Factsheet for TraesCS5D01G416100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 3
mitochondrion 2
vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	vacuole
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G308700.1
TraesCS1A01G308800.1
TraesCS1B01G319300.1
TraesCS1D01G308000.1
TraesCS2B01G113800.2
TraesCS3A01G184500.1
TraesCS3A01G191900.1
TraesCS3A01G335000.1
TraesCS3B01G219900.1
TraesCS3B01G365900.1
TraesCS3D01G188600.1
TraesCS3D01G194500.2
TraesCS3D01G328300.1
TraesCS4B01G131100.1
TraesCS4D01G126100.1
TraesCS5A01G057100.1
TraesCS5A01G057200.1
TraesCS5A01G139700.1
TraesCS5A01G382800.2
TraesCS5B01G059900.1
TraesCS5B01G137100.1
TraesCS5D01G068000.1
TraesCS5D01G068100.1
TraesCS5D01G153400.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G02410.1	TraesCS1A01G308700.1	AT2G41090.1	17360592
AT4G02410.1	TraesCS1A01G308800.1	AT2G41090.1	17360592
AT4G02410.1	TraesCS1B01G319300.1	AT2G41090.1	17360592
AT4G02410.1	TraesCS1D01G308000.1	AT2G41090.1	17360592
AT4G02410.1	TraesCS2B01G113800.2	AT2G41090.1	17360592
AT4G02410.1	TraesCS3A01G184500.1	AT2G41090.1	17360592
AT4G02410.1	TraesCS3A01G191900.1	AT2G41090.1	17360592
AT4G02410.1	TraesCS3A01G335000.1	AT2G41090.1	17360592
AT4G02410.1	TraesCS3B01G219900.1	AT2G41090.1	17360592
AT4G02410.1	TraesCS3B01G365900.1	AT2G41090.1	17360592
AT4G02410.1	TraesCS3D01G188600.1	AT2G41090.1	17360592
AT4G02410.1	TraesCS3D01G194500.2	AT2G41090.1	17360592
AT4G02410.1	TraesCS3D01G328300.1	AT2G41090.1	17360592
AT4G02410.1	TraesCS4B01G131100.1	AT2G41090.1	17360592
AT4G02410.1	TraesCS4D01G126100.1	AT2G41090.1	17360592
AT4G02410.1	TraesCS5A01G057100.1	AT2G41090.1	17360592
AT4G02410.1	TraesCS5A01G057200.1	AT2G41090.1	17360592
AT4G02410.1	TraesCS5A01G139700.1	AT2G41090.1	17360592
AT4G02410.1	TraesCS5B01G059900.1	AT2G41090.1	17360592
AT4G02410.1	TraesCS5B01G137100.1	AT2G41090.1	17360592
AT4G02410.1	TraesCS5D01G068000.1	AT2G41090.1	17360592
AT4G02410.1	TraesCS5D01G068100.1	AT2G41090.1	17360592
AT4G02410.1	TraesCS5D01G153400.1	AT2G41090.1	17360592
AT4G02410.1	TraesCS1A01G308700.1	AT2G41100.1	17360592
AT4G02410.1	TraesCS1A01G308800.1	AT2G41100.1	17360592
AT4G02410.1	TraesCS1B01G319300.1	AT2G41100.1	17360592
AT4G02410.1	TraesCS1D01G308000.1	AT2G41100.1	17360592
AT4G02410.1	TraesCS2B01G113800.2	AT2G41100.1	17360592
AT4G02410.1	TraesCS3A01G184500.1	AT2G41100.1	17360592
AT4G02410.1	TraesCS3A01G191900.1	AT2G41100.1	17360592
AT4G02410.1	TraesCS3A01G335000.1	AT2G41100.1	17360592
AT4G02410.1	TraesCS3B01G219900.1	AT2G41100.1	17360592
AT4G02410.1	TraesCS3B01G365900.1	AT2G41100.1	17360592
AT4G02410.1	TraesCS3D01G188600.1	AT2G41100.1	17360592
AT4G02410.1	TraesCS3D01G194500.2	AT2G41100.1	17360592
AT4G02410.1	TraesCS3D01G328300.1	AT2G41100.1	17360592
AT4G02410.1	TraesCS4B01G131100.1	AT2G41100.1	17360592
AT4G02410.1	TraesCS4D01G126100.1	AT2G41100.1	17360592
AT4G02410.1	TraesCS5A01G057100.1	AT2G41100.1	17360592
AT4G02410.1	TraesCS5A01G057200.1	AT2G41100.1	17360592
AT4G02410.1	TraesCS5A01G139700.1	AT2G41100.1	17360592
AT4G02410.1	TraesCS5B01G059900.1	AT2G41100.1	17360592
AT4G02410.1	TraesCS5B01G137100.1	AT2G41100.1	17360592
AT4G02410.1	TraesCS5D01G068000.1	AT2G41100.1	17360592
AT4G02410.1	TraesCS5D01G068100.1	AT2G41100.1	17360592
AT4G02410.1	TraesCS5D01G153400.1	AT2G41100.1	17360592
AT4G02410.1	TraesCS5A01G382800.2	AT4G14640.1	17360592
AT4G02410.1	TraesCS1A01G308700.1	AT5G21274.1	17360592
AT4G02410.1	TraesCS1A01G308800.1	AT5G21274.1	17360592
AT4G02410.1	TraesCS1B01G319300.1	AT5G21274.1	17360592
AT4G02410.1	TraesCS1D01G308000.1	AT5G21274.1	17360592
AT4G02410.1	TraesCS2B01G113800.2	AT5G21274.1	17360592
AT4G02410.1	TraesCS3A01G184500.1	AT5G21274.1	17360592
AT4G02410.1	TraesCS3A01G191900.1	AT5G21274.1	17360592
AT4G02410.1	TraesCS3A01G335000.1	AT5G21274.1	17360592
AT4G02410.1	TraesCS3B01G219900.1	AT5G21274.1	17360592
AT4G02410.1	TraesCS3B01G365900.1	AT5G21274.1	17360592
AT4G02410.1	TraesCS3D01G188600.1	AT5G21274.1	17360592
AT4G02410.1	TraesCS3D01G194500.2	AT5G21274.1	17360592
AT4G02410.1	TraesCS3D01G328300.1	AT5G21274.1	17360592
AT4G02410.1	TraesCS4B01G131100.1	AT5G21274.1	17360592
AT4G02410.1	TraesCS4D01G126100.1	AT5G21274.1	17360592
AT4G02410.1	TraesCS5A01G057100.1	AT5G21274.1	17360592
AT4G02410.1	TraesCS5A01G057200.1	AT5G21274.1	17360592
AT4G02410.1	TraesCS5A01G139700.1	AT5G21274.1	17360592
AT4G02410.1	TraesCS5B01G059900.1	AT5G21274.1	17360592
AT4G02410.1	TraesCS5B01G137100.1	AT5G21274.1	17360592
AT4G02410.1	TraesCS5D01G068000.1	AT5G21274.1	17360592
AT4G02410.1	TraesCS5D01G068100.1	AT5G21274.1	17360592
AT4G02410.1	TraesCS5D01G153400.1	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G410900.1	Wheat	plasma membrane	92.84	74.3
TraesCS5A01G406100.1	Wheat	plasma membrane	89.91	71.85
HORVU5Hr1G098640.1	Barley	plasma membrane	89.54	71.34
Zm00001d034217_P001	Maize	plasma membrane	75.05	60.32
EER93380	Sorghum	plasma membrane	75.41	60.18
TraesCS5D01G489500.1	Wheat	plastid	67.71	57.57
CDX91325	Canola	cytosol, mitochondrion	24.4	50.38
TraesCS2D01G219900.1	Wheat	plasma membrane	60.55	49.11
TraesCS1D01G049000.1	Wheat	plasma membrane	59.27	48.43
TraesCS3D01G104000.1	Wheat	plasma membrane	59.82	48.37
TraesCS2D01G130600.1	Wheat	plasma membrane	58.72	48.05
TraesCS3D01G304400.1	Wheat	plasma membrane	58.9	47.91
TraesCS6D01G191500.1	Wheat	plasma membrane	58.72	47.69
TraesCS3D01G104100.1	Wheat	plasma membrane	58.72	47.69
TraesCS2D01G219800.1	Wheat	plasma membrane	59.27	47.22
TraesCS6D01G191400.1	Wheat	plasma membrane	58.17	47.1
TraesCS2D01G368000.1	Wheat	plasma membrane	58.9	47.07
TraesCS7D01G080600.1	Wheat	plasma membrane	58.35	47.04
TraesCS3D01G304500.1	Wheat	plasma membrane	58.53	46.91
TraesCS6D01G122100.1	Wheat	plasma membrane	58.35	46.83
TraesCS2D01G130500.1	Wheat	plasma membrane	57.43	46.3
TraesCS2D01G201700.1	Wheat	plasma membrane	57.43	46.1
TraesCS2D01G137400.1	Wheat	plasma membrane	46.61	45.68
TraesCS5D01G452900.1	Wheat	mitochondrion, plasma membrane, plastid	59.27	45.17
KRH49145	Soybean	plasma membrane	55.23	45.13
TraesCS6D01G335400.1	Wheat	plasma membrane	56.33	45.01
KRH00016	Soybean	plasma membrane	55.05	44.98
TraesCS2D01G201400.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	55.96	44.92
VIT_08s0007g00810.t01	Wine grape	plasma membrane	55.96	44.85
TraesCS5D01G476000.1	Wheat	plasma membrane	56.88	44.73
TraesCS7D01G080500.1	Wheat	plasma membrane	55.23	44.73
TraesCS6D01G122200.1	Wheat	plasma membrane	56.33	44.69
TraesCS5D01G452800.1	Wheat	mitochondrion	58.9	44.4
TraesCS2D01G129100.1	Wheat	plasma membrane	55.41	44.35
TraesCS2D01G129000.1	Wheat	plasma membrane	55.23	44.01
TraesCS6D01G219000.1	Wheat	plasma membrane	53.76	43.93
AT2G37710.1	Thale cress	plasma membrane	53.76	43.41
CDX91384	Canola	plasma membrane	53.58	43.39
TraesCS5D01G476100.1	Wheat	plasma membrane	42.57	43.2
TraesCS2D01G367900.1	Wheat	plasma membrane, plastid	57.61	43.13
Bra005168.1-P	Field mustard	plasma membrane	53.21	43.09
AT3G53810.1	Thale cress	plasma membrane	53.21	42.84
PGSC0003DMT400022983	Potato	plasma membrane	52.11	42.71
Solyc09g011990.1.1	Tomato	plasma membrane	52.11	42.52
CDY65835	Canola	plasma membrane	51.38	42.49
TraesCS1D01G139700.1	Wheat	plasma membrane, plastid	56.15	42.44
CDY21254	Canola	plasma membrane	50.64	42.4
PGSC0003DMT400022743	Potato	plasma membrane	51.38	41.92
PGSC0003DMT400052365	Potato	plasma membrane	51.01	41.74
Solyc09g012000.1.1	Tomato	plasma membrane	51.19	41.7
Bra035326.1-P	Field mustard	plasma membrane	50.83	41.28
Bra018553.1-P	Field mustard	plasma membrane	49.91	40.78
TraesCS1D01G048900.1	Wheat	plasma membrane	53.03	40.7
CDY02414	Canola	plasma membrane	43.85	40.51
CDY55369	Canola	plasma membrane	49.54	40.3
AT4G02410.1	Thale cress	plasma membrane	49.72	40.21
AT4G02420.1	Thale cress	plasma membrane	48.99	39.91
TraesCS2D01G088500.1	Wheat	plasma membrane	50.28	39.54
CDX90939	Canola	plasma membrane	47.89	39.49
Bra000881.1-P	Field mustard	plasma membrane	48.62	39.26
Bra000880.1-P	Field mustard	plasma membrane	47.89	38.44
TraesCS5D01G091000.1	Wheat	plasma membrane	45.69	35.93
TraesCS4D01G288200.1	Wheat	plasma membrane	42.75	34.67
Solyc09g011060.2.1	Tomato	plasma membrane	50.09	32.81
GSMUA_Achr9P09920_001	Banana	plasma membrane	40.18	23.1
GSMUA_Achr9P10000_001	Banana	cytosol	36.88	10.49

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.19	Gene3D:2.60.120.200	Gene3D:3.30.200.20	InterPro:ConA-like_dom_sf	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0030246	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	InterPro:Legume_lectin_dom	PFAM:PF00069
PFAM:PF00139	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27007	PANTHER:PTHR27007:SF133
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF49899	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:TraesCS5D01G416100	EnsemblPlants:TraesCS5D01G416100.1	TIGR:cd06899	SEG:seg	:	:

Description

No Description!

Coordinates

chr5D:+:478590584..478595773

Molecular Weight (calculated)

60279.3 Da

IEP (calculated)

6.838

GRAVY (calculated)

-0.126

Length

545 amino acids

Sequence
(BLAST)

001: MSCTSYLIRK VLIFPTDGTA VVQPSGLLEL TNGTAQLSSH VVHRTPLRLR RSPGNGVRSF SASFVFGIIP PYSDLSGHGI VFFVGKDNFS AVLPSQYLGL
101: LNSANNGNAT NHIFGVELDA IQSKEFQDPD DNHVVIDVNS LQSIAARHAG YYDDKTGAFH DLLLISGKAM QVWVDYDSGS TQIMLDYGWL KNGAKPSTPL
201: VYAEVREDWE VEFGPHRFTY KDLFRATEGF KNKTLLGFGG FGRVYKGVLP KSKLEVAVKK VSHESRQGIK EFVAEVVTIG RLRHRNMVQL LGYCRRKGEL
301: LLVYDYMSNG SLDKYLYGGS KDKEKTALDW AQRFRIIKGV ASGLPYTHED FEQVIIHRDI KASNVLYDHG ADPQTTHVVG TMGYLAPELA RTGKVSPLTD
401: VFAFGFFILE VACGRRPVEQ AMNDSRLMLV DWVLEHWQKE ALLEVVDARL DGNYDAGEVV LALKLGLMCS HPMPGAWPSM RQVMQYLEGD MPIPELTPTQ
501: MSFSMLALMQ SQGFDSFVLS AASDPSSATN TTMTMGTISG LSGGR

Best Arabidopsis Sequence Match ( AT1G70130.1 )
(BLAST)

001: MSLLLKMLLF SLFFFYMASI SQCSDPTGGQ FSFNGYLYTD GVADLNPDGL FKLITSKTQG GAGQVLYQFP LQFKNSPNGT VSSFSTTFVF AIVAVRKTIA
101: GCGLSFNISP TKGLNSVPNI DHSNHSVSVG FHTAKSDKPD GEDVNLVGIN IDSSKMDRNC SAGYYKDDGR LVNLDIASGK PIQVWIEYNN STKQLDVTMH
201: SIKISKPKIP LLSMRKDLSP YLHEYMYIGF TSVGSPTSSH YILGWSFNNK GAVSDINLSR LPKVPDEDQE RSLSSKILAI SLSISGVTLV IVLILGVMLF
301: LKRKKFLEVI EDWEVQFGPH KFTYKDLFIA TKGFKNSEVL GKGGFGKVFK GILPLSSIPI AVKKISHDSR QGMREFLAEI ATIGRLRHPD LVRLLGYCRR
401: KGELYLVYDF MPKGSLDKFL YNQPNQILDW SQRFNIIKDV ASGLCYLHQQ WVQVIIHRDI KPANILLDEN MNAKLGDFGL AKLCDHGIDS QTSNVAGTFG
501: YISPELSRTG KSSTSSDVFA FGVFMLEITC GRRPIGPRGS PSEMVLTDWV LDCWDSGDIL QVVDEKLGHR YLAEQVTLVL KLGLLCSHPV AATRPSMSSV
601: IQFLDGVATL PHNLLDLVNS RIINEGFDTL GVTTESMEAS SNVSLVMTES FLSSGR

Arabidopsis Description

LECRK52Putative L-type lectin-domain containing receptor kinase V.2 [Source:UniProtKB/Swiss-Prot;Acc:O04533]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.