Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- vacuole 5
- extracellular 3
- endoplasmic reticulum 3
- plasma membrane 4
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G304400.1 | Wheat | plasma membrane | 97.01 | 97.01 |
| KXG19863 | Sorghum | plasma membrane | 74.33 | 74.55 |
| Zm00001d045838_P001 | Maize | plasma membrane | 73.13 | 73.46 |
| TraesCS3B01G119200.1 | Wheat | plasma membrane | 38.51 | 63.39 |
| TraesCS2B01G150100.1 | Wheat | cytosol | 59.55 | 62.44 |
| TraesCS3B01G119600.1 | Wheat | plasma membrane | 60.9 | 60.71 |
| TraesCS3B01G364500.1 | Wheat | vacuole | 60.6 | 60.6 |
| TraesCS1B01G062300.1 | Wheat | plasma membrane | 60.3 | 60.57 |
| TraesCS6B01G385600.1 | Wheat | plasma membrane | 61.19 | 60.56 |
| TraesCS3B01G338900.1 | Wheat | plasma membrane | 61.34 | 60.44 |
| TraesCS5B01G449800.1 | Wheat | plasma membrane | 63.28 | 60.31 |
| TraesCS6B01G160500.1 | Wheat | plasma membrane | 61.04 | 60.15 |
| TraesCS1B01G062200.1 | Wheat | plasma membrane | 59.4 | 60.03 |
| TraesCS3B01G364400.1 | Wheat | plasma membrane | 59.7 | 59.61 |
| TraesCS5B01G410900.1 | Wheat | plasma membrane | 60.45 | 59.47 |
| TraesCS6B01G160600.1 | Wheat | plasma membrane | 60.3 | 58.89 |
| TraesCS3B01G119300.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 46.27 | 58.6 |
| TraesCS3B01G119500.1 | Wheat | plasma membrane | 58.51 | 58.25 |
| TraesCS2B01G221200.1 | Wheat | plasma membrane | 56.42 | 56.5 |
| TraesCS5B01G449900.1 | Wheat | plasma membrane | 40.9 | 56.15 |
| TraesCS2B01G388800.1 | Wheat | plasma membrane | 56.42 | 55.83 |
| TraesCS2B01G221100.1 | Wheat | plasma membrane | 56.42 | 55.67 |
| TraesCS2B01G158800.1 | Wheat | plasma membrane | 52.69 | 55.16 |
| VIT_08s0007g00810.t01 | Wine grape | plasma membrane | 55.82 | 55.0 |
| KRH49145 | Soybean | plasma membrane | 54.63 | 54.87 |
| KRH00016 | Soybean | plasma membrane | 54.33 | 54.57 |
| TraesCS2B01G158700.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 55.07 | 54.42 |
| CDX91325 | Canola | cytosol, mitochondrion | 21.34 | 54.17 |
| PGSC0003DMT400022983 | Potato | plasma membrane | 52.99 | 53.38 |
| TraesCS6B01G265000.1 | Wheat | plasma membrane | 52.69 | 52.92 |
| Solyc09g011990.1.1 | Tomato | plasma membrane | 52.69 | 52.84 |
| Solyc09g012000.1.1 | Tomato | plasma membrane | 51.79 | 51.87 |
| AT2G37710.1 | Thale cress | plasma membrane | 51.94 | 51.56 |
| TraesCS2B01G106200.1 | Wheat | plasma membrane | 52.69 | 51.53 |
| PGSC0003DMT400052365 | Potato | plasma membrane | 51.19 | 51.5 |
| PGSC0003DMT400022743 | Potato | plasma membrane | 50.9 | 51.05 |
| CDY21254 | Canola | plasma membrane | 49.55 | 51.0 |
| CDX91384 | Canola | plasma membrane | 51.19 | 50.97 |
| Bra005168.1-P | Field mustard | plasma membrane | 50.9 | 50.67 |
| CDY65835 | Canola | plasma membrane | 49.7 | 50.53 |
| AT3G53810.1 | Thale cress | plasma membrane | 50.3 | 49.78 |
| Bra035326.1-P | Field mustard | plasma membrane | 49.7 | 49.63 |
| CDY02414 | Canola | plasma membrane | 43.58 | 49.49 |
| AT4G02410.1 | Thale cress | plasma membrane | 49.7 | 49.41 |
| TraesCS6B01G385500.1 | Wheat | plasma membrane | 49.55 | 49.33 |
| AT4G02420.1 | Thale cress | plasma membrane | 48.96 | 49.03 |
| Bra018553.1-P | Field mustard | plasma membrane | 48.36 | 48.58 |
| CDY55369 | Canola | plasma membrane | 48.06 | 48.06 |
| CDX90939 | Canola | plasma membrane | 47.31 | 47.96 |
| Bra000881.1-P | Field mustard | plasma membrane | 48.06 | 47.7 |
| Bra000880.1-P | Field mustard | plasma membrane | 46.42 | 45.8 |
| TraesCS5B01G084800.1 | Wheat | plasma membrane | 43.88 | 42.42 |
| TraesCS4B01G289100.1 | Wheat | plasma membrane | 42.54 | 41.91 |
| Solyc09g011060.2.1 | Tomato | plasma membrane | 50.3 | 40.5 |
| GSMUA_Achr9P09920_001 | Banana | plasma membrane | 40.75 | 28.8 |
| GSMUA_Achr9P10000_001 | Banana | cytosol | 41.94 | 14.66 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.1.19 | Gene3D:2.60.120.200 | Gene3D:3.30.200.20 | InterPro:ConA-like_dom_sf | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 |
| GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 |
| GO:GO:0019538 | GO:GO:0030246 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | InterPro:Legume_lectin_dom | PFAM:PF00069 |
| PFAM:PF00139 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR27007 | PANTHER:PTHR27007:SF28 |
| InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF49899 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS |
| SignalP:SignalP-noTM | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3B01G338800 | EnsemblPlants:TraesCS3B01G338800.1 | TIGR:cd06899 | TIGR:cd14066 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr3B:+:545048601..545050613
Molecular Weight (calculated)
74550.6 Da
IEP (calculated)
6.935
GRAVY (calculated)
-0.086
Length
670 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSKKIMFFK LIISLSLAAR STGNEDDQFV YSGFTGSNLA LDGNARITPS GLLELTNGTA RVKGHAFHPN PMRFHKSPDG TVQSFSVSFV FAILSTDPDL
101: SGHGLAFFIA PTRNFSAAFP TQYLGLFSDQ NNGDPNNHIF AVELDTIQNY DLEDINSNHI GININNLHSV QSHDAGYYSN QSGIFERLAL NSHEAMQVWV
201: NYDREAIQIN VTMAPINLAK SERPLLSTTF NLSTVITSPA YIGFSSSTGT VSAQHYVLGW SFGMDSLAPP IDISKLSELP RLGQKAQSMR LHILLPIGIV
301: VFLFAVTATI FLLIRRNLRY AELCEDWEVE YGPHRFSYKD LFDATEGFKD KNLLGGGGFG KVYKGVLPIS RFNIAVKKVS HDSKQGMKEF IAEIVSIGRL
401: QHRNLVQLLG YCRRKGELLL VYDYMPNGSL DKYLYGKDGK PTLDWSQRFQ IIKCVSNGLL YLHEECEKTI IHRDIKASNV LIDTEISGRI GDFGLARLYE
501: HGSDPETTHV VGTIGYLAPE LARTGKATPF TDVFSFGVFI LEVTCGQKPI MKDTEESHLM LVDWVLEHWR KGSLNDAVDI KLQGKYDVGE ACLALKLGLL
601: CSHPFTNIRP TMRQVMQYLN KEMPLPELMP THLSFCMLAL MQSEGFNPYI ISHSSSATSF GTMSSLSGGR
101: SGHGLAFFIA PTRNFSAAFP TQYLGLFSDQ NNGDPNNHIF AVELDTIQNY DLEDINSNHI GININNLHSV QSHDAGYYSN QSGIFERLAL NSHEAMQVWV
201: NYDREAIQIN VTMAPINLAK SERPLLSTTF NLSTVITSPA YIGFSSSTGT VSAQHYVLGW SFGMDSLAPP IDISKLSELP RLGQKAQSMR LHILLPIGIV
301: VFLFAVTATI FLLIRRNLRY AELCEDWEVE YGPHRFSYKD LFDATEGFKD KNLLGGGGFG KVYKGVLPIS RFNIAVKKVS HDSKQGMKEF IAEIVSIGRL
401: QHRNLVQLLG YCRRKGELLL VYDYMPNGSL DKYLYGKDGK PTLDWSQRFQ IIKCVSNGLL YLHEECEKTI IHRDIKASNV LIDTEISGRI GDFGLARLYE
501: HGSDPETTHV VGTIGYLAPE LARTGKATPF TDVFSFGVFI LEVTCGQKPI MKDTEESHLM LVDWVLEHWR KGSLNDAVDI KLQGKYDVGE ACLALKLGLL
601: CSHPFTNIRP TMRQVMQYLN KEMPLPELMP THLSFCMLAL MQSEGFNPYI ISHSSSATSF GTMSSLSGGR
001: MFLKLLTIFF FFFFNLIFQS SSQSLNFAYN NGFNPPTDLS IQGITTVTPN GLLKLTNTTV QKTGHAFYTK PIRFKDSPNG TVSSFSTSFV FAIHSQIAIL
101: SGHGIAFVVA PNASLPYGNP SQYIGLFNLA NNGNETNHVF AVELDTILST EFNDTNDNHV GIDINSLKSV QSSPAGYWDE KGQFKNLTLI SRKPMQVWVD
201: YDGRTNKIDV TMAPFNEDKP TRPLVTAVRD LSSVLLQDMY VGFSSATGSV LSEHYILGWS FGLNEKAPPL ALSRLPKLPR FEPKRISEFY KIGMPLISLF
301: LIFSFIFLVC YIVRRRRKFA EELEEWEKEF GKNRFRFKDL YYATKGFKEK GLLGTGGFGS VYKGVMPGTK LEIAVKRVSH ESRQGMKEFV AEIVSIGRMS
401: HRNLVPLLGY CRRRGELLLV YDYMPNGSLD KYLYNTPEVT LNWKQRIKVI LGVASGLFYL HEEWEQVVIH RDVKASNVLL DGELNGRLGD FGLARLYDHG
501: SDPQTTHVVG TLGYLAPEHT RTGRATMATD VFAFGAFLLE VACGRRPIEF QQETDETFLL VDWVFGLWNK GDILAAKDPN MGSECDEKEV EMVLKLGLLC
601: SHSDPRARPS MRQVLHYLRG DAKLPELSPL DLSGSGMMFG VHDGFSELGM SYSSSVFKGF TGGSSIADSQ LSGGR
101: SGHGIAFVVA PNASLPYGNP SQYIGLFNLA NNGNETNHVF AVELDTILST EFNDTNDNHV GIDINSLKSV QSSPAGYWDE KGQFKNLTLI SRKPMQVWVD
201: YDGRTNKIDV TMAPFNEDKP TRPLVTAVRD LSSVLLQDMY VGFSSATGSV LSEHYILGWS FGLNEKAPPL ALSRLPKLPR FEPKRISEFY KIGMPLISLF
301: LIFSFIFLVC YIVRRRRKFA EELEEWEKEF GKNRFRFKDL YYATKGFKEK GLLGTGGFGS VYKGVMPGTK LEIAVKRVSH ESRQGMKEFV AEIVSIGRMS
401: HRNLVPLLGY CRRRGELLLV YDYMPNGSLD KYLYNTPEVT LNWKQRIKVI LGVASGLFYL HEEWEQVVIH RDVKASNVLL DGELNGRLGD FGLARLYDHG
501: SDPQTTHVVG TLGYLAPEHT RTGRATMATD VFAFGAFLLE VACGRRPIEF QQETDETFLL VDWVFGLWNK GDILAAKDPN MGSECDEKEV EMVLKLGLLC
601: SHSDPRARPS MRQVLHYLRG DAKLPELSPL DLSGSGMMFG VHDGFSELGM SYSSSVFKGF TGGSSIADSQ LSGGR
Arabidopsis Description
LECRK41L-type lectin-domain containing receptor kinase IV.1 [Source:UniProtKB/Swiss-Prot;Acc:O80939]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.