Factsheet for PGSC0003DMT400008628

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plasma membrane 1
cytosol 2
plastid 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400014123
PGSC0003DMT400018569
PGSC0003DMT400034833
PGSC0003DMT400042062
PGSC0003DMT400046278
PGSC0003DMT400054299
PGSC0003DMT400058435
PGSC0003DMT400070437
PGSC0003DMT400097662

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G66790.1	PGSC0003DMT400014123	AT2G41090.1	17360592
AT5G66790.1	PGSC0003DMT400018569	AT2G41090.1	17360592
AT5G66790.1	PGSC0003DMT400046278	AT2G41090.1	17360592
AT5G66790.1	PGSC0003DMT400054299	AT2G41090.1	17360592
AT5G66790.1	PGSC0003DMT400058435	AT2G41090.1	17360592
AT5G66790.1	PGSC0003DMT400070437	AT2G41090.1	17360592
AT5G66790.1	PGSC0003DMT400097662	AT2G41090.1	17360592
AT5G66790.1	PGSC0003DMT400014123	AT2G41100.1	17360592
AT5G66790.1	PGSC0003DMT400018569	AT2G41100.1	17360592
AT5G66790.1	PGSC0003DMT400046278	AT2G41100.1	17360592
AT5G66790.1	PGSC0003DMT400054299	AT2G41100.1	17360592
AT5G66790.1	PGSC0003DMT400058435	AT2G41100.1	17360592
AT5G66790.1	PGSC0003DMT400070437	AT2G41100.1	17360592
AT5G66790.1	PGSC0003DMT400097662	AT2G41100.1	17360592
AT5G66790.1	PGSC0003DMT400034833	AT4G14640.1	17360592
AT5G66790.1	PGSC0003DMT400042062	AT4G14640.1	17360592
AT5G66790.1	PGSC0003DMT400014123	AT5G21274.1	17360592
AT5G66790.1	PGSC0003DMT400018569	AT5G21274.1	17360592
AT5G66790.1	PGSC0003DMT400046278	AT5G21274.1	17360592
AT5G66790.1	PGSC0003DMT400054299	AT5G21274.1	17360592
AT5G66790.1	PGSC0003DMT400058435	AT5G21274.1	17360592
AT5G66790.1	PGSC0003DMT400070437	AT5G21274.1	17360592
AT5G66790.1	PGSC0003DMT400097662	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g079710.2.1	Tomato	plasma membrane	97.22	77.32
GSMUA_Achr8P26560_001	Banana	mitochondrion	40.56	54.61
Bra012104.1-P	Field mustard	plastid	45.93	52.77
VIT_18s0001g11620.t01	Wine grape	plasma membrane	67.04	52.16
KRH51920	Soybean	plasma membrane	65.74	50.07
KRH61220	Soybean	plasma membrane	65.37	49.58
PGSC0003DMT400026001	Potato	plasma membrane	61.85	47.51
PGSC0003DMT400015323	Potato	cytosol	25.93	46.82
PGSC0003DMT400014680	Potato	cytosol	28.7	43.79
GSMUA_Achr2P08740_001	Banana	plasma membrane	50.0	43.48
EER95236	Sorghum	plasma membrane	55.37	41.88
GSMUA_Achr3P15100_001	Banana	plasma membrane	49.07	41.73
PGSC0003DMT400003222	Potato	plasma membrane	10.19	41.35
PGSC0003DMT400040920	Potato	mitochondrion	29.44	41.19
Os03t0225700-01	Rice	plasma membrane	53.52	41.05
HORVU1Hr1G014000.1	Barley	plastid	19.81	40.38
CDY53844	Canola	plasma membrane	45.93	40.19
Zm00001d028280_P001	Maize	plasma membrane	52.78	40.14
TraesCS4B01G238700.1	Wheat	plasma membrane	52.41	40.09
CDY54167	Canola	plasma membrane	45.37	39.77
TraesCS4D01G238900.1	Wheat	plasma membrane	52.41	39.58
TraesCS4A01G062000.1	Wheat	plasma membrane	52.04	39.58
AT5G66790.1	Thale cress	plasma membrane	45.56	39.55
HORVU4Hr1G066310.2	Barley	plasma membrane	52.59	39.39
GSMUA_Achr9P26460_001	Banana	plasma membrane	43.89	38.73
PGSC0003DMT400078440	Potato	plasma membrane	31.48	37.12
PGSC0003DMT400087311	Potato	plasma membrane	30.19	36.3
TraesCS5D01G073900.2	Wheat	plasma membrane	41.67	32.37
GSMUA_Achr8P02870_001	Banana	mitochondrion, plasma membrane	35.56	32.16
TraesCS5A01G062600.1	Wheat	plasma membrane	41.48	32.09
TraesCS5B01G069900.1	Wheat	plasma membrane	41.11	31.67
HORVU5Hr1G016730.2	Barley	plasma membrane	40.74	31.61
Zm00001d030942_P001	Maize	plasma membrane	40.37	30.28
PGSC0003DMT400005156	Potato	plasma membrane	33.52	28.87
PGSC0003DMT400078448	Potato	cytosol, nucleus, plasma membrane	32.96	28.43
Os12t0595800-03	Rice	plasma membrane	37.78	28.02
PGSC0003DMT400078451	Potato	plasma membrane	33.89	27.73
PGSC0003DMT400078444	Potato	plasma membrane	31.11	26.92
PGSC0003DMT400078437	Potato	plasma membrane	31.67	26.64
PGSC0003DMT400078441	Potato	plasma membrane	32.22	26.32
PGSC0003DMT400078426	Potato	plasma membrane	33.15	26.32
PGSC0003DMT400078434	Potato	plasma membrane	32.22	25.89
PGSC0003DMT400014683	Potato	plasma membrane	31.85	25.79
PGSC0003DMT400078429	Potato	plasma membrane	31.3	25.53
PGSC0003DMT400033789	Potato	plasma membrane	29.63	25.4
PGSC0003DMT400014682	Potato	plasma membrane	31.48	25.3
PGSC0003DMT400067835	Potato	plasma membrane	32.04	24.57
PGSC0003DMT400058195	Potato	plasma membrane	29.07	24.53
PGSC0003DMT400014684	Potato	plasma membrane	24.44	19.64

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.25	Gene3D:2.10.25.10	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0ZUU9
PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400003343	PGSC:PGSC0003DMG400003343	EnsemblPlants:PGSC0003DMT400008628	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27005	PANTHER:PTHR27005:SF16	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI000295D568	SEG:seg	:

Description

Kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400003343]

Coordinates

chr4:+:69075409..69079657

Molecular Weight (calculated)

59933.1 Da

IEP (calculated)

7.451

GRAVY (calculated)

-0.311

Length

540 amino acids

Sequence
(BLAST)

001: MSCYSEPNSE NNFINLKNLS KTGCGSLFSA ISVESTVNSS SVSLDVQVVQ LGWWIHGHCR CSSNANCTKI SSPINGKRGY RCQCFEGFIG DGFLAGSGCR
101: KDETSCNPSK YLSGKCGGTT RVGVLVGGIV AGASLMVSIG LICCFIRRRL NFQNRRRRNR ELCETTGISI PVYQYKEMEK ATDFFSEKRR LGNGAYGTVY
201: SGKLQNDNWV AIKRIRHRDT DSIEQFINEI KLLSSVNHPN LVRLLGCSIE NGEQILVYEY MPNGTLSQHI QREKGNGLPW PVRLTIGAET AQAIAYLHNA
301: THPPIYHRDV KSSNILLDYN YKSKVADFGL SRLGMVESSH ISTAPQGTPG YLDPQYHQNF QLSDKSDVYS FGVVLAEIIT GLKAVDFARP QDEINLAALA
401: IDRIGKGNLD EIIDPFIELH MDAWTLSSIH KVAELAFRCL AFHRDMRPSM MEVAIELEQL RLSRWTNSED NITGSSEGSS ISSTSDASEK PLNLSIKKQE
501: MDIFSTDSKI KDYSPVSVQD PWSSEQSSPS CSSLLNHIVK

Best Arabidopsis Sequence Match ( AT2G23450.2 )
(BLAST)

001: MLRSIFDFNQ RSTKMVMISH KLDLILVFII VIGGSIFRRV SANFTVPCNG RCGGLTLPYP FGFSNGCSIR FDCSAAEKPM IGDFSVQNVT ENSIFVGLSH
101: NCTRKIEDMN PLFGENFAPT SENSFLMENC NRTTDGCSIK QKFLENVLKL KSCDATGNIS CFSLDSNSSS KNSAKFFSMK TLRNSSCSLL FSSIAFESVG
201: VNAGIALEFE RVRLGWWLKG GCESGTCAAN TDCTDVETPH GYAGHRCSCL DGFHGDGYTN PCQRALPECR GSKLVWRHCR SNLITIVGGT VGGAFLLAAL
301: AFFFFCKRRR STPLRSHLSA KRLLSEAAGN SSVAFFPYKE IEKATDGFSE KQKLGIGAYG TVYRGKLQND EWVAIKRLRH RDSESLDQVM NEIKLLSSVS
401: HPNLVRLLGC CIEQGDPVLV YEYMPNGTLS EHLQRDRGSG LPWTLRLTVA TQTAKAIAYL HSSMNPPIYH RDIKSTNILL DYDFNSKVAD FGLSRLGMTE
501: SSHISTAPQG TPGYLDPQYH QCFHLSDKSD VYSFGVVLAE IITGLKVVDF TRPHTEINLA ALAVDKIGSG CIDEIIDPIL DLDLDAWTLS SIHTVAELAF
601: RCLAFHSDMR PTMTEVADEL EQIRLSGWIP SMSLDSPAGS LRSSDRGSER SVKQSSIGSR RVVIPQKQPD CLASVEEISD SSPISVQDPW LSAQSSPSTN
701: TLLGNIPR

Arabidopsis Description

WAKL14Wall-associated receptor kinase-like 14 [Source:UniProtKB/Swiss-Prot;Acc:Q8RY67]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.