Factsheet for HORVU5Hr1G016730.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 5
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G001280.1
HORVU2Hr1G016740.4
HORVU3Hr1G038010.1
HORVU3Hr1G079210.4
HORVU4Hr1G026290.3
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G044710.4

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G66790.1	HORVU0Hr1G001280.1	AT2G41090.1	17360592
AT5G66790.1	HORVU2Hr1G016740.4	AT2G41090.1	17360592
AT5G66790.1	HORVU3Hr1G038010.1	AT2G41090.1	17360592
AT5G66790.1	HORVU3Hr1G079210.4	AT2G41090.1	17360592
AT5G66790.1	HORVU4Hr1G026290.3	AT2G41090.1	17360592
AT5G66790.1	HORVU5Hr1G014060.1	AT2G41090.1	17360592
AT5G66790.1	HORVU5Hr1G014070.2	AT2G41090.1	17360592
AT5G66790.1	HORVU5Hr1G044710.4	AT2G41090.1	17360592
AT5G66790.1	HORVU0Hr1G001280.1	AT2G41100.1	17360592
AT5G66790.1	HORVU2Hr1G016740.4	AT2G41100.1	17360592
AT5G66790.1	HORVU3Hr1G038010.1	AT2G41100.1	17360592
AT5G66790.1	HORVU3Hr1G079210.4	AT2G41100.1	17360592
AT5G66790.1	HORVU4Hr1G026290.3	AT2G41100.1	17360592
AT5G66790.1	HORVU5Hr1G014060.1	AT2G41100.1	17360592
AT5G66790.1	HORVU5Hr1G014070.2	AT2G41100.1	17360592
AT5G66790.1	HORVU5Hr1G044710.4	AT2G41100.1	17360592
AT5G66790.1	HORVU0Hr1G001280.1	AT5G21274.1	17360592
AT5G66790.1	HORVU2Hr1G016740.4	AT5G21274.1	17360592
AT5G66790.1	HORVU3Hr1G038010.1	AT5G21274.1	17360592
AT5G66790.1	HORVU3Hr1G079210.4	AT5G21274.1	17360592
AT5G66790.1	HORVU4Hr1G026290.3	AT5G21274.1	17360592
AT5G66790.1	HORVU5Hr1G014060.1	AT5G21274.1	17360592
AT5G66790.1	HORVU5Hr1G014070.2	AT5G21274.1	17360592
AT5G66790.1	HORVU5Hr1G044710.4	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G014000.1	Barley	plastid	30.46	80.0
Zm00001d030942_P001	Maize	plasma membrane	64.94	62.78
KRH28544	Soybean	cytosol, nucleus, plastid	11.93	56.08
HORVU7Hr1G066130.1	Barley	plasma membrane	12.21	50.6
Os12t0595800-03	Rice	plasma membrane	46.41	44.37
HORVU6Hr1G080640.1	Barley	cytosol	17.53	42.21
PGSC0003DMT400008628	Potato	cytosol	31.61	40.74
Bra012104.1-P	Field mustard	plastid	27.01	40.0
HORVU5Hr1G110430.1	Barley	mitochondrion	17.82	39.24
GSMUA_Achr9P26460_001	Banana	plasma membrane	33.91	38.56
HORVU5Hr1G107330.1	Barley	plasma membrane	23.42	37.21
KRH76928	Soybean	plasma membrane	36.93	37.03
Solyc02g090110.2.1	Tomato	plasma membrane	37.36	36.98
PGSC0003DMT400026001	Potato	plasma membrane	37.21	36.84
VIT_00s0207g00280.t01	Wine grape	plasma membrane	36.21	36.57
CDY38944	Canola	plasma membrane	35.49	36.27
Bra032167.1-P	Field mustard	plasma membrane	35.49	36.27
Solyc04g079710.2.1	Tomato	plasma membrane	35.34	36.23
VIT_18s0001g11620.t01	Wine grape	plasma membrane	35.92	36.02
CDX89573	Canola	plasma membrane	35.34	36.02
KRH70004	Soybean	plasma membrane	36.64	36.02
KRH51920	Soybean	plasma membrane	36.64	35.97
AT5G66790.1	Thale cress	plasma membrane	32.04	35.85
KRH08354	Soybean	plasma membrane	36.64	35.61
CDY68677	Canola	plasma membrane	35.78	35.57
KRH61220	Soybean	plasma membrane	36.35	35.53
HORVU4Hr1G066310.2	Barley	plasma membrane	36.64	35.37
CDY54167	Canola	plasma membrane	30.6	34.58
CDY53844	Canola	plasma membrane	30.46	34.36
AT2G23450.2	Thale cress	plasma membrane	34.91	34.32
Bra039201.1-P	Field mustard	plasma membrane	35.78	33.92
CDY46073	Canola	plasma membrane	35.63	33.74
GSMUA_Achr8P02870_001	Banana	mitochondrion, plasma membrane	27.73	32.33
HORVU3Hr1G022780.2	Barley	plasma membrane	27.87	29.44
HORVU3Hr1G064110.3	Barley	plasma membrane	28.59	27.99
HORVU1Hr1G083220.3	Barley	plastid	28.74	27.74
HORVU3Hr1G007540.1	Barley	plasma membrane, plastid	21.26	25.56
HORVU3Hr1G006830.22	Barley	plasma membrane	24.28	24.67
HORVU3Hr1G007590.1	Barley	cytosol, plastid	17.96	16.87

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.25	Gene3D:2.10.25.10	Gene3D:3.30.200.20	EMBL:AK365154	UniProt:F2DMN6
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0030246
GO:GO:0030247	EnsemblPlantsGene:HORVU5Hr1G016730	EnsemblPlants:HORVU5Hr1G016730.2	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714
PFAM:PF13947	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27005	PANTHER:PTHR27005:SF17
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000200697C	InterPro:WAK_GUB	SEG:seg	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DMN6]

Coordinates

chrchr5H:+:62950381..62956722

Molecular Weight (calculated)

73353.2 Da

IEP (calculated)

7.699

GRAVY (calculated)

-0.019

Length

696 amino acids

Sequence
(BLAST)

001: MHRLVVLLLA VLLPHETISA AETPGDRCSR QCGSTTVPYP FGFSPGCPIL LSCDASVSTP ILPYIGESGT AYRVISFNST TSTIVVGLPP SCSRSVPEAR
101: RALSGRNYAV SSRTGLFLRG GCAGINASAG VGSCSVPADV MSRLLRTARC VGVGNGNDTA VACVAFSVAN STAHERDDQF LRWEKVEKQR CDDVLTSTVF
201: VVTAEGTATL EFAVAELGWW LNGTCGADGT GERCAANATC TDVDTPGGET GHRCACAAGM EGDGFSGGDG CYRAKRVPKK KVAFIVVGVV VGVAAAAGVL
301: LLLCWAQRRR SGGKGRHGSS RLAAMRLLSE AATSSGVPVY SYNEVARATN SFSHTHRLGT GAYGTVYVGR LPANSTALVA IKRLRCRHDD DGDDGGRAVA
401: LLLNEIRLIS SLSHPNLVRL LGCCLDRGEH ILVYELVPNG TLSHHLHGGG DGDGDGNPTL PWRARLGVAA GTAAAIAYLH AARPPIFHRD VKSGNILLGA
501: DLRAKLADFG LSRAARGAED ASRSHVSTAP QGTPGYVDPE YHHSFHLSDK SDVYSFGVVL LELITAMKVV DFGRPANEVN LACLALDRIG KGRVHEIVDP
601: ALLRHGEDWV MESVRHVSEL AFRCLAFDKD VRPSMSEVAA ELCRIRDAAP DSGIADAGLD GPDAAARKAR SPVSVQDVWV SDRSSPSTNG SMPRFA

Best Arabidopsis Sequence Match ( AT1G18390.1 )
(BLAST)

001: MSIFFFFISF VVFSVADLPS CFSADQQYEE CRSRNLTCGS GHRVFESTTY PFWGGFNKPK FCGHSSFKLS CEGDQNLTLA IGNITLRVVS ANLEDHKISV
101: ADDSLLDGGC LNIWNFNGKN QFTLDSNTET IDVFVNCSGV APLQISCEES YEDPVTYHVL RSSDSDEGCM KYAEIPMLRS AKDELQRSEL TFVEALRKGF
201: DLRYIMEDKA CRRCIDSGGI CGSALDSESF RCLCADRPHN SSCDDNTNQG KNDKRRRVIV KVLIGASAAV VGLIAASIFW YVYHRRKTKS YRNSSALLPR
301: NISSDPSAKS FDIEKAEELL VGVHIFSYEE LEEATNNFDP SKELGDGGFG TVYYGKLKDG RSVAVKRLYD NNFKRAEQFR NEVEILTGLR HPNLVALFGC
401: SSKQSRDLLL VYEYVANGTL ADHLHGPQAN PSSLPWSIRL KIAVETASAL KYLHASKIIH RDVKSNNILL DQNFNVKVAD FGLSRLFPMD KTHVSTAPQG
501: TPGYVDPDYH LCYQLSNKSD VYSFAVVLME LISSLPAVDI TRPRQEINLS NMAVVKIQNH ELRDMVDPSL GFDTDTRVRQ TVIAVAELAF QCLQSDKDLR
601: PCMSHVQDTL TRIQNNGFGS EMDVVDVNKS GPLVAQSPDS VIVKWDSK

Arabidopsis Description

Protein kinase superfamily protein [Source:TAIR;Acc:AT1G18390]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.