CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX73678
CDX92401
CDX95314
CDY06478
CDY23174

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G49760.1	CDX73678	AT3G51920.1	17360592
AT5G49760.1	CDX95314	AT3G51920.1	17360592
AT5G49760.1	CDY23174	AT3G51920.1	17360592
AT5G49760.1	CDY06478	AT4G14640.1	17360592
AT5G49760.1	CDX92401	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71822	Canola	cytosol	18.35	97.39
CDX83185	Canola	extracellular	28.82	94.74
CDY68959	Canola	endoplasmic reticulum, golgi	37.32	84.4
Bra000592.1-P	Field mustard	plasma membrane	82.76	81.36
CDY21452	Canola	plasma membrane	93.84	79.96
CDX83184	Canola	plasma membrane	93.1	79.33
CDY21455	Canola	plasma membrane	92.86	79.12
KRH26180	Soybean	cytosol	5.05	75.93
CDY61244	Canola	plasma membrane	87.44	74.5
AT5G49760.1	Thale cress	plasma membrane	81.16	69.15
CDY70266	Canola	plasma membrane, plastid	51.35	65.05
CDY21453	Canola	plastid	35.1	64.92
CDY12940	Canola	plasma membrane	72.66	63.37
CDY19539	Canola	plasma membrane	73.15	63.33
CDY12939	Canola	plasma membrane	72.04	62.37
KRH01898	Soybean	plasma membrane	31.03	45.24
KRH30865	Soybean	plasma membrane	49.88	43.5
KRH32710	Soybean	plasma membrane	49.88	43.45
Solyc01g102680.2.1	Tomato	plasma membrane	49.01	41.46
CDY49740	Canola	cytosol	50.74	29.51
CDY54882	Canola	plasma membrane	33.74	28.87
CDY11171	Canola	plasma membrane	33.37	28.71
CDY57828	Canola	plasma membrane	33.37	28.71
CDY61604	Canola	plasma membrane	33.25	28.66
CDY10230	Canola	plasma membrane	33.5	28.54
CDY61605	Canola	plasma membrane	33.13	28.29
CDY11169	Canola	plasma membrane	33.87	27.78
CDY07228	Canola	plastid	12.44	24.82
CDY22287	Canola	cytosol	51.35	24.26
CDY54184	Canola	plasma membrane, vacuole	12.93	23.65
CDY68957	Canola	cytosol, plasma membrane	12.32	23.53
CDY68222	Canola	plasma membrane	14.29	23.06
CDX81429	Canola	plasma membrane	14.29	23.06
CDX93101	Canola	plasma membrane	13.79	22.72
CDY50413	Canola	plasma membrane	13.42	22.11
CDX73538	Canola	cytosol, plasma membrane	30.42	21.46
CDX78191	Canola	cytosol, plasma membrane	30.79	21.22
CDX80322	Canola	mitochondrion	12.68	11.41
CDY30856	Canola	cytosol	0.62	2.33
CDX76198	Canola	cytosol	0.62	2.33

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.8.1	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:A0A078D7G1	EnsemblPlants:CDX83183
ProteinID:CDX83183	ProteinID:CDX83183.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00138717001
InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	PFAM:PF00069	PFAM:PF08263	PFAM:PF13855	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PFscan:PS51450	PANTHER:PTHR27003	PANTHER:PTHR27003:SF134	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0004EF2D24	SEG:seg	:	:	:	:

Description

BnaA03g23230D

Coordinates

chrLK031832:+:285758..291740

Molecular Weight (calculated)

88827.9 Da

IEP (calculated)

8.387

GRAVY (calculated)

-0.046

Length

812 amino acids

Sequence
(BLAST)

001: MSSRIGAVML LIFLFFQIFS VSALTNGFDG AALQALKAEW TKPPSSWDGD DPCGTSWVGI TCISDRVVSI SLGNLNVEGK LSGDIAALSE LQILDLSYNT
101: GLTGPLPPNI GETKKLKNLI LVGCSFTGQI PESIGKLEQL IYLSLNLNQF SGTIPASIGR LSKLYWFDIA DNQIEGTLPV SNGTSLPGLD MLLETKHFHF
201: GKNKLSGHIP ENLFSSKMTL IHVLFDGNQF TGKIPDTLSL VKTLTVLRLD RNKLTGNIPT SLNNLTSLQE LYLANNEFTG ILPSLTSLTS LCTLDVSNNT
301: LESSPIPSWI SSLRSLATLR MEGIKLNGSI PNSFFSPAQL QTVILKKNQI DSTLDFGASF SNQLEFVNLQ YNNIDVYKQP SSNTRIQVML ADNPVCQELG
401: NRPSYCSAIQ PNTSYSTIPP ACLPCDQGRE ASPSCRCAHP ITGTLYFGSP SFSGLFNSTN FEILQKAIAD FFKKLSYPVD SVAIRNIREN ATDHQLLIDL
501: LVFPLGRESF NESGMSLVNF AFSNQTYKPP PRFGPYVFRA NPYNQFSDRG GSSSSNMGII IGAAVGAVVL LLLLTLAGVY ALRQRKRADR ATDQNNPFAK
601: WNTSKSSTDA PQLMGAKAFT FEELKKCTEN FSEANDVGGG GYGKVYRGIL PSGQLIAIKR AQQGSLQGGL EFKTEIELLS RVHHKNVVRL LGFCFDRSEQ
701: MLVYEYIPNG SLRDSLSGKS GIRLDWTRRL KIALGSGKGL AYLHELADPP IIHRDIKSNN ILLDENLTAK VADFGLSKIV GDPEKTHVTT QVKGTMVSRK
801: SVIIIVLFSY IL

Best Arabidopsis Sequence Match ( AT5G49760.1 )
(BLAST)

001: MSSRTGASLL LILFFFQICS VSALTNGLDA SALNALKSEW TTPPDGWEGS DPCGTNWVGI TCQNDRVVSI SLGNLDLEGK LPADISFLSE LRILDLSYNP
101: KLSGPLPPNI GNLGKLRNLI LVGCSFSGQI PESIGTLKEL IYLSLNLNKF SGTIPPSIGL LSKLYWFDIA DNQIEGELPV SNGTSAPGLD MLLQTKHFHF
201: GKNKLSGNIP KELFSSNMSL IHVLFDGNQF TGEIPETLSL VKTLTVLRLD RNKLIGDIPS YLNNLTNLNE LYLANNRFTG TLPNLTSLTS LYTLDVSNNT
301: LDFSPIPSWI SSLPSLSTLR MEGIQLNGPI PISFFSPPQL QTVILKRNSI VESLDFGTDV SSQLEFVDLQ YNEITDYKPS ANKVLQVILA NNPVCLEAGN
401: GPSYCSAIQH NTSFSTLPTN CSPCEPGMEA SPTCRCAYPF MGTLYFRSPS FSGLFNSTNF SILQKAIADF FKKFNYPVDS VGVRNIRENP TDHQLLIDLL
501: VFPLGRESFN QTGMSLVGFA FSNQTYKPPP IFGPYIFKAD LYKQFSDVEV SSKSSNKSIL IGAVVGVVVL LLLLTIAGIY ALRQKKRAER ATGQNNPFAK
601: WDTSKSSIDA PQLMGAKAFT FEELKKCTDN FSEANDVGGG GYGKVYRGIL PNGQLIAIKR AQQGSLQGGL EFKTEIELLS RVHHKNVVRL LGFCFDRNEQ
701: MLVYEYISNG SLKDSLSGKS GIRLDWTRRL KIALGSGKGL AYLHELADPP IIHRDIKSNN ILLDENLTAK VADFGLSKLV GDPEKTHVTT QVKGTMGYLD
801: PEYYMTNQLT EKSDVYGFGV VLLELLTGRS PIERGKYVVR EVKTKMNKSR SLYDLQELLD TTIIASSGNL KGFEKYVDLA LRCVEEEGVN RPSMGEVVKE
901: IENIMQLAGL NPNSDSATSS RTYEDAIKGS GDPYGSESFQ YSGNFPASKL EPQ

Arabidopsis Description

At5g49760 [Source:UniProtKB/TrEMBL;Acc:Q8GZ99]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.