Factsheet for TraesCS6A01G352600.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
endoplasmic reticulum 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, plasma membrane
Any Predictor:	cytosol, endoplasmic reticulum, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G308700.1
TraesCS1A01G308800.1
TraesCS1B01G319300.1
TraesCS1D01G308000.1
TraesCS2B01G113800.2
TraesCS3A01G184500.1
TraesCS3A01G191900.1
TraesCS3A01G335000.1
TraesCS3B01G219900.1
TraesCS3B01G365900.1
TraesCS3D01G188600.1
TraesCS3D01G194500.2
TraesCS3D01G328300.1
TraesCS4B01G131100.1
TraesCS4D01G126100.1
TraesCS5A01G057100.1
TraesCS5A01G057200.1
TraesCS5A01G139700.1
TraesCS5A01G382800.2
TraesCS5B01G059900.1
TraesCS5B01G137100.1
TraesCS5D01G068000.1
TraesCS5D01G068100.1
TraesCS5D01G153400.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G02410.1	TraesCS1A01G308700.1	AT2G41090.1	17360592
AT4G02410.1	TraesCS1A01G308800.1	AT2G41090.1	17360592
AT4G02410.1	TraesCS1B01G319300.1	AT2G41090.1	17360592
AT4G02410.1	TraesCS1D01G308000.1	AT2G41090.1	17360592
AT4G02410.1	TraesCS2B01G113800.2	AT2G41090.1	17360592
AT4G02410.1	TraesCS3A01G184500.1	AT2G41090.1	17360592
AT4G02410.1	TraesCS3A01G191900.1	AT2G41090.1	17360592
AT4G02410.1	TraesCS3A01G335000.1	AT2G41090.1	17360592
AT4G02410.1	TraesCS3B01G219900.1	AT2G41090.1	17360592
AT4G02410.1	TraesCS3B01G365900.1	AT2G41090.1	17360592
AT4G02410.1	TraesCS3D01G188600.1	AT2G41090.1	17360592
AT4G02410.1	TraesCS3D01G194500.2	AT2G41090.1	17360592
AT4G02410.1	TraesCS3D01G328300.1	AT2G41090.1	17360592
AT4G02410.1	TraesCS4B01G131100.1	AT2G41090.1	17360592
AT4G02410.1	TraesCS4D01G126100.1	AT2G41090.1	17360592
AT4G02410.1	TraesCS5A01G057100.1	AT2G41090.1	17360592
AT4G02410.1	TraesCS5A01G057200.1	AT2G41090.1	17360592
AT4G02410.1	TraesCS5A01G139700.1	AT2G41090.1	17360592
AT4G02410.1	TraesCS5B01G059900.1	AT2G41090.1	17360592
AT4G02410.1	TraesCS5B01G137100.1	AT2G41090.1	17360592
AT4G02410.1	TraesCS5D01G068000.1	AT2G41090.1	17360592
AT4G02410.1	TraesCS5D01G068100.1	AT2G41090.1	17360592
AT4G02410.1	TraesCS5D01G153400.1	AT2G41090.1	17360592
AT4G02410.1	TraesCS1A01G308700.1	AT2G41100.1	17360592
AT4G02410.1	TraesCS1A01G308800.1	AT2G41100.1	17360592
AT4G02410.1	TraesCS1B01G319300.1	AT2G41100.1	17360592
AT4G02410.1	TraesCS1D01G308000.1	AT2G41100.1	17360592
AT4G02410.1	TraesCS2B01G113800.2	AT2G41100.1	17360592
AT4G02410.1	TraesCS3A01G184500.1	AT2G41100.1	17360592
AT4G02410.1	TraesCS3A01G191900.1	AT2G41100.1	17360592
AT4G02410.1	TraesCS3A01G335000.1	AT2G41100.1	17360592
AT4G02410.1	TraesCS3B01G219900.1	AT2G41100.1	17360592
AT4G02410.1	TraesCS3B01G365900.1	AT2G41100.1	17360592
AT4G02410.1	TraesCS3D01G188600.1	AT2G41100.1	17360592
AT4G02410.1	TraesCS3D01G194500.2	AT2G41100.1	17360592
AT4G02410.1	TraesCS3D01G328300.1	AT2G41100.1	17360592
AT4G02410.1	TraesCS4B01G131100.1	AT2G41100.1	17360592
AT4G02410.1	TraesCS4D01G126100.1	AT2G41100.1	17360592
AT4G02410.1	TraesCS5A01G057100.1	AT2G41100.1	17360592
AT4G02410.1	TraesCS5A01G057200.1	AT2G41100.1	17360592
AT4G02410.1	TraesCS5A01G139700.1	AT2G41100.1	17360592
AT4G02410.1	TraesCS5B01G059900.1	AT2G41100.1	17360592
AT4G02410.1	TraesCS5B01G137100.1	AT2G41100.1	17360592
AT4G02410.1	TraesCS5D01G068000.1	AT2G41100.1	17360592
AT4G02410.1	TraesCS5D01G068100.1	AT2G41100.1	17360592
AT4G02410.1	TraesCS5D01G153400.1	AT2G41100.1	17360592
AT4G02410.1	TraesCS5A01G382800.2	AT4G14640.1	17360592
AT4G02410.1	TraesCS1A01G308700.1	AT5G21274.1	17360592
AT4G02410.1	TraesCS1A01G308800.1	AT5G21274.1	17360592
AT4G02410.1	TraesCS1B01G319300.1	AT5G21274.1	17360592
AT4G02410.1	TraesCS1D01G308000.1	AT5G21274.1	17360592
AT4G02410.1	TraesCS2B01G113800.2	AT5G21274.1	17360592
AT4G02410.1	TraesCS3A01G184500.1	AT5G21274.1	17360592
AT4G02410.1	TraesCS3A01G191900.1	AT5G21274.1	17360592
AT4G02410.1	TraesCS3A01G335000.1	AT5G21274.1	17360592
AT4G02410.1	TraesCS3B01G219900.1	AT5G21274.1	17360592
AT4G02410.1	TraesCS3B01G365900.1	AT5G21274.1	17360592
AT4G02410.1	TraesCS3D01G188600.1	AT5G21274.1	17360592
AT4G02410.1	TraesCS3D01G194500.2	AT5G21274.1	17360592
AT4G02410.1	TraesCS3D01G328300.1	AT5G21274.1	17360592
AT4G02410.1	TraesCS4B01G131100.1	AT5G21274.1	17360592
AT4G02410.1	TraesCS4D01G126100.1	AT5G21274.1	17360592
AT4G02410.1	TraesCS5A01G057100.1	AT5G21274.1	17360592
AT4G02410.1	TraesCS5A01G057200.1	AT5G21274.1	17360592
AT4G02410.1	TraesCS5A01G139700.1	AT5G21274.1	17360592
AT4G02410.1	TraesCS5B01G059900.1	AT5G21274.1	17360592
AT4G02410.1	TraesCS5B01G137100.1	AT5G21274.1	17360592
AT4G02410.1	TraesCS5D01G068000.1	AT5G21274.1	17360592
AT4G02410.1	TraesCS5D01G068100.1	AT5G21274.1	17360592
AT4G02410.1	TraesCS5D01G153400.1	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G297800.1	Wheat	plasma membrane	53.75	63.39
TraesCS2A01G186500.1	Wheat	cytosol	39.38	63.21
TraesCS7A01G085400.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	60.0	60.0
TraesCS7A01G085500.1	Wheat	cytosol	59.38	59.38
TraesCS2A01G126300.1	Wheat	cytosol	30.42	58.87
TraesCS2A01G126600.1	Wheat	plasma membrane	51.25	55.78
KXG24408	Sorghum	plasma membrane	72.92	52.79
CDX91325	Canola	cytosol, mitochondrion	28.96	52.65
TraesCS5D01G476000.1	Wheat	plasma membrane	73.33	50.79
TraesCS3A01G101800.1	Wheat	plasma membrane	66.25	47.32
TraesCS1A01G048100.1	Wheat	plasma membrane	65.21	46.93
TraesCS2A01G214000.1	Wheat	plasma membrane	65.21	45.96
TraesCS2A01G214100.1	Wheat	plasma membrane	63.75	45.54
TraesCS5A01G406100.1	Wheat	plasma membrane	64.38	45.31
TraesCS2A01G127900.1	Wheat	plasma membrane	62.92	45.28
TraesCS2A01G128000.1	Wheat	plasma membrane	63.75	44.61
TraesCS5A01G463300.1	Wheat	plasma membrane	62.5	44.58
TraesCS3A01G101700.1	Wheat	plasma membrane	61.88	44.07
TraesCS6A01G132300.1	Wheat	plasma membrane	62.29	43.65
TraesCS6A01G352800.1	Wheat	plasma membrane	61.67	43.59
TraesCS6A01G132400.1	Wheat	plasma membrane	61.88	42.86
TraesCS6A01G352900.1	Wheat	plasma membrane	60.62	42.86
TraesCS2A01G371600.1	Wheat	plasma membrane	60.42	42.77
TraesCS1A01G048000.1	Wheat	plasma membrane	59.58	42.75
TraesCS6A01G352700.1	Wheat	plasma membrane	60.42	42.58
TraesCS2A01G371700.1	Wheat	plasma membrane	60.0	42.54
TraesCS2A01G186200.1	Wheat	plasma membrane	60.0	42.54
TraesCS4A01G384500.1	Wheat	plasma membrane	59.17	42.01
TraesCS7A01G085600.1	Wheat	plasma membrane	57.5	41.01
VIT_08s0007g00810.t01	Wine grape	plasma membrane	56.88	40.15
TraesCS2A01G126500.1	Wheat	plasma membrane	57.08	40.12
TraesCS6A01G236300.1	Wheat	plasma membrane	49.58	40.07
KRH00016	Soybean	plasma membrane	55.21	39.73
CDX91384	Canola	plasma membrane	55.62	39.67
PGSC0003DMT400022983	Potato	plasma membrane	54.79	39.55
Bra005168.1-P	Field mustard	plasma membrane	55.42	39.52
TraesCS2A01G186100.1	Wheat	plasma membrane	43.96	39.44
KRH49145	Soybean	plasma membrane	54.79	39.43
AT2G37710.1	Thale cress	plasma membrane	55.21	39.26
PGSC0003DMT400052365	Potato	plasma membrane	53.75	38.74
Solyc09g012000.1.1	Tomato	plasma membrane	53.96	38.71
Solyc09g011990.1.1	Tomato	plasma membrane	53.75	38.62
CDY65835	Canola	plasma membrane	52.29	38.09
AT3G53810.1	Thale cress	plasma membrane	53.33	37.81
CDY21254	Canola	plasma membrane	50.83	37.48
PGSC0003DMT400022743	Potato	plasma membrane	52.08	37.43
Bra035326.1-P	Field mustard	plasma membrane	52.08	37.26
AT4G02420.1	Thale cress	plasma membrane	51.04	36.62
CDX90939	Canola	plasma membrane	50.42	36.61
CDY02414	Canola	plasma membrane	44.79	36.44
AT4G02410.1	Thale cress	plasma membrane	51.04	36.35
Bra000881.1-P	Field mustard	plasma membrane	50.42	35.85
Bra018553.1-P	Field mustard	plasma membrane	49.79	35.83
CDY55369	Canola	plasma membrane	49.79	35.67
Bra000880.1-P	Field mustard	plasma membrane	49.38	34.9
TraesCS5A01G484600.1	Wheat	plasma membrane	50.0	34.88
TraesCS7A01G139900.1	Wheat	vacuole	32.29	33.77
TraesCS5A01G484300.1	Wheat	plasma membrane	46.46	32.23
TraesCS1A01G184400.1	Wheat	plasma membrane	43.96	31.12
TraesCS5A01G081600.1	Wheat	plasma membrane	43.96	30.36
Solyc09g011060.2.1	Tomato	plasma membrane	51.88	29.93
Zm00001d024637_P001	Maize	plasma membrane	71.67	25.54
GSMUA_Achr9P09920_001	Banana	plasma membrane	44.38	22.47
GSMUA_Achr9P10000_001	Banana	cytosol	41.67	10.43

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.19	Gene3D:2.60.120.200	Gene3D:3.30.200.20	InterPro:ConA-like_dom_sf	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0030246	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	InterPro:Legume_lectin_dom	PFAM:PF00069
PFAM:PF00139	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27007	PANTHER:PTHR27007:SF28
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF49899	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6A01G352600	EnsemblPlants:TraesCS6A01G352600.1	TIGR:cd14066	SEG:seg	:

Description

No Description!

Coordinates

chr6A:-:584957001..584958443

Molecular Weight (calculated)

54067.6 Da

IEP (calculated)

7.690

GRAVY (calculated)

-0.186

Length

480 amino acids

Sequence
(BLAST)

001: MELQLWVDYD EEETRINVTL APLHVGKPLK PLLSATYDLS TVLTETAYIG FSSTAELTNT SHYVLGWSFG MNMQAPSIDI SKLPKLPSVG EKAQPKLLAI
101: ILPIATAALI MSIGTLVILM VRRRRRRYSE VREDWESEFG PHRFSYKDLF NATQGFKSKN LVGAGGFGEV YKGLLQFSKK EIAVKRMSHE SRQGMKEFIT
201: EVVSIGRLRH RNLVQLLGYC RRKGELMLVY DYMSNGSLDK YIHYQQDDKP TLNWAQRFQV IKGIATGLLY LHEKWEKVVV HRDIKASNVL LDDEMNGRLG
301: DFGLARLYDH GTDPQSTHMV GTMGYLAPEL VRTGKASPLT DVYAFGMFLL EVTCGQKPVR QGPTVENQVF LVDWVLEHWN NRLLSRTVDA RLQGDYGVDE
401: ACLVLKIGLL CLHPFPGSRP SMRQVMQYLD GETPLPEMTT TQLSVEMQGL MQDSGFSTSV MSYPQLMSSF GAVSDLSGGR

Best Arabidopsis Sequence Match ( AT2G37710.1 )
(BLAST)

001: MFLKLLTIFF FFFFNLIFQS SSQSLNFAYN NGFNPPTDLS IQGITTVTPN GLLKLTNTTV QKTGHAFYTK PIRFKDSPNG TVSSFSTSFV FAIHSQIAIL
101: SGHGIAFVVA PNASLPYGNP SQYIGLFNLA NNGNETNHVF AVELDTILST EFNDTNDNHV GIDINSLKSV QSSPAGYWDE KGQFKNLTLI SRKPMQVWVD
201: YDGRTNKIDV TMAPFNEDKP TRPLVTAVRD LSSVLLQDMY VGFSSATGSV LSEHYILGWS FGLNEKAPPL ALSRLPKLPR FEPKRISEFY KIGMPLISLF
301: LIFSFIFLVC YIVRRRRKFA EELEEWEKEF GKNRFRFKDL YYATKGFKEK GLLGTGGFGS VYKGVMPGTK LEIAVKRVSH ESRQGMKEFV AEIVSIGRMS
401: HRNLVPLLGY CRRRGELLLV YDYMPNGSLD KYLYNTPEVT LNWKQRIKVI LGVASGLFYL HEEWEQVVIH RDVKASNVLL DGELNGRLGD FGLARLYDHG
501: SDPQTTHVVG TLGYLAPEHT RTGRATMATD VFAFGAFLLE VACGRRPIEF QQETDETFLL VDWVFGLWNK GDILAAKDPN MGSECDEKEV EMVLKLGLLC
601: SHSDPRARPS MRQVLHYLRG DAKLPELSPL DLSGSGMMFG VHDGFSELGM SYSSSVFKGF TGGSSIADSQ LSGGR

Arabidopsis Description

LECRK41L-type lectin-domain containing receptor kinase IV.1 [Source:UniProtKB/Swiss-Prot;Acc:O80939]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.