Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 8
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G49760.1 | CDX73678 | AT3G51920.1 | 17360592 |
| AT5G49760.1 | CDX95314 | AT3G51920.1 | 17360592 |
| AT5G49760.1 | CDY23174 | AT3G51920.1 | 17360592 |
| AT5G49760.1 | CDY06478 | AT4G14640.1 | 17360592 |
| AT5G49760.1 | CDX92401 | AT5G21274.1 | 17360592 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037952.1-P | Field mustard | plasma membrane | 97.06 | 98.4 |
| CDY70266 | Canola | plasma membrane, plastid | 64.01 | 95.16 |
| CDY68959 | Canola | endoplasmic reticulum, golgi | 35.57 | 94.43 |
| CDY21453 | Canola | plastid | 43.13 | 93.62 |
| CDY71822 | Canola | cytosol | 15.01 | 93.46 |
| CDX83184 | Canola | plasma membrane | 89.93 | 89.93 |
| CDY21455 | Canola | plasma membrane | 89.72 | 89.72 |
| CDY21452 | Canola | plasma membrane | 89.4 | 89.4 |
| CDX83185 | Canola | extracellular | 22.88 | 88.26 |
| CDX83183 | Canola | plasma membrane | 74.5 | 87.44 |
| AT5G49760.1 | Thale cress | plasma membrane | 84.37 | 84.37 |
| KRH26180 | Soybean | cytosol | 4.51 | 79.63 |
| CDY12940 | Canola | plasma membrane | 74.4 | 76.15 |
| CDY19539 | Canola | plasma membrane | 74.08 | 75.27 |
| CDY12939 | Canola | plasma membrane | 73.35 | 74.52 |
| KRH01898 | Soybean | plasma membrane | 32.0 | 54.76 |
| KRH30865 | Soybean | plasma membrane | 52.99 | 54.24 |
| KRH32710 | Soybean | plasma membrane | 52.89 | 54.08 |
| Solyc01g102680.2.1 | Tomato | plasma membrane | 48.9 | 48.54 |
| CDY54882 | Canola | plasma membrane | 35.47 | 35.62 |
| CDY10230 | Canola | plasma membrane | 35.15 | 35.15 |
| CDY11171 | Canola | plasma membrane | 34.73 | 35.06 |
| CDY57828 | Canola | plasma membrane | 34.73 | 35.06 |
| CDY61604 | Canola | plasma membrane | 34.63 | 35.03 |
| CDY49740 | Canola | cytosol | 50.89 | 34.74 |
| CDY07228 | Canola | plastid | 14.59 | 34.15 |
| CDY61605 | Canola | plasma membrane | 33.89 | 33.96 |
| CDY11169 | Canola | plasma membrane | 34.31 | 33.03 |
| CDY68957 | Canola | cytosol, plasma membrane | 14.48 | 32.47 |
| CDY68222 | Canola | plasma membrane | 16.37 | 31.01 |
| CDX81429 | Canola | plasma membrane | 16.37 | 31.01 |
| CDX93101 | Canola | plasma membrane | 15.74 | 30.43 |
| CDY50413 | Canola | plasma membrane | 15.63 | 30.22 |
| CDY22287 | Canola | cytosol | 51.31 | 28.45 |
| CDY54184 | Canola | plasma membrane, vacuole | 13.12 | 28.15 |
| CDX73538 | Canola | cytosol, plasma membrane | 31.9 | 26.41 |
| CDX78191 | Canola | cytosol, plasma membrane | 32.11 | 25.98 |
| CDX80322 | Canola | mitochondrion | 14.9 | 15.73 |
| CDY30856 | Canola | cytosol | 0.73 | 3.26 |
| CDX76198 | Canola | cytosol | 0.73 | 3.26 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.1.8.1 | Gene3D:3.30.200.20 | Gene3D:3.80.10.10 | GO:A0A078JAL6 | UniProt:A0A078JAL6 |
| EnsemblPlants:CDY61244 | ProteinID:CDY61244 | ProteinID:CDY61244.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004672 | GO:GO:0004674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00030749001 |
| InterPro:IPR000719 | InterPro:IPR001611 | InterPro:IPR032675 | InterPro:Kinase-like_dom_sf | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf |
| InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_4 | PFAM:PF00069 | PFAM:PF08263 | PFAM:PF12799 | ScanProsite:PS00107 |
| ScanProsite:PS00108 | PFscan:PS50011 | PFscan:PS51450 | PANTHER:PTHR27003 | PANTHER:PTHR27003:SF134 | InterPro:Prot_kinase_dom |
| InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF52058 | SUPFAM:SSF52075 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS |
| SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0004EE1404 | SEG:seg | : | : |
Description
BnaCnng37500DBnaCnng37500D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JAL6]
Coordinates
chrLK033973:-:34456..40821
Molecular Weight (calculated)
104836.0 Da
IEP (calculated)
5.491
GRAVY (calculated)
-0.150
Length
953 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSRIGAFML LILLCFQFLS VSALTNGFDA SALQALKADW TKYPENWVGA DPCGTNWVGI TCTNDRVVSI SLGNLDVEGK LSSDIASLTE LQILDLSYNT
101: ELTGPLPSNI GQLKKLKNLI LVACSFSGQI PESIGDLEQL IYLSLNLNQF SGRIPASIGR LSNLYWFDIA DNQIEGTIPV SNGTSSPGLD MLLETKHFHF
201: GKNKLSGVIP ETLFSSKMTL IHVLFDGNNF TGDIPDTLSL VKTLTVLRLD RNKLTGNIPT SLNNLTNLQE LYLANNEFTG SLPNLTSLTS LYTLDVSNNT
301: LEFSPIPSWI SSLRSLATLR MEGINLNGSI PNSFFSPPQL QTVILKRNRI NSALDFGTSY SNQLEFVDLQ YNDIDVYTQP SSNTRIQVIL ADNPVCQEMG
401: NSPSYCSAIP HNTSYSTIPT TCSPCDHGRE ASPLCRCAHP FTGTFNFRAP SFSGLFNSTN FEILQKDITG FFNKFSYPVD SVAVRNIREN TTDHQLLIDL
501: LVFPLGRESF NETGMLLVNF AFSNQTYKPP PIFGPYIFIA DPYTQFSDGG GSKSSNMGVI IGAAVGGVVL LLLLTLAGVY ALRQRKRADR ATDQNNPFAK
601: WSTSKSSIDA PQLMGAKSFT FEELKKCTDN FSEANDVGGG GYGKVYRGIL PSGQLIAIKR AQQGSLQGGL EFKTEIELLS RVHHKNVVRL LGFCFDRSEQ
701: MLVYEYIPNG SLRDSLSGKS GIRLDWIRRL RIALGSGKGL AYLHELADPP IIHRDIKSNN ILLDENLTAK VADFGLSKLV GDPEKTHVTT QVKGTMGYLD
801: PEYYMTNQLT EKSDVYGFGV VMLELLTGKS PIEKGKYVVR EVKMKMNKSR SLYDLQELLD TTIIASSSNL KGFEKYVDLA LRCVEEEGVN RPPMGDVVKE
901: IENIMQLAGL NPNGDSASTS ATYEDEIKGS GDPYGKDSFQ YSGNFPASKL EPQ
101: ELTGPLPSNI GQLKKLKNLI LVACSFSGQI PESIGDLEQL IYLSLNLNQF SGRIPASIGR LSNLYWFDIA DNQIEGTIPV SNGTSSPGLD MLLETKHFHF
201: GKNKLSGVIP ETLFSSKMTL IHVLFDGNNF TGDIPDTLSL VKTLTVLRLD RNKLTGNIPT SLNNLTNLQE LYLANNEFTG SLPNLTSLTS LYTLDVSNNT
301: LEFSPIPSWI SSLRSLATLR MEGINLNGSI PNSFFSPPQL QTVILKRNRI NSALDFGTSY SNQLEFVDLQ YNDIDVYTQP SSNTRIQVIL ADNPVCQEMG
401: NSPSYCSAIP HNTSYSTIPT TCSPCDHGRE ASPLCRCAHP FTGTFNFRAP SFSGLFNSTN FEILQKDITG FFNKFSYPVD SVAVRNIREN TTDHQLLIDL
501: LVFPLGRESF NETGMLLVNF AFSNQTYKPP PIFGPYIFIA DPYTQFSDGG GSKSSNMGVI IGAAVGGVVL LLLLTLAGVY ALRQRKRADR ATDQNNPFAK
601: WSTSKSSIDA PQLMGAKSFT FEELKKCTDN FSEANDVGGG GYGKVYRGIL PSGQLIAIKR AQQGSLQGGL EFKTEIELLS RVHHKNVVRL LGFCFDRSEQ
701: MLVYEYIPNG SLRDSLSGKS GIRLDWIRRL RIALGSGKGL AYLHELADPP IIHRDIKSNN ILLDENLTAK VADFGLSKLV GDPEKTHVTT QVKGTMGYLD
801: PEYYMTNQLT EKSDVYGFGV VMLELLTGKS PIEKGKYVVR EVKMKMNKSR SLYDLQELLD TTIIASSSNL KGFEKYVDLA LRCVEEEGVN RPPMGDVVKE
901: IENIMQLAGL NPNGDSASTS ATYEDEIKGS GDPYGKDSFQ YSGNFPASKL EPQ
001: MSSRTGASLL LILFFFQICS VSALTNGLDA SALNALKSEW TTPPDGWEGS DPCGTNWVGI TCQNDRVVSI SLGNLDLEGK LPADISFLSE LRILDLSYNP
101: KLSGPLPPNI GNLGKLRNLI LVGCSFSGQI PESIGTLKEL IYLSLNLNKF SGTIPPSIGL LSKLYWFDIA DNQIEGELPV SNGTSAPGLD MLLQTKHFHF
201: GKNKLSGNIP KELFSSNMSL IHVLFDGNQF TGEIPETLSL VKTLTVLRLD RNKLIGDIPS YLNNLTNLNE LYLANNRFTG TLPNLTSLTS LYTLDVSNNT
301: LDFSPIPSWI SSLPSLSTLR MEGIQLNGPI PISFFSPPQL QTVILKRNSI VESLDFGTDV SSQLEFVDLQ YNEITDYKPS ANKVLQVILA NNPVCLEAGN
401: GPSYCSAIQH NTSFSTLPTN CSPCEPGMEA SPTCRCAYPF MGTLYFRSPS FSGLFNSTNF SILQKAIADF FKKFNYPVDS VGVRNIRENP TDHQLLIDLL
501: VFPLGRESFN QTGMSLVGFA FSNQTYKPPP IFGPYIFKAD LYKQFSDVEV SSKSSNKSIL IGAVVGVVVL LLLLTIAGIY ALRQKKRAER ATGQNNPFAK
601: WDTSKSSIDA PQLMGAKAFT FEELKKCTDN FSEANDVGGG GYGKVYRGIL PNGQLIAIKR AQQGSLQGGL EFKTEIELLS RVHHKNVVRL LGFCFDRNEQ
701: MLVYEYISNG SLKDSLSGKS GIRLDWTRRL KIALGSGKGL AYLHELADPP IIHRDIKSNN ILLDENLTAK VADFGLSKLV GDPEKTHVTT QVKGTMGYLD
801: PEYYMTNQLT EKSDVYGFGV VLLELLTGRS PIERGKYVVR EVKTKMNKSR SLYDLQELLD TTIIASSGNL KGFEKYVDLA LRCVEEEGVN RPSMGEVVKE
901: IENIMQLAGL NPNSDSATSS RTYEDAIKGS GDPYGSESFQ YSGNFPASKL EPQ
101: KLSGPLPPNI GNLGKLRNLI LVGCSFSGQI PESIGTLKEL IYLSLNLNKF SGTIPPSIGL LSKLYWFDIA DNQIEGELPV SNGTSAPGLD MLLQTKHFHF
201: GKNKLSGNIP KELFSSNMSL IHVLFDGNQF TGEIPETLSL VKTLTVLRLD RNKLIGDIPS YLNNLTNLNE LYLANNRFTG TLPNLTSLTS LYTLDVSNNT
301: LDFSPIPSWI SSLPSLSTLR MEGIQLNGPI PISFFSPPQL QTVILKRNSI VESLDFGTDV SSQLEFVDLQ YNEITDYKPS ANKVLQVILA NNPVCLEAGN
401: GPSYCSAIQH NTSFSTLPTN CSPCEPGMEA SPTCRCAYPF MGTLYFRSPS FSGLFNSTNF SILQKAIADF FKKFNYPVDS VGVRNIRENP TDHQLLIDLL
501: VFPLGRESFN QTGMSLVGFA FSNQTYKPPP IFGPYIFKAD LYKQFSDVEV SSKSSNKSIL IGAVVGVVVL LLLLTIAGIY ALRQKKRAER ATGQNNPFAK
601: WDTSKSSIDA PQLMGAKAFT FEELKKCTDN FSEANDVGGG GYGKVYRGIL PNGQLIAIKR AQQGSLQGGL EFKTEIELLS RVHHKNVVRL LGFCFDRNEQ
701: MLVYEYISNG SLKDSLSGKS GIRLDWTRRL KIALGSGKGL AYLHELADPP IIHRDIKSNN ILLDENLTAK VADFGLSKLV GDPEKTHVTT QVKGTMGYLD
801: PEYYMTNQLT EKSDVYGFGV VLLELLTGRS PIERGKYVVR EVKTKMNKSR SLYDLQELLD TTIIASSGNL KGFEKYVDLA LRCVEEEGVN RPSMGEVVKE
901: IENIMQLAGL NPNSDSATSS RTYEDAIKGS GDPYGSESFQ YSGNFPASKL EPQ
Arabidopsis Description
At5g49760 [Source:UniProtKB/TrEMBL;Acc:Q8GZ99]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.