Factsheet for PGSC0003DMT400040920

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400014680	Potato	cytosol	72.02	78.53
KRH58616	Soybean	cytosol	15.8	75.31
KRH72047	Soybean	cytosol	6.99	69.23
PGSC0003DMT400015323	Potato	cytosol	48.19	62.21
Solyc12g036330.1.1	Tomato	plasma membrane	96.63	57.3
PGSC0003DMT400003222	Potato	plasma membrane	17.88	51.88
PGSC0003DMT400078440	Potato	plasma membrane	59.84	50.44
PGSC0003DMT400014683	Potato	plasma membrane	78.24	45.28
PGSC0003DMT400014682	Potato	plasma membrane	78.24	44.94
KRH42522	Soybean	plasma membrane	65.03	37.86
KRH39152	Soybean	endoplasmic reticulum	66.84	36.75
PGSC0003DMT400078448	Potato	cytosol, nucleus, plasma membrane	59.59	36.74
PGSC0003DMT400078444	Potato	plasma membrane	58.29	36.06
KRH48542	Soybean	endoplasmic reticulum	65.28	35.8
PGSC0003DMT400078451	Potato	plasma membrane	59.84	35.0
PGSC0003DMT400078441	Potato	plasma membrane	59.84	34.95
PGSC0003DMT400078426	Potato	plasma membrane	61.14	34.71
PGSC0003DMT400078434	Potato	plasma membrane	59.33	34.08
PGSC0003DMT400078437	Potato	plasma membrane	55.96	33.64
PGSC0003DMT400067835	Potato	plasma membrane	61.14	33.52
PGSC0003DMT400078429	Potato	plasma membrane	57.25	33.38
PGSC0003DMT400087311	Potato	plasma membrane	34.72	29.84
PGSC0003DMT400008628	Potato	cytosol	41.19	29.44
CDY23537	Canola	plastid	11.66	28.3
VIT_17s0000g03340.t01	Wine grape	plasma membrane	69.17	27.75
PGSC0003DMT400026001	Potato	plasma membrane	42.75	23.47
PGSC0003DMT400058195	Potato	plasma membrane	38.08	22.97
PGSC0003DMT400005156	Potato	plasma membrane	37.31	22.97
PGSC0003DMT400033789	Potato	plasma membrane	36.79	22.54
PGSC0003DMT400014684	Potato	plasma membrane	26.94	15.48
KRH39159	Soybean	extracellular	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.20	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1BAM6	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG402015827	PGSC:PGSC0003DMG402015827
EnsemblPlants:PGSC0003DMT400040920	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27005
PANTHER:PTHR27005:SF31	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0002948A0D	:	:	:	:	:

Description

Wall-associated kinase [Source:PGSC_GENE;Acc:PGSC0003DMG402015827]

Coordinates

chr12:+:40363665..40366470

Molecular Weight (calculated)

43147.1 Da

IEP (calculated)

6.718

GRAVY (calculated)

-0.419

Length

386 amino acids

Sequence
(BLAST)

001: MAGVIFLIHR RRQNRKSYAG SSLITRNILS YPSSMKDPEK ANIAMGVHLF DYNELEEATN NFDSKKELGD GGYGTVYKGK LRDGRVVAVK RLYENNCKRV
101: EQFMNEIDIL TRLHHPNLVT LYGCTSRHSS ELLLVYEYIP NGTVADHLHG GDSRRGSPSW NTRMKIAIET ANALAYLHAS DVIHRDVKTN NILLDNNFCV
201: KVADFGLSRL FPTHLTHVST APQGTPGYVD PEYHECYQLT DKSDVYSFGV VLVELISSLP AVDICRHRHE INLSNMAINK IQSNLLHELV DSNIGFDTDD
301: NIRSMITAMA ELAFQCLQND GDMRPSMQEV VEALLRIQRM NKTGKTDKGH PDDDDAGLSK NNTSLVSPDS VTAKWSSSLT TPNGST

Best Arabidopsis Sequence Match ( AT1G18390.1 )
(BLAST)

001: MSIFFFFISF VVFSVADLPS CFSADQQYEE CRSRNLTCGS GHRVFESTTY PFWGGFNKPK FCGHSSFKLS CEGDQNLTLA IGNITLRVVS ANLEDHKISV
101: ADDSLLDGGC LNIWNFNGKN QFTLDSNTET IDVFVNCSGV APLQISCEES YEDPVTYHVL RSSDSDEGCM KYAEIPMLRS AKDELQRSEL TFVEALRKGF
201: DLRYIMEDKA CRRCIDSGGI CGSALDSESF RCLCADRPHN SSCDDNTNQG KNDKRRRVIV KVLIGASAAV VGLIAASIFW YVYHRRKTKS YRNSSALLPR
301: NISSDPSAKS FDIEKAEELL VGVHIFSYEE LEEATNNFDP SKELGDGGFG TVYYGKLKDG RSVAVKRLYD NNFKRAEQFR NEVEILTGLR HPNLVALFGC
401: SSKQSRDLLL VYEYVANGTL ADHLHGPQAN PSSLPWSIRL KIAVETASAL KYLHASKIIH RDVKSNNILL DQNFNVKVAD FGLSRLFPMD KTHVSTAPQG
501: TPGYVDPDYH LCYQLSNKSD VYSFAVVLME LISSLPAVDI TRPRQEINLS NMAVVKIQNH ELRDMVDPSL GFDTDTRVRQ TVIAVAELAF QCLQSDKDLR
601: PCMSHVQDTL TRIQNNGFGS EMDVVDVNKS GPLVAQSPDS VIVKWDSK

Arabidopsis Description

Protein kinase superfamily protein [Source:TAIR;Acc:AT1G18390]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.