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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, nucleus, plastid

Predictor Summary:
  • nucleus 2
  • cytosol 1
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, plastid
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX99685 Canola cytosol, plasma membrane, plastid 92.38 90.53
Bra025433.1-P Field mustard cytosol, plasma membrane, plastid 93.12 87.13
HORVU7Hr1G066130.1 Barley plasma membrane 20.63 66.07
CDX96118 Canola cytosol 20.63 66.07
CDY50595 Canola plasma membrane 60.97 62.84
HORVU6Hr1G080640.1 Barley cytosol 31.41 58.48
GSMUA_Achr3P29460_001 Banana cytosol 33.09 57.23
CDY50593 Canola plasma membrane, plastid 76.39 57.08
AT5G38210.2 Thale cress plasma membrane 72.3 55.73
Os04t0113100-00 Rice cytosol 31.97 55.66
HORVU5Hr1G110430.1 Barley mitochondrion 32.16 54.75
GSMUA_Achr4P13730_001 Banana plasma membrane 37.73 53.56
CDY01771 Canola plasma membrane 61.34 52.05
CDY01770 Canola plasma membrane 60.59 51.66
CDX96117 Canola plasma membrane 59.29 51.2
GSMUA_Achr3P01480_001 Banana plasma membrane 33.27 50.14
GSMUA_Achr1P23150_001 Banana golgi, plasma membrane, plastid 37.73 48.8
TraesCSU01G238700.1 Wheat mitochondrion, plasma membrane 38.29 48.24
CDY52891 Canola plasma membrane 62.27 47.93
CDY52892 Canola plasma membrane 60.97 47.06
CDY01682 Canola plasma membrane 72.12 46.41
GSMUA_Achr6P09830_001 Banana plasma membrane 36.62 45.71
CDY65028 Canola plasma membrane 37.73 45.21
CDX74541 Canola cytosol, nucleus, plasma membrane 69.89 45.14
CDX96120 Canola plasma membrane 61.52 45.03
CDX86810 Canola plasma membrane 57.81 44.88
CDY61885 Canola plasma membrane 53.72 43.85
GSMUA_Achr10P... Banana plastid 33.83 42.82
VIT_14s0006g02600.t01 Wine grape plasma membrane 46.47 41.53
CDX73519 Canola mitochondrion 23.98 38.17
KRH01725 Soybean plasma membrane 47.21 37.46
CDY42110 Canola plasma membrane 41.82 36.95
Zm00001d009473_P001 Maize cytosol 41.26 36.69
KRH70404 Soybean plasma membrane 46.47 36.66
TraesCS3A01G048700.1 Wheat plasma membrane 39.03 36.59
CDX84986 Canola plasma membrane 42.57 36.35
CDX81871 Canola plasma membrane 43.31 36.29
CDY58597 Canola plasma membrane 42.01 36.16
CDY03856 Canola plasma membrane 41.82 36.0
TraesCS3A01G034300.1 Wheat plasma membrane 43.31 35.9
TraesCS3B01G053800.1 Wheat vacuole 42.94 35.65
TraesCS3D01G046000.1 Wheat plasma membrane 42.75 35.55
TraesCS3D01G045400.2 Wheat plasma membrane 42.57 35.39
PGSC0003DMT400067835 Potato plasma membrane 46.28 35.37
CDY21708 Canola plasma membrane 42.75 35.33
Zm00001d008581_P001 Maize plasma membrane 42.19 34.71
TraesCS3A01G034600.1 Wheat plasma membrane 42.94 34.58
Os01t0689900-03 Rice plasma membrane 44.8 34.58
OQU87357 Sorghum vacuole 45.17 34.37
HORVU3Hr1G064110.3 Barley plasma membrane 44.8 33.9
Os01t0136400-01 Rice plasma membrane 42.01 33.83
TraesCS3B01G049700.2 Wheat plasma membrane 39.96 33.75
TraesCS3B01G295500.1 Wheat plasma membrane 43.68 33.43
TraesCS3D01G262300.2 Wheat plasma membrane 43.68 33.38
TraesCS3A01G262200.1 Wheat plasma membrane 43.49 33.33
Os05t0550800-01 Rice plasma membrane 42.19 33.19
Zm00001d011625_P001 Maize extracellular 44.24 33.15
TraesCS3D01G046900.2 Wheat plasma membrane 39.59 32.97
GSMUA_Achr9P21440_001 Banana plastid 40.33 32.78
EES02528 Sorghum mitochondrion, plasma membrane 39.22 32.46
Os01t0136800-01 Rice plasma membrane 40.15 32.43
KXG22487 Sorghum plasma membrane 41.82 32.42
TraesCS1A01G374700.1 Wheat plasma membrane 40.33 32.34
TraesCS1B01G394900.1 Wheat plasma membrane 40.71 32.02
TraesCS1D01G381800.1 Wheat plasma membrane 40.89 31.98
HORVU3Hr1G006830.22 Barley plasma membrane 40.71 31.97
Zm00001d039926_P001 Maize vacuole 39.96 31.76
TraesCS3A01G033700.1 Wheat plastid 39.96 31.71
HORVU1Hr1G083220.3 Barley plastid 42.19 31.48
CDY23537 Canola plastid 9.29 31.45
KXG31948 Sorghum plasma membrane 40.15 31.4
CDY12594 Canola plasma membrane 64.68 31.27
Solyc02g086270.2.1 Tomato plasma membrane 44.61 30.97
TraesCS3D01G048000.1 Wheat plasma membrane 38.29 30.88
Zm00001d038915_P001 Maize plasma membrane 39.96 30.76
TraesCS3D01G030600.1 Wheat plastid 38.85 30.74
HORVU3Hr1G007540.1 Barley plasma membrane, plastid 32.9 30.57
TraesCSU01G047400.1 Wheat plasma membrane 38.1 30.42
TraesCS3A01G033000.1 Wheat plasma membrane 38.1 30.24
GSMUA_Achr2P22610_001 Banana plasma membrane 38.29 29.01
CDY54167 Canola plasma membrane 31.23 27.27
CDY53844 Canola plasma membrane 31.04 27.07
CDY26166 Canola plasma membrane 42.94 26.61
CDY38944 Canola plasma membrane 33.09 26.14
CDY48385 Canola plasma membrane 29.0 26.04
CDY23541 Canola plasma membrane 28.81 25.88
CDX89573 Canola plasma membrane 32.71 25.77
Zm00001d039931_P002 Maize plasma membrane, vacuole 40.52 25.56
CDY68677 Canola plasma membrane 32.16 24.71
CDY46073 Canola plasma membrane 31.78 23.27
CDY54025 Canola plasma membrane 27.7 22.68
Zm00001d043800_P003 Maize plastid 43.49 22.29
HORVU3Hr1G007590.1 Barley cytosol, plastid 22.12 16.06
CDY10472 Canola plasma membrane 28.62 15.6
CDY40328 Canola cytosol, nucleus, plasma membrane 28.62 15.52
CDX96119 Canola cytosol 29.93 14.56
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:18.4.1.20Gene3D:3.30.200.20GO:A0A078IRF6UniProt:A0A078IRF6EnsemblPlants:CDY52471ProteinID:CDY52471
ProteinID:CDY52471.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00007067001InterPro:IPR000719InterPro:Kinase-like_dom_sfPFAM:PF00069PFAM:PF14380ScanProsite:PS00107
ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27005PANTHER:PTHR27005:SF13InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BS
SMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASTMHMM:TMhelixUniParc:UPI0004EEDD1DInterPro:WAK_assoc_C
SEG:seg:::::
Description
BnaA04g27950DBnaA04g27950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IRF6]
Coordinates
chrLK033093:-:68696..70906
Molecular Weight (calculated)
59650.9 Da
IEP (calculated)
8.120
GRAVY (calculated)
-0.314
Length
538 amino acids
Sequence
(BLAST)
001: MDYINDLSQK WIPSFSVSSH LYSRKREIIN ELRESCGSIV NVPVSRSALR IEERNQSAEA LTKALEKGFE LSFNRDCSRC RRSKGACGYN NTLGGFVCYC
101: INESHKHTCE KNGLTKPEKI GIGFVCGFLG ATLLAACLLC FYIRRRKKLA AQYTNKGLSA TPPTSISRSN HALMPSSISN LPNRSVDYGV QVFSYEELEE
201: ATDHFSRELG DGGFSTVYYG ILKDGRAVAV KRFFEKSLKR VEQFKNEINI LKSLKHPHLV ILYGCTTRHS RELLLVYEYI ANGTLADNLH GDQAQSRPIS
301: WPGRLNIAIQ TASALSFLHA SGIIHRDVKT TNILLDSNYQ VKVADFGLSR LFPPDLSHIS TGPQGTPGYV DPEYYQCYRL NEKSDVYSFG VVLSELISSK
401: KAVDITRSRE DINLANMAIS KIGNDSVHEL ADLSLGFARD PSVNRMMISV AELAFGCLQQ EREARPSMDE VVKVLREIQK EGESDAPGVV EVEVRSGDEA
501: ALLNHGVPPV LSPVSEKETS GSNTTTTSSS SRTRKSSF
Best Arabidopsis Sequence Match ( AT1G66880.1 )
(BLAST)
0001: MKNMNFERLS ELMAFYHLMG KISSECGNIT AGFPFWGGNR LKHCGLPSLE LHCSKNITSL FISSQEFYVL HLNQTSKTLK LARTDLLGSI CNSTFTTITL
0101: PPNIFELSPT YKRLTVFYYC FLLTHYVSSY KCPMRGFIFV SENHEYHKIC GDTFTVIVPT RFGAGEKELN MTNLESVLSK GFEVKVKIDD TSCQECLSSH
0201: GSCGFNETLP VGGKCSPLNP TTQPPPQPGD RHKHCGHPLL ELRCDQNKST SLFISDQEFF VLHVDQTSYS LTLARPDLLH SFCSLTFTNT TLPPEIFELS
0301: PAYKSVTFYH CYPVLPDLSN YTCPVIGPIS VSGNPEDHET CFPNFAANVP TSFVTKEKKL NIANLESVLE KGFEVNMNVI MKACQACSYS NESCGFDENF
0401: PFEVKCKPHH SPTAKFQCGN ITAGFPFSGG NRPQICGHPS LELHCYNNMA SIIISDHFYN VLHIDQTSNT LRLARAELEG SFCNATYTAT TLPSKIFEIS
0501: STYKSLTVFY LCDPKVSYRS SYTCPGRGLV SVSQNSDYHN SCQDSFTINV PKSFVPEEKE LDVTNLESAL REGFEVKVKV DEKTCQKCTS SGGTCGFQNS
0601: TQICCKEASS LGCNKVHPLP DATELELHRR CNGTFSCGDQ RELFYPFWTS GREDCGHPDF KLDDCSGRFA ELSISSVKFR ILASVYGSNI IRLGRSEYIG
0701: DLCPQDPINA PFSESVLPFA PNTELLTIFY NCSRDFPQQV TNFGDFACGD DSDDDRSYYV TRNLSFPPLS EINDLLYDFS QSCDRNVSIP ASGSTLNILQ
0801: STPSNDNLKK ALEYGFELEL NQDCRTCIDS KGACGYSQTS SRFVCYSIEE PQTPTPPNPT RNKDTSLSIG AKAGIAVASV SGLAILLLAG LFLCIRRRRK
0901: TQDAQYTSKS LPITSYSSRD TSRNPTSTTI SSSSNHSLLP SISNLANRSD YCGVQVFSYE ELEEATENFS RELGDGGFGT VYYGVLKDGR AVAVKRLYER
1001: SLKRVEQFKN EIEILKSLKH PNLVILYGCT SRHSRELLLV YEYISNGTLA EHLHGNRAEA RPLCWSTRLN IAIETASALS FLHIKGIIHR DIKTTNILLD
1101: DNYQVKVADF GLSRLFPMDQ THISTAPQGT PGYVDPEYYQ CYQLNEKSDV YSFGVVLTEL ISSKEAVDIT RHRHDINLAN MAVSKIQNNA LHELVDSSLG
1201: YDNDPEVRRK MMAVAELAFR CLQQERDVRP AMDEIVEILR GIKDDEKKRV LVKSPDVVDI ECGGGDDVGL LRNSVPPPIS PETDKWTSSS DTAASL
Arabidopsis Description
Protein kinase superfamily protein [Source:TAIR;Acc:AT1G66880]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.