CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96118	Canola	cytosol	22.01	20.83
CDY48385	Canola	plasma membrane	64.78	17.2
CDY23541	Canola	plasma membrane	64.78	17.2
CDX73519	Canola	mitochondrion	28.93	13.61
PGSC0003DMT400014680	Potato	cytosol	27.67	12.43
PGSC0003DMT400040920	Potato	mitochondrion	28.3	11.66
CDY65028	Canola	plasma membrane	29.56	10.47
CDY50595	Canola	plasma membrane	30.82	9.39
CDY52471	Canola	cytosol, nucleus, plastid	31.45	9.29
CDX99685	Canola	cytosol, plasma membrane, plastid	31.45	9.11
CDX96117	Canola	plasma membrane	33.96	8.67
CDY58597	Canola	plasma membrane	33.33	8.48
CDY03856	Canola	plasma membrane	33.33	8.48
CDY54167	Canola	plasma membrane	32.7	8.44
CDY53844	Canola	plasma membrane	32.7	8.43
CDY01770	Canola	plasma membrane	33.33	8.4
CDY42110	Canola	plasma membrane	32.08	8.37
CDY01771	Canola	plasma membrane	33.33	8.36
CDX81871	Canola	plasma membrane	33.33	8.26
CDX84986	Canola	plasma membrane	32.08	8.1
CDY38944	Canola	plasma membrane	34.59	8.08
CDX89573	Canola	plasma membrane	33.96	7.91
CDY21708	Canola	plasma membrane	32.08	7.83
CDY61885	Canola	plasma membrane	32.08	7.74
CDY68677	Canola	plasma membrane	33.96	7.71
CDY50593	Canola	plasma membrane, plastid	34.59	7.64
CDY52891	Canola	plasma membrane	33.33	7.58
CDX86810	Canola	plasma membrane	32.7	7.5
CDY52892	Canola	plasma membrane	32.7	7.46
CDY54025	Canola	plasma membrane	30.82	7.46
Solyc12g036330.1.1	Tomato	plasma membrane	30.19	7.37
CDY46073	Canola	plasma membrane	33.96	7.35
CDX96120	Canola	plasma membrane	33.33	7.21
PGSC0003DMT400014682	Potato	plasma membrane	30.19	7.14
Solyc03g119240.2.1	Tomato	plasma membrane	30.19	7.13
PGSC0003DMT400014683	Potato	plasma membrane	29.56	7.05
CDX74541	Canola	cytosol, nucleus, plasma membrane	32.08	6.12
CDY01682	Canola	plasma membrane	31.45	5.98
CDY26166	Canola	plasma membrane	31.45	5.76
VIT_17s0000g03340.t01	Wine grape	plasma membrane	31.45	5.2
KRH72047	Soybean	cytosol	1.26	5.13
CDY12594	Canola	plasma membrane	33.96	4.85
CDY10472	Canola	plasma membrane	29.56	4.76
CDY40328	Canola	cytosol, nucleus, plasma membrane	29.56	4.74
KRH39159	Soybean	extracellular	1.89	1.21
CDX96119	Canola	cytosol	5.03	0.72

Protein Annotations

Gene3D:1.10.510.10	MapMan:50.2.7	GO:A0A078GEM3	UniProt:A0A078GEM3	EnsemblPlants:CDY23537	ProteinID:CDY23537
ProteinID:CDY23537.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00022183001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF00069	PFscan:PS50011	PANTHER:PTHR27005	PANTHER:PTHR27005:SF56	InterPro:Prot_kinase_dom	SUPFAM:SSF56112
UniParc:UPI0004EDC59E	SEG:seg	:	:	:	:

Description

BnaC06g25060DBnaC06g25060D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GEM3]

Coordinates

chrLK032144:-:456804..457591

Molecular Weight (calculated)

17960.4 Da

IEP (calculated)

8.823

GRAVY (calculated)

-0.096

Length

159 amino acids

Sequence
(BLAST)

001: MPSRLQCFLF CLSGSLPAVS DEPSRRFGSE PQRSVGISNI AASFFFLFPS ISSSSFQTWV GDFGLSRLLV YSETTVNSAS SSDYVCTGPQ GTPGYLDPDY
101: HRSFRLTEKS DVYSYGVVLM ELMTRMNAVD QRRKKRDMAL AELFVSSSKW VFWIRLLTR

Best Arabidopsis Sequence Match ( AT1G69910.1 )
(BLAST)

001: MSQPPWRCFS LLIFVLTIFS TKPSSASTSC SSSFHCPPFN SSPPYPFSAS PGCGHPNFQI QCSSSRATIT IKNLTFSILH YSSISSSLTL SPITNTNRNT
101: NNCSSLRFSS SPNRFIDLTG SPFRVSDSSC SRLSLLRPCS PFTLPNCSRC PWDCKLLKNP GRILHGCEST HGSLSEQGCQ GDLLGFLQDF FTRFGFEVEW
201: DESQDPYFIK CRDCQIKNGV CGFNSTHPNQ DFICFHKSRS ELVTQRDNNK RVNHIAVLSL IFALTCLLLV FSVAVAIFRS RRASFLSSIN EEDPAALFLR
301: HHRSAALLPP VFTFEELESA TNKFDPKRKI GDGGFGSVYL GQLSDGQLLA VKFLHHHHGA TAAATEHCKA FSMKSFCNEI LILSSINHPN LVKLHGYCSD
401: PRGLLLVHDY VTNGTLADHL HGRGPKMTWR VRLDIALQTA LAMEYLHFDI VPPVVHRDIT SSNIFVEKDM KIKVGDFGLS RLLVFSETTV NSATSSDYVC
501: TGPQGTPGYL DPDYHRSFRL TEKSDVYSYG VVLMELITGM KAVDQRREKR DMALADLVVS KIQMGLLDQV IDPLLALDGD DVAAVSDGFG VAAVAELAFR
601: CVATDKDDRP DAKEIVQELR RIRSHTRVAD DDVAKN

Arabidopsis Description

LRK10L-1.5LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.5 [Source:UniProtKB/Swiss-Prot;Acc:F4I3V3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.