Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 7
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G119200.1 | Wheat | plasma membrane | 57.14 | 94.35 |
| TraesCS3A01G101700.1 | Wheat | plasma membrane | 92.71 | 92.43 |
| TraesCS3D01G104100.1 | Wheat | plasma membrane | 92.26 | 92.4 |
| HORVU3Hr1G018500.1 | Barley | plasma membrane | 91.67 | 90.86 |
| HORVU3Hr1G018610.1 | Barley | plasma membrane | 91.52 | 90.57 |
| Os07t0283125-00 | Rice | plasma membrane | 75.45 | 75.78 |
| EER98367 | Sorghum | plasma membrane | 74.26 | 74.37 |
| Zm00001d019411_P001 | Maize | plasma membrane | 71.73 | 70.57 |
| TraesCS3B01G364400.1 | Wheat | plasma membrane | 63.54 | 63.64 |
| TraesCS3B01G364500.1 | Wheat | vacuole | 61.76 | 61.94 |
| TraesCS6B01G160500.1 | Wheat | plasma membrane | 62.2 | 61.47 |
| TraesCS2B01G150100.1 | Wheat | cytosol | 58.18 | 61.19 |
| TraesCS3B01G338800.1 | Wheat | vacuole | 60.71 | 60.9 |
| TraesCS2B01G158800.1 | Wheat | plasma membrane | 57.74 | 60.62 |
| TraesCS1B01G062300.1 | Wheat | plasma membrane | 60.12 | 60.57 |
| TraesCS1B01G062200.1 | Wheat | plasma membrane | 59.08 | 59.88 |
| TraesCS5B01G410900.1 | Wheat | plasma membrane | 60.57 | 59.77 |
| TraesCS3B01G338900.1 | Wheat | plasma membrane | 60.27 | 59.56 |
| TraesCS2B01G388800.1 | Wheat | plasma membrane | 59.67 | 59.23 |
| TraesCS5B01G449800.1 | Wheat | plasma membrane | 61.31 | 58.61 |
| TraesCS3B01G119500.1 | Wheat | plasma membrane | 58.48 | 58.4 |
| TraesCS3B01G119300.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 45.68 | 58.03 |
| TraesCS6B01G385600.1 | Wheat | plasma membrane | 58.18 | 57.75 |
| TraesCS2B01G221100.1 | Wheat | plasma membrane | 58.33 | 57.73 |
| TraesCS6B01G265000.1 | Wheat | plasma membrane | 56.4 | 56.82 |
| TraesCS2B01G221200.1 | Wheat | plasma membrane | 56.1 | 56.35 |
| TraesCS6B01G160600.1 | Wheat | plasma membrane | 56.85 | 55.69 |
| TraesCS2B01G106200.1 | Wheat | plasma membrane | 56.25 | 55.18 |
| TraesCS5B01G449900.1 | Wheat | plasma membrane | 39.73 | 54.71 |
| TraesCS2B01G158700.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 54.76 | 54.28 |
| KRH49145 | Soybean | plasma membrane | 53.12 | 53.52 |
| CDX91325 | Canola | cytosol, mitochondrion | 20.98 | 53.41 |
| KRH00016 | Soybean | plasma membrane | 52.98 | 53.37 |
| AT2G37710.1 | Thale cress | plasma membrane | 52.98 | 52.74 |
| VIT_08s0007g00810.t01 | Wine grape | plasma membrane | 52.83 | 52.21 |
| CDY65835 | Canola | plasma membrane | 51.19 | 52.2 |
| AT3G53810.1 | Thale cress | plasma membrane | 52.53 | 52.14 |
| CDY21254 | Canola | plasma membrane | 50.3 | 51.92 |
| CDX91384 | Canola | plasma membrane | 51.79 | 51.71 |
| Bra005168.1-P | Field mustard | plasma membrane | 51.64 | 51.56 |
| Solyc09g011990.1.1 | Tomato | plasma membrane | 51.19 | 51.5 |
| PGSC0003DMT400052365 | Potato | plasma membrane | 50.74 | 51.2 |
| PGSC0003DMT400022983 | Potato | plasma membrane | 50.15 | 50.68 |
| Bra035326.1-P | Field mustard | plasma membrane | 50.6 | 50.67 |
| CDY02414 | Canola | plasma membrane | 44.2 | 50.34 |
| PGSC0003DMT400022743 | Potato | plasma membrane | 49.4 | 49.7 |
| Solyc09g012000.1.1 | Tomato | plasma membrane | 49.11 | 49.33 |
| Bra000881.1-P | Field mustard | plasma membrane | 49.4 | 49.19 |
| CDX90939 | Canola | plasma membrane | 48.36 | 49.17 |
| AT4G02410.1 | Thale cress | plasma membrane | 49.26 | 49.11 |
| CDY55369 | Canola | plasma membrane | 48.96 | 49.1 |
| AT4G02420.1 | Thale cress | plasma membrane | 48.66 | 48.88 |
| Bra018553.1-P | Field mustard | plasma membrane | 48.51 | 48.88 |
| TraesCS6B01G385500.1 | Wheat | plasma membrane | 46.13 | 46.06 |
| Bra000880.1-P | Field mustard | plasma membrane | 45.98 | 45.51 |
| TraesCS4B01G289100.1 | Wheat | plasma membrane | 43.45 | 42.94 |
| TraesCS5B01G084800.1 | Wheat | plasma membrane | 44.2 | 42.86 |
| Solyc09g011060.2.1 | Tomato | plasma membrane | 49.11 | 39.66 |
| GSMUA_Achr9P09920_001 | Banana | plasma membrane | 39.29 | 27.85 |
| GSMUA_Achr9P10000_001 | Banana | cytosol | 41.52 | 14.55 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.1.19 | Gene3D:2.60.120.200 | Gene3D:3.30.200.20 | InterPro:ConA-like_dom_sf | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 |
| GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 |
| GO:GO:0019538 | GO:GO:0030246 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | InterPro:Legume_lectin_dom | PFAM:PF00069 |
| PFAM:PF00139 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR27007 | PANTHER:PTHR27007:SF25 |
| InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF49899 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS |
| SignalP:SignalP-noTM | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3B01G119600 | EnsemblPlants:TraesCS3B01G119600.1 | TIGR:cd06899 | TIGR:cd14066 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr3B:-:89356005..89358023
Molecular Weight (calculated)
73737.5 Da
IEP (calculated)
6.137
GRAVY (calculated)
0.013
Length
672 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSVLMLVRL LFLICLILAA STTGEADGQL VYSGFTGANL TLDGAATVTP DGLLELTNGT DQQKGHAFYP TPVRFAGSPG GAVQSFSASF VFAIQSIYTD
101: LSAHGMAFVV ASSTNFSSAL PGQLLGLTDI QNNGNGSNHF FAVELDTIQN KEFDDLNANH AGANVNGLRS LQSYYAGYFD DEDGNFRNLS LISREAMQVW
201: VDYDHRVAQI TVTMAPINVR RPAKPLFTAT HNLTTAVTDV AYVGFSSATG TINVRHYVLG WSFAMNGPAP AIDIAKLPKL PRMGPKPRSK VLDIVLPIAS
301: GVFVLTLGTI VLLVLQRRFR YAELREDWEV EFGPQRFSYK DLYRATEGFS DTHLLGIGGF GRVYKGILPV STRMEVAVKK VAHDSKQGIK EFISEVVSIG
401: RLQHRNLAPL LGYCRQKGEL FLVYEYMPNG SVDKYLHGRE GKPILNWAQR WHIIKGIASC LVYLHEEWEK AVIHRDIKAS NVLLDGDMNG RLGDFGLARL
501: YDHDADPQTT HVVGTIGYLA PELGHTSKAT PLTDVFAFGV FVLEVACGQR PVNPNLEDIQ VLLVESVVDQ WNKGSLLDAV DKQLGGNYNA DEACVALKLG
601: LLCSHPFANA RPTMRQVLQY LDGDMPLPEM SPTDLSFQMM TIMQNEGFDQ FIMTYPSSTV SIDSTCVLTV GR
101: LSAHGMAFVV ASSTNFSSAL PGQLLGLTDI QNNGNGSNHF FAVELDTIQN KEFDDLNANH AGANVNGLRS LQSYYAGYFD DEDGNFRNLS LISREAMQVW
201: VDYDHRVAQI TVTMAPINVR RPAKPLFTAT HNLTTAVTDV AYVGFSSATG TINVRHYVLG WSFAMNGPAP AIDIAKLPKL PRMGPKPRSK VLDIVLPIAS
301: GVFVLTLGTI VLLVLQRRFR YAELREDWEV EFGPQRFSYK DLYRATEGFS DTHLLGIGGF GRVYKGILPV STRMEVAVKK VAHDSKQGIK EFISEVVSIG
401: RLQHRNLAPL LGYCRQKGEL FLVYEYMPNG SVDKYLHGRE GKPILNWAQR WHIIKGIASC LVYLHEEWEK AVIHRDIKAS NVLLDGDMNG RLGDFGLARL
501: YDHDADPQTT HVVGTIGYLA PELGHTSKAT PLTDVFAFGV FVLEVACGQR PVNPNLEDIQ VLLVESVVDQ WNKGSLLDAV DKQLGGNYNA DEACVALKLG
601: LLCSHPFANA RPTMRQVLQY LDGDMPLPEM SPTDLSFQMM TIMQNEGFDQ FIMTYPSSTV SIDSTCVLTV GR
001: MFVKLKLIFF FFLLCQIMIS SSQNLNFTYN GFHPPLTDIS LQGLATVTPN GLLKLTNTSV QKTGHAFCTE RIRFKDSQNG NVSSFSTTFV FAIHSQIPTL
101: SGHGIAFVVA PTLGLPFALP SQYIGLFNIS NNGNDTNHIF AVEFDTIQSS EFGDPNDNHV GIDLNGLRSA NYSTAGYRDD HDKFQNLSLI SRKRIQVWID
201: YDNRSHRIDV TVAPFDSDKP RKPLVSYVRD LSSILLEDMY VGFSSATGSV LSEHFLVGWS FRLNGEAPML SLSKLPKLPR FEPRRISEFY KIGMPLISLS
301: LIFSIIFLAF YIVRRKKKYE EELDDWETEF GKNRFRFKEL YHATKGFKEK DLLGSGGFGR VYRGILPTTK LEVAVKRVSH DSKQGMKEFV AEIVSIGRMS
401: HRNLVPLLGY CRRRGELLLV YDYMPNGSLD KYLYNNPETT LDWKQRSTII KGVASGLFYL HEEWEQVVIH RDVKASNVLL DADFNGRLGD FGLARLYDHG
501: SDPQTTHVVG TLGYLAPEHS RTGRATTTTD VYAFGAFLLE VVSGRRPIEF HSASDDTFLL VEWVFSLWLR GNIMEAKDPK LGSSGYDLEE VEMVLKLGLL
601: CSHSDPRARP SMRQVLQYLR GDMALPELTP LDLSAGSVMN LGGRDGFSGI AMTDFSTVFK GFTGGSSIAD SLLSGGR
101: SGHGIAFVVA PTLGLPFALP SQYIGLFNIS NNGNDTNHIF AVEFDTIQSS EFGDPNDNHV GIDLNGLRSA NYSTAGYRDD HDKFQNLSLI SRKRIQVWID
201: YDNRSHRIDV TVAPFDSDKP RKPLVSYVRD LSSILLEDMY VGFSSATGSV LSEHFLVGWS FRLNGEAPML SLSKLPKLPR FEPRRISEFY KIGMPLISLS
301: LIFSIIFLAF YIVRRKKKYE EELDDWETEF GKNRFRFKEL YHATKGFKEK DLLGSGGFGR VYRGILPTTK LEVAVKRVSH DSKQGMKEFV AEIVSIGRMS
401: HRNLVPLLGY CRRRGELLLV YDYMPNGSLD KYLYNNPETT LDWKQRSTII KGVASGLFYL HEEWEQVVIH RDVKASNVLL DADFNGRLGD FGLARLYDHG
501: SDPQTTHVVG TLGYLAPEHS RTGRATTTTD VYAFGAFLLE VVSGRRPIEF HSASDDTFLL VEWVFSLWLR GNIMEAKDPK LGSSGYDLEE VEMVLKLGLL
601: CSHSDPRARP SMRQVLQYLR GDMALPELTP LDLSAGSVMN LGGRDGFSGI AMTDFSTVFK GFTGGSSIAD SLLSGGR
Arabidopsis Description
LECRK42L-type lectin-domain containing receptor kinase IV.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M345]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.