Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 7
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G410900.1 | Wheat | plasma membrane | 94.72 | 94.86 |
| HORVU5Hr1G098640.1 | Barley | plasma membrane | 92.67 | 92.4 |
| TraesCS5D01G416100.1 | Wheat | plastid | 71.85 | 89.91 |
| Os03t0772600-01 | Rice | plasma membrane | 53.52 | 77.66 |
| EER93380 | Sorghum | plasma membrane | 77.42 | 77.31 |
| Zm00001d034217_P001 | Maize | plasma membrane | 76.25 | 76.7 |
| TraesCS2A01G186500.1 | Wheat | cytosol | 29.03 | 66.22 |
| TraesCS6A01G352600.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 45.31 | 64.38 |
| TraesCS3A01G297800.1 | Wheat | plasma membrane | 38.27 | 64.13 |
| TraesCS2A01G126300.1 | Wheat | cytosol | 22.73 | 62.5 |
| TraesCS7A01G085400.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 43.99 | 62.5 |
| TraesCS7A01G085500.1 | Wheat | cytosol | 43.7 | 62.08 |
| TraesCS1A01G048100.1 | Wheat | plasma membrane | 60.41 | 61.77 |
| TraesCS2A01G214100.1 | Wheat | plasma membrane | 60.85 | 61.76 |
| TraesCS3A01G101800.1 | Wheat | plasma membrane | 60.85 | 61.76 |
| TraesCS2A01G126600.1 | Wheat | plasma membrane | 39.74 | 61.45 |
| TraesCS2A01G214000.1 | Wheat | plasma membrane | 61.14 | 61.23 |
| TraesCS2A01G371700.1 | Wheat | plasma membrane | 60.56 | 61.0 |
| TraesCS3A01G101700.1 | Wheat | plasma membrane | 60.12 | 60.83 |
| TraesCS6A01G132400.1 | Wheat | plasma membrane | 60.85 | 59.88 |
| TraesCS2A01G371600.1 | Wheat | plasma membrane | 59.38 | 59.73 |
| TraesCS2A01G127900.1 | Wheat | plasma membrane | 58.36 | 59.67 |
| TraesCS5A01G463300.1 | Wheat | plasma membrane | 58.65 | 59.44 |
| TraesCS4A01G384500.1 | Wheat | plasma membrane | 58.8 | 59.32 |
| TraesCS2A01G186100.1 | Wheat | plasma membrane | 46.33 | 59.07 |
| TraesCS6A01G352800.1 | Wheat | plasma membrane | 58.65 | 58.91 |
| TraesCS2A01G186200.1 | Wheat | plasma membrane | 58.06 | 58.49 |
| TraesCS2A01G128000.1 | Wheat | plasma membrane | 58.65 | 58.31 |
| TraesCS6A01G236300.1 | Wheat | plasma membrane | 50.73 | 58.25 |
| TraesCS7A01G085600.1 | Wheat | plasma membrane | 57.48 | 58.25 |
| TraesCS1A01G048000.1 | Wheat | plasma membrane | 57.04 | 58.15 |
| TraesCS6A01G352900.1 | Wheat | plasma membrane | 57.77 | 58.03 |
| TraesCS6A01G132300.1 | Wheat | plasma membrane | 57.77 | 57.52 |
| TraesCS6A01G352700.1 | Wheat | plasma membrane | 57.33 | 57.42 |
| CDX91325 | Canola | cytosol, mitochondrion | 22.14 | 57.2 |
| VIT_08s0007g00810.t01 | Wine grape | plasma membrane | 55.72 | 55.88 |
| TraesCS2A01G126500.1 | Wheat | plasma membrane | 55.87 | 55.78 |
| KRH49145 | Soybean | plasma membrane | 54.11 | 55.32 |
| KRH00016 | Soybean | plasma membrane | 54.11 | 55.32 |
| CDX91384 | Canola | plasma membrane | 53.37 | 54.09 |
| AT2G37710.1 | Thale cress | plasma membrane | 53.52 | 54.07 |
| Bra005168.1-P | Field mustard | plasma membrane | 52.93 | 53.64 |
| PGSC0003DMT400022983 | Potato | plasma membrane | 52.2 | 53.53 |
| Solyc09g011990.1.1 | Tomato | plasma membrane | 51.47 | 52.54 |
| TraesCS7A01G139900.1 | Wheat | vacuole | 35.34 | 52.51 |
| AT3G53810.1 | Thale cress | plasma membrane | 52.05 | 52.44 |
| PGSC0003DMT400052365 | Potato | plasma membrane | 51.17 | 52.4 |
| CDY21254 | Canola | plasma membrane | 49.85 | 52.23 |
| PGSC0003DMT400022743 | Potato | plasma membrane | 50.88 | 51.95 |
| CDY65835 | Canola | plasma membrane | 50.15 | 51.9 |
| Solyc09g012000.1.1 | Tomato | plasma membrane | 50.88 | 51.87 |
| Bra035326.1-P | Field mustard | plasma membrane | 50.0 | 50.82 |
| Bra018553.1-P | Field mustard | plasma membrane | 49.41 | 50.52 |
| CDY02414 | Canola | plasma membrane | 43.11 | 49.83 |
| CDY55369 | Canola | plasma membrane | 48.53 | 49.4 |
| AT4G02410.1 | Thale cress | plasma membrane | 48.68 | 49.26 |
| AT4G02420.1 | Thale cress | plasma membrane | 48.24 | 49.18 |
| CDX90939 | Canola | plasma membrane | 46.92 | 48.41 |
| TraesCS5A01G484600.1 | Wheat | plasma membrane | 48.83 | 48.4 |
| Bra000881.1-P | Field mustard | plasma membrane | 47.8 | 48.3 |
| TraesCS5A01G484300.1 | Wheat | plasma membrane | 47.36 | 46.68 |
| Bra000880.1-P | Field mustard | plasma membrane | 46.33 | 46.54 |
| TraesCS5A01G081600.1 | Wheat | plasma membrane | 45.89 | 45.04 |
| TraesCS1A01G184400.1 | Wheat | plasma membrane | 43.26 | 43.51 |
| Solyc09g011060.2.1 | Tomato | plasma membrane | 49.85 | 40.87 |
| GSMUA_Achr9P09920_001 | Banana | plasma membrane | 40.18 | 28.9 |
| GSMUA_Achr9P10000_001 | Banana | cytosol | 40.76 | 14.5 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.1.19 | Gene3D:2.60.120.200 | Gene3D:3.30.200.20 | InterPro:ConA-like_dom_sf | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 |
| GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 |
| GO:GO:0019538 | GO:GO:0030246 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | InterPro:Legume_lectin_dom | PFAM:PF00069 |
| PFAM:PF00139 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR27007 | PANTHER:PTHR27007:SF133 |
| InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF49899 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS |
| SignalP:SignalP-noTM | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS5A01G406100 | EnsemblPlants:TraesCS5A01G406100.1 | TIGR:cd06899 | TIGR:cd14066 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr5A:-:597686122..597688341
Molecular Weight (calculated)
74049.0 Da
IEP (calculated)
6.801
GRAVY (calculated)
0.009
Length
682 amino acids
Sequence
(BLAST)
(BLAST)
001: MDNLRSLLAA LLLVCFGFGA GVLGDGDGEQ FVYSGFAGAN ATLALDGTAL VQPSGLLELT NGTAQLSSHA VHRTPLRLRR SPGDAVRSFS ASFVFGIIPP
101: YSDLSGHGIV FFVGKDNFSA ALPSQYLGLL NSANNGNATN QIFGVELDTI QSTEFNDTND NHVGIDVNSL KSVAAHSAGY YDDETGAFNE LLLISGKAMQ
201: VWVDYESDST QISVFLAPLK NGAKPSTPLV SAKSNLSKVL VEPAYAGFSS STGTVRSRHY LLGWSFAMDG PAPPIDIGSL PKLPFVGAKP RSKVPDIVLP
301: IATAAFVLGV VAVVILLVRR RSRYAEVREE WEVEFGPHRF TYKDLFRATE GFKNKTLLGF GGFGRVYKGA LPKSKLEVAV KKVSHESRQG IKEFVAEVVT
401: IGRLRHRNLV QLLGYCRRKG ELLLVYDYMS NGSLDKYLYS GSKEKPALDW AQRFRIIKGV ASGLLYIHED FEQVIIHRDI KASNVLLDAD MNGRLGDFGL
501: ARLYDHGADP QTTHVVGTMG YLAPELARTG KASPLTDVFA FGAFILEVAC GRRPVEQAMN DSRLMLVDWV LEHWQKESLL EVVDARLDGN YDAGEVVLAL
601: KLGLMCSHPM PGARPSMRQV MQYLEGDMPI PELTPTQMSF SMLALMQSQG FDSFVLSATS DPSSATNTMM TMGTISGLSG GR
101: YSDLSGHGIV FFVGKDNFSA ALPSQYLGLL NSANNGNATN QIFGVELDTI QSTEFNDTND NHVGIDVNSL KSVAAHSAGY YDDETGAFNE LLLISGKAMQ
201: VWVDYESDST QISVFLAPLK NGAKPSTPLV SAKSNLSKVL VEPAYAGFSS STGTVRSRHY LLGWSFAMDG PAPPIDIGSL PKLPFVGAKP RSKVPDIVLP
301: IATAAFVLGV VAVVILLVRR RSRYAEVREE WEVEFGPHRF TYKDLFRATE GFKNKTLLGF GGFGRVYKGA LPKSKLEVAV KKVSHESRQG IKEFVAEVVT
401: IGRLRHRNLV QLLGYCRRKG ELLLVYDYMS NGSLDKYLYS GSKEKPALDW AQRFRIIKGV ASGLLYIHED FEQVIIHRDI KASNVLLDAD MNGRLGDFGL
501: ARLYDHGADP QTTHVVGTMG YLAPELARTG KASPLTDVFA FGAFILEVAC GRRPVEQAMN DSRLMLVDWV LEHWQKESLL EVVDARLDGN YDAGEVVLAL
601: KLGLMCSHPM PGARPSMRQV MQYLEGDMPI PELTPTQMSF SMLALMQSQG FDSFVLSATS DPSSATNTMM TMGTISGLSG GR
001: MFVKLKLIFF FFLLCQIMIS SSQNLNFTYN GFHPPLTDIS LQGLATVTPN GLLKLTNTSV QKTGHAFCTE RIRFKDSQNG NVSSFSTTFV FAIHSQIPTL
101: SGHGIAFVVA PTLGLPFALP SQYIGLFNIS NNGNDTNHIF AVEFDTIQSS EFGDPNDNHV GIDLNGLRSA NYSTAGYRDD HDKFQNLSLI SRKRIQVWID
201: YDNRSHRIDV TVAPFDSDKP RKPLVSYVRD LSSILLEDMY VGFSSATGSV LSEHFLVGWS FRLNGEAPML SLSKLPKLPR FEPRRISEFY KIGMPLISLS
301: LIFSIIFLAF YIVRRKKKYE EELDDWETEF GKNRFRFKEL YHATKGFKEK DLLGSGGFGR VYRGILPTTK LEVAVKRVSH DSKQGMKEFV AEIVSIGRMS
401: HRNLVPLLGY CRRRGELLLV YDYMPNGSLD KYLYNNPETT LDWKQRSTII KGVASGLFYL HEEWEQVVIH RDVKASNVLL DADFNGRLGD FGLARLYDHG
501: SDPQTTHVVG TLGYLAPEHS RTGRATTTTD VYAFGAFLLE VVSGRRPIEF HSASDDTFLL VEWVFSLWLR GNIMEAKDPK LGSSGYDLEE VEMVLKLGLL
601: CSHSDPRARP SMRQVLQYLR GDMALPELTP LDLSAGSVMN LGGRDGFSGI AMTDFSTVFK GFTGGSSIAD SLLSGGR
101: SGHGIAFVVA PTLGLPFALP SQYIGLFNIS NNGNDTNHIF AVEFDTIQSS EFGDPNDNHV GIDLNGLRSA NYSTAGYRDD HDKFQNLSLI SRKRIQVWID
201: YDNRSHRIDV TVAPFDSDKP RKPLVSYVRD LSSILLEDMY VGFSSATGSV LSEHFLVGWS FRLNGEAPML SLSKLPKLPR FEPRRISEFY KIGMPLISLS
301: LIFSIIFLAF YIVRRKKKYE EELDDWETEF GKNRFRFKEL YHATKGFKEK DLLGSGGFGR VYRGILPTTK LEVAVKRVSH DSKQGMKEFV AEIVSIGRMS
401: HRNLVPLLGY CRRRGELLLV YDYMPNGSLD KYLYNNPETT LDWKQRSTII KGVASGLFYL HEEWEQVVIH RDVKASNVLL DADFNGRLGD FGLARLYDHG
501: SDPQTTHVVG TLGYLAPEHS RTGRATTTTD VYAFGAFLLE VVSGRRPIEF HSASDDTFLL VEWVFSLWLR GNIMEAKDPK LGSSGYDLEE VEMVLKLGLL
601: CSHSDPRARP SMRQVLQYLR GDMALPELTP LDLSAGSVMN LGGRDGFSGI AMTDFSTVFK GFTGGSSIAD SLLSGGR
Arabidopsis Description
LECRK42L-type lectin-domain containing receptor kinase IV.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M345]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.