CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
plasma membrane 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plasma membrane, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX73678
CDX92401
CDX95314
CDY06478
CDY23174

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G49760.1	CDX73678	AT3G51920.1	17360592
AT5G49760.1	CDX95314	AT3G51920.1	17360592
AT5G49760.1	CDY23174	AT3G51920.1	17360592
AT5G49760.1	CDY06478	AT4G14640.1	17360592
AT5G49760.1	CDX92401	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH26180	Soybean	cytosol	9.79	79.63
CDY70266	Canola	plasma membrane, plastid	93.39	63.96
Bra000592.1-P	Field mustard	plasma membrane	99.54	52.91
CDX83184	Canola	plasma membrane	99.09	45.65
CDY21455	Canola	plasma membrane	98.86	45.54
CDY21452	Canola	plasma membrane	98.86	45.54
KRH01898	Soybean	plasma membrane	55.81	43.99
CDY61244	Canola	plasma membrane	93.62	43.13
AT5G49760.1	Thale cress	plasma membrane	91.12	41.97
CDY12940	Canola	plasma membrane	81.09	38.24
CDY19539	Canola	plasma membrane	79.73	37.31
CDY12939	Canola	plasma membrane	79.73	37.31
CDX83183	Canola	plasma membrane	64.92	35.1
CDY07228	Canola	plastid	29.16	31.45
CDY68957	Canola	cytosol, plasma membrane	28.7	29.65
KRH30865	Soybean	plasma membrane	61.73	29.11
KRH32710	Soybean	plasma membrane	61.73	29.08
CDY50413	Canola	plasma membrane	28.93	25.76
CDY68222	Canola	plasma membrane	29.39	25.65
CDX81429	Canola	plasma membrane	29.39	25.65
CDX93101	Canola	plasma membrane	28.7	25.56
Solyc01g102680.2.1	Tomato	plasma membrane	54.9	25.1
CDY54184	Canola	plasma membrane, vacuole	25.28	25.0
CDY54882	Canola	plasma membrane	43.51	20.13
CDY10230	Canola	plasma membrane	43.28	19.94
CDY57828	Canola	plasma membrane	39.86	18.54
CDY11171	Canola	plasma membrane	39.86	18.54
CDY61604	Canola	plasma membrane	39.64	18.47
CDY61605	Canola	plasma membrane	39.64	18.3
CDY49740	Canola	cytosol	56.95	17.91
CDY11169	Canola	plasma membrane	39.86	17.68
CDX73538	Canola	cytosol, plasma membrane	38.5	14.68
CDX80322	Canola	mitochondrion	30.07	14.62
CDY22287	Canola	cytosol	56.95	14.54
CDX78191	Canola	cytosol, plasma membrane	38.27	14.26
CDY68959	Canola	endoplasmic reticulum, golgi	0.0	0.0
CDY71822	Canola	cytosol	0.0	0.0
CDX83185	Canola	extracellular	0.0	0.0
CDX76198	Canola	cytosol	0.0	0.0
CDY30856	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.8.1	Gene3D:3.30.200.20	GO:A0A078G9N7	UniProt:A0A078G9N7	EnsemblPlants:CDY21453
ProteinID:CDY21453	ProteinID:CDY21453.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00015857001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27003	PANTHER:PTHR27003:SF134
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix
UniParc:UPI0004EEA6A7	SEG:seg	:	:	:	:

Description

BnaC03g27440DBnaC03g27440D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G9N7]

Coordinates

chrLK032121:+:188480..190161

Molecular Weight (calculated)

48511.1 Da

IEP (calculated)

8.840

GRAVY (calculated)

-0.339

Length

439 amino acids

Sequence
(BLAST)

001: MSLVNFAFSN QIYKPPPRFG PYVFRANPYN QFSDRGGSSS SNMGIIIGAA VGAVVLLLLL TLAGVYALRQ RKRADRATDQ NNPFAKWNTS KSSIDAPQLM
101: GAKAFTFEEL KKCTENFSEA NDVGGGGYGK VYRGILPSGQ LIAIKRAQQG SLQGGLEFKT EIELLSRVHH KNVVRLLGFC FDRSEQMLVY EYIPNGSLRD
201: SLSGKSGIRL DWTRRLKIAL GSGKGLAYLH ELADPPIIHR DIKSNNILLD ENLTAKVADF GLSKIVGDPE KTHVTTQVKG TMGYLDPEYY MTNQLTEKSD
301: VYGFGVVMLE LLTGKSPIER GKYVVREVKT KMNKSRSLYD LQELMDTTII ASSSNLKGFE KYVDLALRCV EEEGVNRPSM GEVVKEIENI MQLAGLNPNV
401: DSASSSRTYE EAIKGSGDPY GKDSFEYSGN FPASKLEPQ

Best Arabidopsis Sequence Match ( AT5G49760.1 )
(BLAST)

001: MSSRTGASLL LILFFFQICS VSALTNGLDA SALNALKSEW TTPPDGWEGS DPCGTNWVGI TCQNDRVVSI SLGNLDLEGK LPADISFLSE LRILDLSYNP
101: KLSGPLPPNI GNLGKLRNLI LVGCSFSGQI PESIGTLKEL IYLSLNLNKF SGTIPPSIGL LSKLYWFDIA DNQIEGELPV SNGTSAPGLD MLLQTKHFHF
201: GKNKLSGNIP KELFSSNMSL IHVLFDGNQF TGEIPETLSL VKTLTVLRLD RNKLIGDIPS YLNNLTNLNE LYLANNRFTG TLPNLTSLTS LYTLDVSNNT
301: LDFSPIPSWI SSLPSLSTLR MEGIQLNGPI PISFFSPPQL QTVILKRNSI VESLDFGTDV SSQLEFVDLQ YNEITDYKPS ANKVLQVILA NNPVCLEAGN
401: GPSYCSAIQH NTSFSTLPTN CSPCEPGMEA SPTCRCAYPF MGTLYFRSPS FSGLFNSTNF SILQKAIADF FKKFNYPVDS VGVRNIRENP TDHQLLIDLL
501: VFPLGRESFN QTGMSLVGFA FSNQTYKPPP IFGPYIFKAD LYKQFSDVEV SSKSSNKSIL IGAVVGVVVL LLLLTIAGIY ALRQKKRAER ATGQNNPFAK
601: WDTSKSSIDA PQLMGAKAFT FEELKKCTDN FSEANDVGGG GYGKVYRGIL PNGQLIAIKR AQQGSLQGGL EFKTEIELLS RVHHKNVVRL LGFCFDRNEQ
701: MLVYEYISNG SLKDSLSGKS GIRLDWTRRL KIALGSGKGL AYLHELADPP IIHRDIKSNN ILLDENLTAK VADFGLSKLV GDPEKTHVTT QVKGTMGYLD
801: PEYYMTNQLT EKSDVYGFGV VLLELLTGRS PIERGKYVVR EVKTKMNKSR SLYDLQELLD TTIIASSGNL KGFEKYVDLA LRCVEEEGVN RPSMGEVVKE
901: IENIMQLAGL NPNSDSATSS RTYEDAIKGS GDPYGSESFQ YSGNFPASKL EPQ

Arabidopsis Description

At5g49760 [Source:UniProtKB/TrEMBL;Acc:Q8GZ99]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.