Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 7
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G160500.1 | Wheat | plasma membrane | 95.29 | 95.15 |
| TraesCS6A01G132400.1 | Wheat | plasma membrane | 94.85 | 92.93 |
| HORVU6Hr1G025340.4 | Barley | plasma membrane | 89.4 | 85.25 |
| EER97932 | Sorghum | plasma membrane | 79.82 | 77.87 |
| TraesCS6D01G191400.1 | Wheat | plasma membrane | 64.51 | 65.08 |
| TraesCS2D01G219900.1 | Wheat | plasma membrane | 64.21 | 64.88 |
| TraesCS3D01G104100.1 | Wheat | plasma membrane | 61.56 | 62.3 |
| TraesCS3D01G104000.1 | Wheat | plasma membrane | 60.53 | 60.98 |
| TraesCS5D01G476100.1 | Wheat | plasma membrane | 48.01 | 60.71 |
| TraesCS3D01G304400.1 | Wheat | plasma membrane | 59.35 | 60.15 |
| TraesCS1D01G049000.1 | Wheat | plasma membrane | 59.06 | 60.12 |
| TraesCS6D01G335400.1 | Wheat | plasma membrane | 60.09 | 59.82 |
| TraesCS2D01G130500.1 | Wheat | plasma membrane | 59.5 | 59.76 |
| TraesCS6D01G191500.1 | Wheat | plasma membrane | 58.76 | 59.46 |
| TraesCS6D01G122200.1 | Wheat | plasma membrane | 59.65 | 58.95 |
| TraesCS2D01G219800.1 | Wheat | plasma membrane | 59.35 | 58.92 |
| TraesCS5D01G416100.1 | Wheat | plastid | 46.83 | 58.35 |
| TraesCS5D01G489500.1 | Wheat | plastid | 55.08 | 58.35 |
| TraesCS3D01G304500.1 | Wheat | plasma membrane | 58.03 | 57.94 |
| TraesCS1D01G048900.1 | Wheat | plasma membrane | 59.06 | 56.48 |
| TraesCS5D01G452800.1 | Wheat | mitochondrion | 60.09 | 56.43 |
| TraesCS2D01G368000.1 | Wheat | plasma membrane | 56.26 | 56.01 |
| TraesCS5D01G452900.1 | Wheat | mitochondrion, plasma membrane, plastid | 58.76 | 55.8 |
| TraesCS2D01G137400.1 | Wheat | plasma membrane | 45.51 | 55.58 |
| TraesCS2D01G130600.1 | Wheat | plasma membrane | 54.34 | 55.41 |
| TraesCS7D01G080500.1 | Wheat | plasma membrane | 54.49 | 54.98 |
| TraesCS7D01G080600.1 | Wheat | plasma membrane | 54.64 | 54.88 |
| TraesCS2D01G201400.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 54.79 | 54.79 |
| TraesCS2D01G201700.1 | Wheat | plasma membrane | 54.64 | 54.64 |
| TraesCS5D01G476000.1 | Wheat | plasma membrane | 55.52 | 54.4 |
| TraesCS2D01G129000.1 | Wheat | plasma membrane | 54.49 | 54.09 |
| TraesCS6D01G219000.1 | Wheat | plasma membrane | 53.02 | 53.97 |
| TraesCS2D01G367900.1 | Wheat | plasma membrane, plastid | 57.29 | 53.43 |
| KRH49145 | Soybean | plasma membrane | 52.43 | 53.37 |
| TraesCS2D01G129100.1 | Wheat | plasma membrane | 53.46 | 53.3 |
| KRH00016 | Soybean | plasma membrane | 51.99 | 52.92 |
| Bra005168.1-P | Field mustard | plasma membrane | 52.28 | 52.75 |
| AT2G37710.1 | Thale cress | plasma membrane | 52.43 | 52.74 |
| TraesCS1D01G139700.1 | Wheat | plasma membrane, plastid | 55.96 | 52.7 |
| PGSC0003DMT400022983 | Potato | plasma membrane | 51.55 | 52.63 |
| VIT_08s0007g00810.t01 | Wine grape | plasma membrane | 52.58 | 52.5 |
| CDX91384 | Canola | plasma membrane | 51.99 | 52.45 |
| CDX91325 | Canola | cytosol, mitochondrion | 20.03 | 51.52 |
| Solyc09g011990.1.1 | Tomato | plasma membrane | 50.52 | 51.35 |
| PGSC0003DMT400052365 | Potato | plasma membrane | 50.22 | 51.2 |
| CDY21254 | Canola | plasma membrane | 48.9 | 51.0 |
| CDY65835 | Canola | plasma membrane | 49.04 | 50.53 |
| Solyc09g012000.1.1 | Tomato | plasma membrane | 49.78 | 50.52 |
| AT3G53810.1 | Thale cress | plasma membrane | 50.22 | 50.37 |
| PGSC0003DMT400022743 | Potato | plasma membrane | 48.75 | 49.55 |
| Bra035326.1-P | Field mustard | plasma membrane | 48.9 | 49.48 |
| CDY02414 | Canola | plasma membrane | 42.27 | 48.64 |
| TraesCS2D01G088500.1 | Wheat | plasma membrane | 49.63 | 48.63 |
| Bra000881.1-P | Field mustard | plasma membrane | 47.86 | 48.15 |
| Bra018553.1-P | Field mustard | plasma membrane | 47.28 | 48.13 |
| CDX90939 | Canola | plasma membrane | 46.83 | 48.11 |
| AT4G02410.1 | Thale cress | plasma membrane | 47.57 | 47.92 |
| AT4G02420.1 | Thale cress | plasma membrane | 47.13 | 47.83 |
| CDY55369 | Canola | plasma membrane | 46.54 | 47.16 |
| Bra000880.1-P | Field mustard | plasma membrane | 45.51 | 45.51 |
| TraesCS5D01G091000.1 | Wheat | plasma membrane | 45.8 | 44.88 |
| TraesCS4D01G288200.1 | Wheat | plasma membrane | 43.74 | 44.2 |
| Solyc09g011060.2.1 | Tomato | plasma membrane | 48.9 | 39.9 |
| GSMUA_Achr9P09920_001 | Banana | plasma membrane | 39.76 | 28.48 |
| GSMUA_Achr9P10000_001 | Banana | cytosol | 40.5 | 14.35 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.1.19 | Gene3D:2.60.120.200 | Gene3D:3.30.200.20 | InterPro:ConA-like_dom_sf | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 |
| GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 |
| GO:GO:0019538 | GO:GO:0030246 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | InterPro:Legume_lectin_dom | PFAM:PF00069 |
| PFAM:PF00139 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR27007 | PANTHER:PTHR27007:SF28 |
| InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF49899 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS |
| SignalP:SignalP-noTM | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS6D01G122100 | EnsemblPlants:TraesCS6D01G122100.1 | TIGR:cd06899 | TIGR:cd14066 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr6D:+:86721333..86723372
Molecular Weight (calculated)
74531.4 Da
IEP (calculated)
6.241
GRAVY (calculated)
-0.029
Length
679 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAKKLVLLR LLLVGFIINH VARSAGAGDD DHQFVYSGFA GSSSLLLDGA ASVTGSGLLE LTNGTLRQKG HAIYPTPLRL RGRSFSSSFV FGILSAYPDV
101: SANGIALFVA PTADFSGAMA AQYLGLLNSS NNGNATNRVF AVELDTMQNN EFRDLSDNHV GIDINSLVSV NSTDAGYYDD DGSGSGEFRN LTLISHEAMQ
201: VWVDYEGGTG RINVTLAPLK TRRPARPLLS VVQDLSEVIP DTAYIGFSSS TGLVSSRHYI LGWSFAVDGP APAIDIARLP KLPREFPKPR SKAMEVILPI
301: VTAAVVLLVG TALVLLRRTQ LRYSELREEW EVEFGPHRFS YKDLFRATEG FKNKNLLGVG GFGKVYRGVL PASKCEIAVK RVSHSSKQGM KEFVAEIVSI
401: GRMQHPNLVR LLGYCRRQGE LLLVYEYMPN GSLDRYLYSQ PQEADDKHNG TLNWVQRLGI IKGIASGLIY LHDEWEKVVV HRDIKASNVL LDSGMNGRLG
501: DFGLAMLYDH TADPETSHVV GTIGYLAPEI GRTSKATILT DVFAFGIFVL EVTCGQKPIM QDSKDDQLML ADWVVEHWNR GSLVETVDSK LQGDYDADEA
601: CVVLKVGLLC SHPFPEARPT MRQVLQYLNG DMPVPELVPA HLSLQMLAFM QNEGFDSYIM SYPSSVESVN SLTSLVHER
101: SANGIALFVA PTADFSGAMA AQYLGLLNSS NNGNATNRVF AVELDTMQNN EFRDLSDNHV GIDINSLVSV NSTDAGYYDD DGSGSGEFRN LTLISHEAMQ
201: VWVDYEGGTG RINVTLAPLK TRRPARPLLS VVQDLSEVIP DTAYIGFSSS TGLVSSRHYI LGWSFAVDGP APAIDIARLP KLPREFPKPR SKAMEVILPI
301: VTAAVVLLVG TALVLLRRTQ LRYSELREEW EVEFGPHRFS YKDLFRATEG FKNKNLLGVG GFGKVYRGVL PASKCEIAVK RVSHSSKQGM KEFVAEIVSI
401: GRMQHPNLVR LLGYCRRQGE LLLVYEYMPN GSLDRYLYSQ PQEADDKHNG TLNWVQRLGI IKGIASGLIY LHDEWEKVVV HRDIKASNVL LDSGMNGRLG
501: DFGLAMLYDH TADPETSHVV GTIGYLAPEI GRTSKATILT DVFAFGIFVL EVTCGQKPIM QDSKDDQLML ADWVVEHWNR GSLVETVDSK LQGDYDADEA
601: CVVLKVGLLC SHPFPEARPT MRQVLQYLNG DMPVPELVPA HLSLQMLAFM QNEGFDSYIM SYPSSVESVN SLTSLVHER
001: MFLKLLTIFF FFFFNLIFQS SSQSLNFAYN NGFNPPTDLS IQGITTVTPN GLLKLTNTTV QKTGHAFYTK PIRFKDSPNG TVSSFSTSFV FAIHSQIAIL
101: SGHGIAFVVA PNASLPYGNP SQYIGLFNLA NNGNETNHVF AVELDTILST EFNDTNDNHV GIDINSLKSV QSSPAGYWDE KGQFKNLTLI SRKPMQVWVD
201: YDGRTNKIDV TMAPFNEDKP TRPLVTAVRD LSSVLLQDMY VGFSSATGSV LSEHYILGWS FGLNEKAPPL ALSRLPKLPR FEPKRISEFY KIGMPLISLF
301: LIFSFIFLVC YIVRRRRKFA EELEEWEKEF GKNRFRFKDL YYATKGFKEK GLLGTGGFGS VYKGVMPGTK LEIAVKRVSH ESRQGMKEFV AEIVSIGRMS
401: HRNLVPLLGY CRRRGELLLV YDYMPNGSLD KYLYNTPEVT LNWKQRIKVI LGVASGLFYL HEEWEQVVIH RDVKASNVLL DGELNGRLGD FGLARLYDHG
501: SDPQTTHVVG TLGYLAPEHT RTGRATMATD VFAFGAFLLE VACGRRPIEF QQETDETFLL VDWVFGLWNK GDILAAKDPN MGSECDEKEV EMVLKLGLLC
601: SHSDPRARPS MRQVLHYLRG DAKLPELSPL DLSGSGMMFG VHDGFSELGM SYSSSVFKGF TGGSSIADSQ LSGGR
101: SGHGIAFVVA PNASLPYGNP SQYIGLFNLA NNGNETNHVF AVELDTILST EFNDTNDNHV GIDINSLKSV QSSPAGYWDE KGQFKNLTLI SRKPMQVWVD
201: YDGRTNKIDV TMAPFNEDKP TRPLVTAVRD LSSVLLQDMY VGFSSATGSV LSEHYILGWS FGLNEKAPPL ALSRLPKLPR FEPKRISEFY KIGMPLISLF
301: LIFSFIFLVC YIVRRRRKFA EELEEWEKEF GKNRFRFKDL YYATKGFKEK GLLGTGGFGS VYKGVMPGTK LEIAVKRVSH ESRQGMKEFV AEIVSIGRMS
401: HRNLVPLLGY CRRRGELLLV YDYMPNGSLD KYLYNTPEVT LNWKQRIKVI LGVASGLFYL HEEWEQVVIH RDVKASNVLL DGELNGRLGD FGLARLYDHG
501: SDPQTTHVVG TLGYLAPEHT RTGRATMATD VFAFGAFLLE VACGRRPIEF QQETDETFLL VDWVFGLWNK GDILAAKDPN MGSECDEKEV EMVLKLGLLC
601: SHSDPRARPS MRQVLHYLRG DAKLPELSPL DLSGSGMMFG VHDGFSELGM SYSSSVFKGF TGGSSIADSQ LSGGR
Arabidopsis Description
LECRK41L-type lectin-domain containing receptor kinase IV.1 [Source:UniProtKB/Swiss-Prot;Acc:O80939]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.