CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 3
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 6
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48385	Canola	plasma membrane	97.16	97.16
AT1G69910.1	Thale cress	plasma membrane	87.15	82.08
CDY23537	Canola	plastid	17.2	64.78
VIT_01s0026g01420.t01	Wine grape	plasma membrane	64.27	60.16
PGSC0003DMT400058195	Potato	plasma membrane	62.44	58.44
KRH69398	Soybean	plasma membrane	57.6	56.1
GSMUA_Achr5P14980_001	Banana	plasma membrane	38.56	45.74
HORVU5Hr1G107330.1	Barley	plasma membrane	33.22	45.43
TraesCS5A01G449000.1	Wheat	plasma membrane	32.89	44.98
TraesCS5B01G456400.1	Wheat	plasma membrane	33.06	44.7
TraesCS5B01G453800.1	Wheat	plasma membrane	33.06	44.59
EER93266	Sorghum	plasma membrane	32.55	44.32
TraesCS5D01G455500.1	Wheat	plasma membrane	32.89	44.27
Zm00001d034495_P001	Maize	plasma membrane	32.05	44.14
CDX73519	Canola	mitochondrion	20.37	36.09
CDX96118	Canola	cytosol	9.35	33.33
CDY65028	Canola	plasma membrane	24.04	32.07
CDY50595	Canola	plasma membrane	26.54	30.46
CDX96117	Canola	plasma membrane	30.72	29.53
CDX99685	Canola	cytosol, plasma membrane, plastid	26.71	29.14
CDY52471	Canola	cytosol, nucleus, plastid	25.88	28.81
CDY01770	Canola	plasma membrane	30.22	28.68
CDX81871	Canola	plasma membrane	30.72	28.66
CDY58597	Canola	plasma membrane	29.72	28.48
CDY01771	Canola	plasma membrane	30.05	28.39
CDY03856	Canola	plasma membrane	29.38	28.16
CDY21708	Canola	plasma membrane	30.55	28.11
CDY42110	Canola	plasma membrane	28.21	27.75
CDX84986	Canola	plasma membrane	28.38	26.98
CDY61885	Canola	plasma membrane	29.38	26.71
CDY52892	Canola	plasma membrane	30.72	26.4
CDX86810	Canola	plasma membrane	30.22	26.12
CDY52891	Canola	plasma membrane	30.38	26.04
CDY53844	Canola	plasma membrane	26.54	25.77
CDY54167	Canola	plasma membrane	26.38	25.65
CDY54025	Canola	plasma membrane	28.05	25.57
CDY50593	Canola	plasma membrane, plastid	30.38	25.28
CDY38944	Canola	plasma membrane	28.38	24.96
CDX96120	Canola	plasma membrane	30.38	24.76
CDX89573	Canola	plasma membrane	27.88	24.45
CDY68677	Canola	plasma membrane	28.55	24.43
CDY46073	Canola	plasma membrane	28.55	23.27
CDY26166	Canola	plasma membrane	30.72	21.2
CDX74541	Canola	cytosol, nucleus, plasma membrane	29.05	20.89
CDY01682	Canola	plasma membrane	28.88	20.69
CDY12594	Canola	plasma membrane	31.55	16.98
CDY10472	Canola	plasma membrane	27.21	16.51
CDY40328	Canola	cytosol, nucleus, plasma membrane	27.21	16.43
CDX96119	Canola	cytosol	19.53	10.58

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.20	Gene3D:3.30.200.20	GO:A0A078GDX8	UniProt:A0A078GDX8	EnsemblPlants:CDY23541
ProteinID:CDY23541	ProteinID:CDY23541.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00022188001	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00109	PFscan:PS50011	PANTHER:PTHR27005
PANTHER:PTHR27005:SF56	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	SignalP:SignalP-noTM	InterPro:Tyr_kinase_AS
UniParc:UPI0004EDDACA	SEG:seg	:	:	:	:

Description

BnaC06g25100DBnaC06g25100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GDX8]

Coordinates

chrLK032144:-:476254..478122

Molecular Weight (calculated)

66267.9 Da

IEP (calculated)

7.149

GRAVY (calculated)

-0.167

Length

599 amino acids

Sequence
(BLAST)

001: MSQSPSSSRR CFSLLILILI LTIVKTYSSS CSSSSTSFHC PPFNSSPPFP FSTSPGCGHP HFQIQCSSPR ATISVKNLTF SLLHYSSLSS SLTLSPQLGS
101: NQNNCSSLRF SSSPNRFIDL TGSPFRVSDS SCSRLSLLRP CSPLTLPNCS RCPQDCKVVK NPGRILHGCE STHGSLSEQG CQGDLLSFLQ DFFTRFGFEV
201: EWDESQDPYF AKCRDCRVKN GVCGFNSTHP SQDFICFSPQ RETTVNHVAV LCLIFALTFN EEDPAALFLR RHRSAALLPP VFTFEELESA TNKFDPKRKI
301: GDGGFGSVYL GQLADGQLLA VKFLHHHHGA TAADTEHCKA FSMKSFCNEI LILSSINHPN LVKLHGYCSD PRGLLLVHDY VTNGTLADHL HGRKSAMTWR
401: IRLDIALQTA LAMEYLHFSI TPPVVHRDIT SSNIFVEKDM RIKVGDFGLS RLLVFSETTV NSASSSDYVC TGPQGTPGYL DPDYHRSFRL TEKSDVYSYG
501: VVLMELMTGM KAVDQRREKR DMALAELFVS KLQMGLLDQV VDPLIASDDD DGGVAAVAEL AFRCVAVDKD DRPDAKEIVG ELRRIKSRTR IGEDDVTKC

Best Arabidopsis Sequence Match ( AT1G69910.1 )
(BLAST)

001: MSQPPWRCFS LLIFVLTIFS TKPSSASTSC SSSFHCPPFN SSPPYPFSAS PGCGHPNFQI QCSSSRATIT IKNLTFSILH YSSISSSLTL SPITNTNRNT
101: NNCSSLRFSS SPNRFIDLTG SPFRVSDSSC SRLSLLRPCS PFTLPNCSRC PWDCKLLKNP GRILHGCEST HGSLSEQGCQ GDLLGFLQDF FTRFGFEVEW
201: DESQDPYFIK CRDCQIKNGV CGFNSTHPNQ DFICFHKSRS ELVTQRDNNK RVNHIAVLSL IFALTCLLLV FSVAVAIFRS RRASFLSSIN EEDPAALFLR
301: HHRSAALLPP VFTFEELESA TNKFDPKRKI GDGGFGSVYL GQLSDGQLLA VKFLHHHHGA TAAATEHCKA FSMKSFCNEI LILSSINHPN LVKLHGYCSD
401: PRGLLLVHDY VTNGTLADHL HGRGPKMTWR VRLDIALQTA LAMEYLHFDI VPPVVHRDIT SSNIFVEKDM KIKVGDFGLS RLLVFSETTV NSATSSDYVC
501: TGPQGTPGYL DPDYHRSFRL TEKSDVYSYG VVLMELITGM KAVDQRREKR DMALADLVVS KIQMGLLDQV IDPLLALDGD DVAAVSDGFG VAAVAELAFR
601: CVATDKDDRP DAKEIVQELR RIRSHTRVAD DDVAKN

Arabidopsis Description

LRK10L-1.5LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.5 [Source:UniProtKB/Swiss-Prot;Acc:F4I3V3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.