CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

plastid 3
mitochondrion 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, plastid
Any Predictor:	plasma membrane, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX73678
CDX92401
CDX95314
CDY06478
CDY23174

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G49760.1	CDX73678	AT3G51920.1	17360592
AT5G49760.1	CDX95314	AT3G51920.1	17360592
AT5G49760.1	CDY23174	AT3G51920.1	17360592
AT5G49760.1	CDY06478	AT4G14640.1	17360592
AT5G49760.1	CDX92401	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21453	Canola	plastid	63.96	93.39
KRH26180	Soybean	cytosol	6.71	79.63
CDY61244	Canola	plasma membrane	95.16	64.01
CDY21455	Canola	plasma membrane	87.83	59.08
CDY21452	Canola	plasma membrane	87.83	59.08
CDX83184	Canola	plasma membrane	87.68	58.97
AT5G49760.1	Thale cress	plasma membrane	83.78	56.35
CDX83183	Canola	plasma membrane	65.05	51.35
KRH01898	Soybean	plasma membrane	44.46	51.17
CDY12940	Canola	plasma membrane	70.51	48.55
CDY19539	Canola	plasma membrane	70.36	48.08
CDY12939	Canola	plasma membrane	69.89	47.76
KRH30865	Soybean	plasma membrane	53.04	36.52
KRH32710	Soybean	plasma membrane	53.04	36.48
Solyc01g102680.2.1	Tomato	plasma membrane	47.89	31.98
CDY07228	Canola	plastid	20.28	31.94
CDY68957	Canola	cytosol, plasma membrane	19.97	30.12
CDY68222	Canola	plasma membrane	21.06	26.84
CDX81429	Canola	plasma membrane	21.06	26.84
CDY50413	Canola	plasma membrane	20.28	26.37
CDX93101	Canola	plasma membrane	20.28	26.37
CDY54184	Canola	plasma membrane, vacuole	17.78	25.68
CDY54882	Canola	plasma membrane	35.57	24.03
CDY10230	Canola	plasma membrane	35.41	23.82
CDY61605	Canola	plasma membrane	34.79	23.45
CDY11171	Canola	plasma membrane	33.85	22.99
CDY57828	Canola	plasma membrane	33.85	22.99
CDY61604	Canola	plasma membrane	33.7	22.93
CDY11169	Canola	plasma membrane	34.95	22.63
CDY49740	Canola	cytosol	48.83	22.42
CDY22287	Canola	cytosol	49.61	18.5
CDX73538	Canola	cytosol, plasma membrane	32.29	17.98
CDX78191	Canola	cytosol, plasma membrane	32.29	17.57
CDX80322	Canola	mitochondrion	20.59	14.62
CDX83185	Canola	extracellular	1.25	3.24
CDY68959	Canola	endoplasmic reticulum, golgi	1.72	3.06
CDY71822	Canola	cytosol	0.62	2.61
CDX76198	Canola	cytosol	0.16	0.47
CDY30856	Canola	cytosol	0.16	0.47

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.8.1	Gene3D:3.30.200.20	GO:A0A078JXU7	UniProt:A0A078JXU7	EnsemblPlants:CDY70266
ProteinID:CDY70266	ProteinID:CDY70266.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00097646001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27003	PANTHER:PTHR27003:SF134
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix
UniParc:UPI0004EED8FC	SEG:seg	:	:	:	:

Description

BnaCnng67530DBnaCnng67530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JXU7]

Coordinates

chrLK041627:-:509..3068

Molecular Weight (calculated)

71042.5 Da

IEP (calculated)

7.191

GRAVY (calculated)

-0.265

Length

641 amino acids

Sequence
(BLAST)

001: MSKRTAPISK STQCCHICTY YTFFSFFFNF SILKRNRINS ALDFGTSYSN QLEFVDLQYN DIDVYTQPSS NTRIQVILAN NPVCQEQGNS PSYCSAIPHN
101: TSYSTIPTTC SPCDHGREAS PSCRCAHPFT GTFNFRAPSF SGLFNSTNFE ILQKDITGFF NKFSYPVDSV AVRNIRENTT DHQLLIDLLV FPLGRESFNE
201: TGMLLVNFAF SNQTYKPPPI FGPYIFIADP YTQFSDGGGF KSSNMGVIIG AAVGCAVLLL LLTLAGVYAL CQRKRADRAT DQNNPFAKWS TSKSSIDAPQ
301: LMGAKSFTFE ELKKCTDNFS EANDVGGGGY GKVYRGILPS GQLIAIKRAQ QGSLQGGLEF KTEIELLSRV HHKNVVRLLG FCFDRSEQML VYEYIPNGSL
401: RDSLSGKSGI RLDWIRRLRI ALGSGKGLAY LHELADPPII HRDIKSNNIL LDENLTAKVA DFGLSKLVGD PEKTHVTTQV KGTMGYLDPE YYMTNQLTEK
501: SDVYGFGVVM LELLTGKSPI EKGKYVVREV KMKMNKSRSL YDLQELLDTT IIASSSNLKG FDKYVDLALR CVEEEGVNRP SMGEVVKEIE NIMQLAGLNP
601: NGDSASTSAT YEDAIKGSGD PYGKDSFQYS GNFPASKLEP Q

Best Arabidopsis Sequence Match ( AT5G49760.1 )
(BLAST)

001: MSSRTGASLL LILFFFQICS VSALTNGLDA SALNALKSEW TTPPDGWEGS DPCGTNWVGI TCQNDRVVSI SLGNLDLEGK LPADISFLSE LRILDLSYNP
101: KLSGPLPPNI GNLGKLRNLI LVGCSFSGQI PESIGTLKEL IYLSLNLNKF SGTIPPSIGL LSKLYWFDIA DNQIEGELPV SNGTSAPGLD MLLQTKHFHF
201: GKNKLSGNIP KELFSSNMSL IHVLFDGNQF TGEIPETLSL VKTLTVLRLD RNKLIGDIPS YLNNLTNLNE LYLANNRFTG TLPNLTSLTS LYTLDVSNNT
301: LDFSPIPSWI SSLPSLSTLR MEGIQLNGPI PISFFSPPQL QTVILKRNSI VESLDFGTDV SSQLEFVDLQ YNEITDYKPS ANKVLQVILA NNPVCLEAGN
401: GPSYCSAIQH NTSFSTLPTN CSPCEPGMEA SPTCRCAYPF MGTLYFRSPS FSGLFNSTNF SILQKAIADF FKKFNYPVDS VGVRNIRENP TDHQLLIDLL
501: VFPLGRESFN QTGMSLVGFA FSNQTYKPPP IFGPYIFKAD LYKQFSDVEV SSKSSNKSIL IGAVVGVVVL LLLLTIAGIY ALRQKKRAER ATGQNNPFAK
601: WDTSKSSIDA PQLMGAKAFT FEELKKCTDN FSEANDVGGG GYGKVYRGIL PNGQLIAIKR AQQGSLQGGL EFKTEIELLS RVHHKNVVRL LGFCFDRNEQ
701: MLVYEYISNG SLKDSLSGKS GIRLDWTRRL KIALGSGKGL AYLHELADPP IIHRDIKSNN ILLDENLTAK VADFGLSKLV GDPEKTHVTT QVKGTMGYLD
801: PEYYMTNQLT EKSDVYGFGV VLLELLTGRS PIERGKYVVR EVKTKMNKSR SLYDLQELLD TTIIASSGNL KGFEKYVDLA LRCVEEEGVN RPSMGEVVKE
901: IENIMQLAGL NPNSDSATSS RTYEDAIKGS GDPYGSESFQ YSGNFPASKL EPQ

Arabidopsis Description

At5g49760 [Source:UniProtKB/TrEMBL;Acc:Q8GZ99]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.