| CDY57828 | Canola | plasma membrane | 34.1 | 34.43 |
| CDY61604 | Canola | plasma membrane | 34.0 | 34.39 |
| CDY07228 | Canola | plastid | 14.59 | 34.15 |
| CDY61605 | Canola | plasma membrane | 33.79 | 33.86 |
| CDY11169 | Canola | plasma membrane | 34.42 | 33.13 |
| CDY68957 | Canola | cytosol, plasma membrane | 14.48 | 32.47 |
| CDX81429 | Canola | plasma membrane | 16.26 | 30.82 |
| CDY68222 | Canola | plasma membrane | 16.26 | 30.82 |
| CDX93101 | Canola | plasma membrane | 15.53 | 30.02 |
| CDY50413 | Canola | plasma membrane | 15.43 | 29.82 |
| CDY22287 | Canola | cytosol | 51.73 | 28.68 |
| CDY54184 | Canola | plasma membrane, vacuole | 13.22 | 28.38 |
| CDX73538 | Canola | cytosol, plasma membrane | 31.48 | 26.06 |
| CDX78191 | Canola | cytosol, plasma membrane | 31.69 | 25.64 |
| CDX80322 | Canola | mitochondrion | 15.22 | 16.06 |
| CDY30856 | Canola | cytosol | 0.52 | 2.33 |
| CDX76198 | Canola | cytosol | 0.52 | 2.33 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.1.8.1 | Gene3D:3.30.200.20 | Gene3D:3.80.10.10 | GO:A0A078G4S3 | UniProt:A0A078G4S3 |
| EnsemblPlants:CDY21455 | ProteinID:CDY21455 | ProteinID:CDY21455.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004672 | GO:GO:0004674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00015859001 |
| InterPro:IPR000719 | InterPro:IPR001611 | InterPro:IPR032675 | InterPro:Kinase-like_dom_sf | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf |
| InterPro:Leu-rich_rpt | PFAM:PF00069 | PFAM:PF08263 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 |
| PFscan:PS51450 | PANTHER:PTHR27003 | PANTHER:PTHR27003:SF134 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 |
| SUPFAM:SSF52058 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0004EDE667 |
| SEG:seg | : | : | : | : | : |
Description
BnaC03g27420DBnaC03g27420D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G4S3]
Coordinates
chrLK032121:+:196774..201182
Molecular Weight (calculated)
104751.0 Da
IEP (calculated)
6.378
GRAVY (calculated)
-0.185
Length
953 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSRIGAFML LIFLFFQILS VSALTNGFDG PALQALKAEW TKPPSSWEGA DPCGTSWVGI TCSNNRVVSI SLGNLNVEGK LSGDIAALSE LQILDLSYNT
101: GLTGPLPPNI GELKKLKNLI LVGCSFTGQI PESIGQLEQL IYLSLNLNQF SGTIPASIGR LSKLYWFDIA DNQIEGTLPV SNGTSSPGLD MLLETKHFHF
201: GKNKLSGYIP ENLFSSNMTL IHVLFDGNQF TGKIPDTLSL VQTLTVLRLD RNKLTGNIPT SLNNLTSLQE LYLANNEFTG TLPNLTSLTS LYTLDVSNNT
301: FEPSPIPSWI SSLDSLATLR LEGIKLNGSI PNSFFSPAQL QTVILKRNQI DSTLDFGTSF SNQLEFVDLQ YNNIDVYKQP SSNTFIQVIL ADNPVCQEEG
401: NKPNYCSAIP PNTSYSTIPP TCTPCDQGRE ASPSCRCAHP IIGTLYFRSP SFSGLFNSTN FEILQKSIAN FSKKSSYPVD SVAVRNIREN ATDHQLLIDL
501: LVFPFGRESF NESGMSLVNF AFSNQIYKPP PRFGPYVFRA NPYNQFSDRG GPSSSNMGII IGAAVGAVVL LLLLTLAGVY ALRQRKRADK ATDQNNPFAK
601: WSTSKSSIDA PQLMGAKSFT FEELKKCTEN FSEANDVGGG GYGKVYRGIL PSGQLIAIKR AQQGSLQGGL EFKTEIELLS RVHHKNVVRL LGFCFDRREQ
701: MLVYEYIPNG SLRDSLSGKS GIRLDWTRRL KIALGSGKGL AYLHELADPP IIHRDIKSNN ILLDENLTAK VADFGLSKIV GDPEKTHVTT QVKGTMGYLD
801: PEYYMTNQLT EKSDVYGFGV VMLELLTGKS PIERGKYVVR EVKTKMNKSR SLYDLQELMD TTIIASSSNL KGFEKYVDLA LRCVEEEGVN RPSMGEVVKE
901: IENIMQLAGL NPNVDSASSS RTYEEAIKGS GDPYGKDSFE YSGNFPASKL EPQ
101: GLTGPLPPNI GELKKLKNLI LVGCSFTGQI PESIGQLEQL IYLSLNLNQF SGTIPASIGR LSKLYWFDIA DNQIEGTLPV SNGTSSPGLD MLLETKHFHF
201: GKNKLSGYIP ENLFSSNMTL IHVLFDGNQF TGKIPDTLSL VQTLTVLRLD RNKLTGNIPT SLNNLTSLQE LYLANNEFTG TLPNLTSLTS LYTLDVSNNT
301: FEPSPIPSWI SSLDSLATLR LEGIKLNGSI PNSFFSPAQL QTVILKRNQI DSTLDFGTSF SNQLEFVDLQ YNNIDVYKQP SSNTFIQVIL ADNPVCQEEG
401: NKPNYCSAIP PNTSYSTIPP TCTPCDQGRE ASPSCRCAHP IIGTLYFRSP SFSGLFNSTN FEILQKSIAN FSKKSSYPVD SVAVRNIREN ATDHQLLIDL
501: LVFPFGRESF NESGMSLVNF AFSNQIYKPP PRFGPYVFRA NPYNQFSDRG GPSSSNMGII IGAAVGAVVL LLLLTLAGVY ALRQRKRADK ATDQNNPFAK
601: WSTSKSSIDA PQLMGAKSFT FEELKKCTEN FSEANDVGGG GYGKVYRGIL PSGQLIAIKR AQQGSLQGGL EFKTEIELLS RVHHKNVVRL LGFCFDRREQ
701: MLVYEYIPNG SLRDSLSGKS GIRLDWTRRL KIALGSGKGL AYLHELADPP IIHRDIKSNN ILLDENLTAK VADFGLSKIV GDPEKTHVTT QVKGTMGYLD
801: PEYYMTNQLT EKSDVYGFGV VMLELLTGKS PIERGKYVVR EVKTKMNKSR SLYDLQELMD TTIIASSSNL KGFEKYVDLA LRCVEEEGVN RPSMGEVVKE
901: IENIMQLAGL NPNVDSASSS RTYEEAIKGS GDPYGKDSFE YSGNFPASKL EPQ
001: MSSRTGASLL LILFFFQICS VSALTNGLDA SALNALKSEW TTPPDGWEGS DPCGTNWVGI TCQNDRVVSI SLGNLDLEGK LPADISFLSE LRILDLSYNP
101: KLSGPLPPNI GNLGKLRNLI LVGCSFSGQI PESIGTLKEL IYLSLNLNKF SGTIPPSIGL LSKLYWFDIA DNQIEGELPV SNGTSAPGLD MLLQTKHFHF
201: GKNKLSGNIP KELFSSNMSL IHVLFDGNQF TGEIPETLSL VKTLTVLRLD RNKLIGDIPS YLNNLTNLNE LYLANNRFTG TLPNLTSLTS LYTLDVSNNT
301: LDFSPIPSWI SSLPSLSTLR MEGIQLNGPI PISFFSPPQL QTVILKRNSI VESLDFGTDV SSQLEFVDLQ YNEITDYKPS ANKVLQVILA NNPVCLEAGN
401: GPSYCSAIQH NTSFSTLPTN CSPCEPGMEA SPTCRCAYPF MGTLYFRSPS FSGLFNSTNF SILQKAIADF FKKFNYPVDS VGVRNIRENP TDHQLLIDLL
501: VFPLGRESFN QTGMSLVGFA FSNQTYKPPP IFGPYIFKAD LYKQFSDVEV SSKSSNKSIL IGAVVGVVVL LLLLTIAGIY ALRQKKRAER ATGQNNPFAK
601: WDTSKSSIDA PQLMGAKAFT FEELKKCTDN FSEANDVGGG GYGKVYRGIL PNGQLIAIKR AQQGSLQGGL EFKTEIELLS RVHHKNVVRL LGFCFDRNEQ
701: MLVYEYISNG SLKDSLSGKS GIRLDWTRRL KIALGSGKGL AYLHELADPP IIHRDIKSNN ILLDENLTAK VADFGLSKLV GDPEKTHVTT QVKGTMGYLD
801: PEYYMTNQLT EKSDVYGFGV VLLELLTGRS PIERGKYVVR EVKTKMNKSR SLYDLQELLD TTIIASSGNL KGFEKYVDLA LRCVEEEGVN RPSMGEVVKE
901: IENIMQLAGL NPNSDSATSS RTYEDAIKGS GDPYGSESFQ YSGNFPASKL EPQ
101: KLSGPLPPNI GNLGKLRNLI LVGCSFSGQI PESIGTLKEL IYLSLNLNKF SGTIPPSIGL LSKLYWFDIA DNQIEGELPV SNGTSAPGLD MLLQTKHFHF
201: GKNKLSGNIP KELFSSNMSL IHVLFDGNQF TGEIPETLSL VKTLTVLRLD RNKLIGDIPS YLNNLTNLNE LYLANNRFTG TLPNLTSLTS LYTLDVSNNT
301: LDFSPIPSWI SSLPSLSTLR MEGIQLNGPI PISFFSPPQL QTVILKRNSI VESLDFGTDV SSQLEFVDLQ YNEITDYKPS ANKVLQVILA NNPVCLEAGN
401: GPSYCSAIQH NTSFSTLPTN CSPCEPGMEA SPTCRCAYPF MGTLYFRSPS FSGLFNSTNF SILQKAIADF FKKFNYPVDS VGVRNIRENP TDHQLLIDLL
501: VFPLGRESFN QTGMSLVGFA FSNQTYKPPP IFGPYIFKAD LYKQFSDVEV SSKSSNKSIL IGAVVGVVVL LLLLTIAGIY ALRQKKRAER ATGQNNPFAK
601: WDTSKSSIDA PQLMGAKAFT FEELKKCTDN FSEANDVGGG GYGKVYRGIL PNGQLIAIKR AQQGSLQGGL EFKTEIELLS RVHHKNVVRL LGFCFDRNEQ
701: MLVYEYISNG SLKDSLSGKS GIRLDWTRRL KIALGSGKGL AYLHELADPP IIHRDIKSNN ILLDENLTAK VADFGLSKLV GDPEKTHVTT QVKGTMGYLD
801: PEYYMTNQLT EKSDVYGFGV VLLELLTGRS PIERGKYVVR EVKTKMNKSR SLYDLQELLD TTIIASSGNL KGFEKYVDLA LRCVEEEGVN RPSMGEVVKE
901: IENIMQLAGL NPNSDSATSS RTYEDAIKGS GDPYGSESFQ YSGNFPASKL EPQ
Arabidopsis Description
At5g49760 [Source:UniProtKB/TrEMBL;Acc:Q8GZ99]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.